mRNA_Ecto-sp13_S_contig8479.19867.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig8479.19867.1
Unique Name	mRNA_Ecto-sp13_S_contig8479.19867.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 4.100e-81
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 3

Query:    3 TDTMALLDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS 425
            TDTMALLDCSLRRPVNERLETLGDAWLNYYAGFV   DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS
Sbjct: 1798 TDTMALLDCSLRRPVNERLETLGDAWLNYYAGFV---DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS 1935

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 3.070e-72
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 3

Query:   42 PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL
Sbjct: 1162 PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 1283

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 175 bits (444), Expect = 3.750e-48
Identity = 78/93 (83.87%), Postives = 91/93 (97.85%), Query Frame = 3

Query:    6 DTMALLDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLP 284
            DT++LLDCSLRRP+NERLETLGDAWLN+YAGFV+FQDKPV+ EEGMMT LRKN+VSNARL+KCADGRGLREF+YPPR+ILG+PF+MW+PSLLP
Sbjct: 1026 DTLSLLDCSLRRPINERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTFLRKNIVSNARLVKCADGRGLREFIYPPRTILGQPFEMWAPSLLP 1118

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A835Z3Y3_9STRA (Ribonuclease III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.460e-27
Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 3

Query:   21 LDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPF-DMWSPSLLPLPPP-VKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLES 422
            ++ ++RRP NERLETLGDAWL  Y    + Q +P+L EEG+++  R N+V NARL K A    L  +M+P RS+LGRPF + W P+L+  P P  +   KT AD VEA+LG  L+ GG  +   ++ ++GLPTL +
Sbjct:   53 VEVAVRRPANERLETLGDAWLKAYMCLFIMQTRPILQEEGLISEFRSNLVCNARLTKEAVKCDLVSYMHPLRSMLGRPFLEHWMPALMAPPSPGPQVGWKTPADCVEAILGCCLILGGEAAPQAMLRFVGLPTLSN 188

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A371H3C5_MUCPR (Endoribonuclease Dicer-like 2 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H3C5_MUCPR)

HSP 1 Score: 63.9 bits (154), Expect = 4.140e-9
Identity = 49/141 (34.75%), Postives = 67/141 (47.52%), Query Frame = 3

Query:   51 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPV----------------------KASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            E LETLGD++L Y A   +FQ  P    EG++++ R+ ++SNA L K     GL  F      I   PFD   P+   +P                         K  +K +ADVVEAL+GA L  GG  SA   M+W+G+
Sbjct:  936 ESLETLGDSFLKYAASQQLFQTYPN-HHEGLLSVKREKIISNASLCKLGCSSGLPGF------IRNEPFD---PNTWTIPGDKSGNFKLEELDTKGGKFYVSGKRKLKRKIVADVVEALIGAFLSTGGENSALLFMDWVGI 1066

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A6P9EP69_JUGRE (endoribonuclease Dicer homolog 2-like n=2 Tax=Juglans TaxID=16718 RepID=A0A6P9EP69_JUGRE)

HSP 1 Score: 63.5 bits (153), Expect = 5.380e-9
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 3

Query:   51 ERLETLGDAWLNYYAG---FVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFM----YPPRS--ILGRPFD-------MWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            E LETLGD++L Y      F  +QD+P    EG++T  R+ ++SNA L +    R L  F+    + P+   ILG           +++   + +    K   KT+ADVVEAL+GA L  GG  SA   MEWLG+
Sbjct:  374 ESLETLGDSFLKYAVSQQLFKTYQDQP----EGVLTSKREKIISNAALCEFGCYRKLPGFIQNESFDPKKWIILGDRLGSASSEELLFNTRKIYIRETRKMESKTVADVVEALIGAFLSIGGETSALLFMEWLGI 504

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: UPI001BF81857 (Uncharacterized protein n=5 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF81857)

HSP 1 Score: 63.2 bits (152), Expect = 7.320e-9
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 3

Query:   51 ERLETLGDAWLNYYAG---FVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYP----------PRSILGRPFD---MWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            E LETLGD++L Y      F  +QD+P    EG++T  ++ ++SNA L +    R L  F+            P   LG       +++   + +    K   KT+ADVVEAL+GA L  GG  SA   MEWLG+
Sbjct:  365 ESLETLGDSFLKYAVSQQLFKTYQDQP----EGVLTSKKEKIISNAALCEFGSHRKLPGFIRDESFNPKKWIIPGDRLGSALSEELLFNTRKIYIRETRKMESKTVADVVEALIGAFLSIGGETSALLFMEWLGI 495

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A484NRK6_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484NRK6_9ASTE)

HSP 1 Score: 63.2 bits (152), Expect = 7.770e-9
Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 3

Query:   51 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGL----REFMYPPRSI--LGRPF-----DMWSPSLLPLPPPVKAS---------------KKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            ERLE LGDA+L +  G  +F     L +EG +T  R N+V+N+ L K A   GL    R+ ++ P     LGRP      +  + ++  L    K                 KKTIADVVEAL+GA +V GG ++A   ++W+G+
Sbjct: 1021 ERLEVLGDAFLKFSVGRSIFLSNKAL-DEGQLTNRRSNIVNNSNLHKLAIKSGLQAYIRDHIFAPDQFYALGRPCPVICSEQTADTIHMLSSTEKNGANAEAKCSKSHHWLMKKTIADVVEALIGAFIVDGGFKAATAFLKWIGI 1164

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: UPI0010A4A3BA (endoribonuclease Dicer homolog 2 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4A3BA)

HSP 1 Score: 62.8 bits (151), Expect = 1.050e-8
Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 3

Query:   51 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFD--MW-----SPSLLPLPPPV-------------KASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            E LETLGD++L Y AG  ++Q  P    EG++++ +  ++SNA L K    RGL  F      I   PFD   W         + L   +             K   K IADVVEAL+GA L  GG ++A   M+W+G+
Sbjct:  977 ESLETLGDSFLKYAAGQYLYQIYPTY-HEGLLSVKKDKIISNAALRKLGCSRGLTGF------IRNSPFDPHKWIIPGDRSGCVSLTEELASDMTKIYVNGNRKIKPKVIADVVEALIGAFLSTGGEKAAFRFMDWVGI 1108

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BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: K7LBG6_SOYBN (Uncharacterized protein n=8 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7LBG6_SOYBN)

HSP 1 Score: 62.4 bits (150), Expect = 1.430e-8
Identity = 51/138 (36.96%), Postives = 69/138 (50.00%), Query Frame = 3

Query:   51 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFD--MWS-----PSLLPLPPPV------------KASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 407
            E LETLGD++L Y A   +F+       EG++++ R+ ++SNA L K     GL  F      I   PFD   W+     P  L L   V            K ++K IADVVEAL+GA L  GG  SA   M+W+G+
Sbjct: 1025 ESLETLGDSFLKYAASQQLFKTYKN-HHEGLLSVKREKIISNAALCKLGCSSGLPGF------IRNEPFDPHAWTIPGDKPESLKLEELVIKGKKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGI 1155

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQM7_9PHAE	4.100e-81	97.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZW2_ECTSI	3.070e-72	100.00	Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=...	[more]
A0A2S1PRV6_FUCSE	3.750e-48	83.87	Putative dicer (Fragment) n=1 Tax=Fucus serratus T...	[more]
A0A835Z3Y3_9STRA	1.460e-27	46.32	Ribonuclease III domain-containing protein n=1 Tax...	[more]
A0A371H3C5_MUCPR	4.140e-9	34.75	Endoribonuclease Dicer-like 2 (Fragment) n=1 Tax=M...	[more]
A0A6P9EP69_JUGRE	5.380e-9	37.04	endoribonuclease Dicer homolog 2-like n=2 Tax=Jugl...	[more]
UPI001BF81857	7.320e-9	35.56	Uncharacterized protein n=5 Tax=Carya illinoinensi...	[more]
A0A484NRK6_9ASTE	7.770e-9	35.17	Uncharacterized protein n=3 Tax=Cuscuta sect. Clei...	[more]
UPI0010A4A3BA	1.050e-8	35.25	endoribonuclease Dicer homolog 2 n=1 Tax=Prosopis ...	[more]
K7LBG6_SOYBN	1.430e-8	36.96	Uncharacterized protein n=8 Tax=Glycine subgen. So...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8479	contig	Ecto-sp13_S_contig8479:888..4143 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	248.8
Seed ortholog evalue	1.4e-63
Seed eggNOG ortholog	2880.D7FZW2
Model size	426
KEGG ko	ko:K11592
KEGG Pathway	ko05206,map05206
Hectar predicted targeting category	other localisation
Exons	5
EggNOG free text desc.	ribonuclease III activity
EggNOG OGs	COG0571@1,KOG0701@2759
Cds size	414
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03036

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8479.19867.1	prot_Ecto-sp13_S_contig8479.19867.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig8479 888..4132 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464117.5069776-CDS-Ecto-sp13_S_contig8479:887..966	1681464117.5069776-CDS-Ecto-sp13_S_contig8479:887..966	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig8479 888..966 -
1681464117.5190368-CDS-Ecto-sp13_S_contig8479:2423..2554	1681464117.5190368-CDS-Ecto-sp13_S_contig8479:2423..2554	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig8479 2424..2554 -
1681464117.5287702-CDS-Ecto-sp13_S_contig8479:2873..2975	1681464117.5287702-CDS-Ecto-sp13_S_contig8479:2873..2975	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig8479 2874..2975 -
1681464117.53812-CDS-Ecto-sp13_S_contig8479:3641..3714	1681464117.53812-CDS-Ecto-sp13_S_contig8479:3641..3714	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig8479 3642..3714 -
1681464117.547167-CDS-Ecto-sp13_S_contig8479:4103..4132	1681464117.547167-CDS-Ecto-sp13_S_contig8479:4103..4132	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig8479 4104..4132 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464117.5566182-UTR-Ecto-sp13_S_contig8479:4132..4143	1681464117.5566182-UTR-Ecto-sp13_S_contig8479:4132..4143	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig8479 4133..4143 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig8479:888..4143-
coding sequence from alignment at Ecto-sp13_S_contig8479:888..4143-

protein sequence of mRNA_Ecto-sp13_S_contig8479.19867.1

>prot_Ecto-sp13_S_contig8479.19867.1 ID=prot_Ecto-sp13_S_contig8479.19867.1|Name=mRNA_Ecto-sp13_S_contig8479.19867.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MALLDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRK
NVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASK
KTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS

mRNA from alignment at Ecto-sp13_S_contig8479:888..4143-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig8479.19867.1 ID=mRNA_Ecto-sp13_S_contig8479.19867.1|Name=mRNA_Ecto-sp13_S_contig8479.19867.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3256bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8479:888..4143- (Ectocarpus species13 EcNAP12_S_4_19m)
TTACCGATACCATGGCGCTGCTCGACTGCTCGCTTCGCAGGTGAGACTGA
CGCGGGGGAGGTCCACTCCCTTGATGAAGCAGCTCGGTTGAGAGTCGGAA
GCGCGACATGGCACTGGAAGCCGATCCCATCGGATACGAAATGAAACCAA
CGTGTGGCCCCTCGCATCGTTTCTTCGTACTGCCCGATGGAAACGCGTAC
CTTCTGCCGTAGAATGGCCTTGCCGATTCTAGCTCTCCCCAGTTCCCCGT
CCACACCCGACTCATTCTGCCCCCGGTACTCGAGTCATCAGTACTTTGAA
CTGGGATGGATCGATTTTAAACGCGGATGGATCGATAGAACACTGTTCGC
CCCACCCCACCGTCCACTCAATCGCATTCCCGCGTGGGTTTTTGTGTTCC
CGAATGGACCAACCGAATGATGAACGCAGACCGGTGAACGAGAGACTGGA
GACGTTAGGCGACGCGTGGCTAAACTACTACGCCGGGTTCGTTGTTTTCC
AGGCAAGTGGGACGTCGTTGAATATGATCTTGTTTGGGGGGGGGTGAAGG
GGGAAGTTTGGGTCTCATTGATGCATATGGTCATGCATGCCGCCGTCATT
TGAACCGTCGACTTGGCATCTCTCCGAAGCTGGGGGCGCCACAAACGACG
GTTTCCGGACCGCCTTCGCGCAATTAGTATGTTTATGAGGAAACAGAACA
GGGAGGGGGGACACGGACCCTATCCCTAACCCTAACCCAACTTCCACGAT
TGTATGCTTTATCCCACATGCTTAGATTTTGCGCGAAACCTTTCGAAGGC
TACTGGGTTTCCCTCCGGGCCAGCGGGTGGGTGGTGGTGATCGGCGGACA
CAAAAATACGGATTTTGAGCGTGTTGTGTGTTTATCCGTATCGTTCTCGA
GGAACGAACGTCTCGCATGTTCCCGGCCGAGAAAAGGGCAGGGCGCGGCG
TCCGTTTTGGGAATGGGAAAATGACCGGGTTAATGGGACAGCGATAGTAC
ACTTCCGAACACTGCCGAAGGAGACGCTTGCATGTGTTGCGACATGTTTC
CCCGTGCCTTGTGGCTGGAGGCACTGTTTTCCGCGTGGCTTGTTCTCCTG
TAAACCCATTGGTCGCTCAAACATCAATTTCTCGAACAATTTCACTTCTT
GATGGTTCAACCAAGCAGGACAAGCCGGTGTTGATGGAGGAGGGGATGAT
GACGCTGCTCAGGAAGAACGTCGTTTCCAACGCGCGCCTCCTCAAGTGTG
CTGATGGTCGAGGCCTGAGGGTAAGCCCCACGTGTCTAGCTGCCTGCACA
TCACCAAGGACGCTTGTCTGTCCACACAATTTCCTGTCACACCGTTTACG
GAGAAGCGCATGGATCTGTTAATAGCTTCTTTACCTCCCCCGCTTCACTC
AAAGTAAACAGCTACAAAGGTGATCGCCAAGTTCGCTGATTAGTGGTCTG
CGGCAGGTATCAGAAACATCGATGTATTCATATCCGTTTCATATTTGACG
TTCACCAGGGAGACGCAGTCCGTGGGAAGCTCAAAAACTCGAATGCGGAC
ACGACGAACTAACGGCCTCGGCTACTCTTACGTCGGCAGGAGTTCATGTA
CCCTCCGCGGTCTATTCTTGGACGGCCTTTCGACATGTGGTCTCCTTCTC
TCCTGCCTCTTCCGCCTCCCGTGAAGGCCAGCAAGAAGACCATCGCTGAC
GTTGTCGAAGCCCTCCTAGGGTGAGCGTAGGTACACGATCGGAGATTTAG
CGCCGGAGTTCTCGGGATACTTTGATGCTGTTGGGACGAAACCGGACGTT
GTCCACCTGCGTTGCAGCCCGTGGAAAAATGGGCCTTTTTTGTTGTTCCT
GACGCCAAACACGATGGCATGGTGCCCCCTTTACTCTTTTTTGTATTGGG
CTTGAGGTTATCTTGGAACAGCTCTGGCTGTAGTGCCGCTCCAAAATTTT
AGATCACGACATCGCAATCTGTGGTGCCCAAACTACGCTGTCCCCGAACG
CCAGTGATTTTCACGTACTTTCCGGACCGCGACAGCGTTGCAAAGTCTGG
CCAGAGGCTCCGTGATGACATAAAAATGGAGACGTGGACGTTTTTTTTCG
ACGCACTAATTGCGCCGCTGCCAACTCCTCGTGTTTAGAGGCAGTCAGGT
GTCGATTCTAGGTGACCTTTGCAGACCCATGGAGGGCGAAATGATGCTGA
TCCAAAACTCTAGATTTTTGCGTTGAGTTCTGTGGTTATCCTTCTACCGT
GGGGCGAAGTCACGAACGACGTAGTCCGGTTTTCGGACCGCGACGGCCTG
GGGAAGTTTGCGGCCAAGAGAGCTGAAAAACATGGCGTTCGCAACAGCAA
CCGATCGGCGTGATGAAGCAAATCTCGAGCTAAGAGCAAAAACACGGCGT
GAAAACTGCTTGCAGACGTACGTTGAAACTATGTTGGACTGGTCTGCCAG
TTTCATGGAGATCCGCGGTCTGTGCCAGTAGTGCCAGTGGTGGCTAACAG
GGTGATGTGGGGTGGGCTGAGCAGCAAAAACTCAGAGGGGTTCCGGAAAA
TCGTGGAGGTACCCAGTATATTTTTGGCGGCATGTTTTTTTTAACTTCCG
TGGGCTGCAACGCAGGTGGTCGGAGTGATTCTGCTTCCAAACAGTTCGAG
TTTCAGAGGGCAGCCGTATCGGACTCTGTCACAGCTGTGCTTGGATGATA
CCAAACACCCGAGCTGTGGAAGAAGCGCCGATGCGAATGGGAATACCTTT
AGACTATCGAATGTATTTTTTGACACGAATAGCTTGCTTAGTTGCGTGTC
GGGGTGAGAATACAACTCGCAGATGGAGAGATACGGCGCGTTCCGCTGCA
TCCATTTGTCAAGCGGCCTGTTTCCACCCCTGTAGAACTGGTACGTCGCA
ACATATGTTCACTTGCAAGGAGTCACGAAATACGTTATGAGGAGACTTTT
GGTTAGGGTTAGTCTTTCGTCGTCCTTGTGTCCTTCTTAAGGGTGCATCG
CGGCCGTTTGCCGAGGAATGAATATGCAGGCAACTAGGCGGACACAGCGC
TTGCACAGCGAGGGACAAAAATGTCGGGGCAAGATGAAAACTCACCCATG
ACCGTTCGCACGCTTTTGTTTTGAATGCTTCCTTTTTTGTCCATCTGTGC
CACGATCGCTTGCCCGCGAAAAAACAGAGCGGCGCTCGTTGCGGGTGGCA
ACCGCAGCGCGGCGTACATCATGGAGTGGCTCGGCCTGCCCACCCTCGAG
TCGTCC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8479:888..4143-

>mRNA_Ecto-sp13_S_contig8479.19867.1 ID=mRNA_Ecto-sp13_S_contig8479.19867.1|Name=mRNA_Ecto-sp13_S_contig8479.19867.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8479:888..4143- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGCTGCTCGACTGCTCGCTTCGCAGACCGGTGAACGAGAGACTGGA
GACGTTAGGCGACGCGTGGCTAAACTACTACGCCGGGTTCGTTGTTTTCC
AGGACAAGCCGGTGTTGATGGAGGAGGGGATGATGACGCTGCTCAGGAAG
AACGTCGTTTCCAACGCGCGCCTCCTCAAGTGTGCTGATGGTCGAGGCCT
GAGGGAGTTCATGTACCCTCCGCGGTCTATTCTTGGACGGCCTTTCGACA
TGTGGTCTCCTTCTCTCCTGCCTCTTCCGCCTCCCGTGAAGGCCAGCAAG
AAGACCATCGCTGACGTTGTCGAAGCCCTCCTAGGAGCGGCGCTCGTTGC
GGGTGGCAACCGCAGCGCGGCGTACATCATGGAGTGGCTCGGCCTGCCCA
CCCTCGAGTCGTCC