prot_Ecto-sp13_S_contig8479.19867.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8479.19867.1
Unique Nameprot_Ecto-sp13_S_contig8479.19867.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 3.790e-79
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0
Query:    1 MALLDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS 138
            MALLDCSLRRPVNERLETLGDAWLNYYAGFV   DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS
Sbjct: 1801 MALLDCSLRRPVNERLETLGDAWLNYYAGFV---DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS 1935          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 1.990e-72
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
Query:   11 PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 132
            PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL
Sbjct: 1162 PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 1283          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 171 bits (434), Expect = 7.430e-47
Identity = 76/91 (83.52%), Postives = 89/91 (97.80%), Query Frame = 0
Query:    1 MALLDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLP 91
            ++LLDCSLRRP+NERLETLGDAWLN+YAGFV+FQDKPV+ EEGMMT LRKN+VSNARL+KCADGRGLREF+YPPR+ILG+PF+MW+PSLLP
Sbjct: 1028 LSLLDCSLRRPINERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTFLRKNIVSNARLVKCADGRGLREFIYPPRTILGQPFEMWAPSLLP 1118          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A835Z3Y3_9STRA (Ribonuclease III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.480e-28
Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 0
Query:    4 LDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPF-DMWSPSLLPLPPP-VKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLES 137
            ++ ++RRP NERLETLGDAWL  Y    + Q +P+L EEG+++  R N+V NARL K A    L  +M+P RS+LGRPF + W P+L+  P P  +   KT AD VEA+LG  L+ GG  +   ++ ++GLPTL +
Sbjct:   53 VEVAVRRPANERLETLGDAWLKAYMCLFIMQTRPILQEEGLISEFRSNLVCNARLTKEAVKCDLVSYMHPLRSMLGRPFLEHWMPALMAPPSPGPQVGWKTPADCVEAILGCCLILGGEAAPQAMLRFVGLPTLSN 188          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A371H3C5_MUCPR (Endoribonuclease Dicer-like 2 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H3C5_MUCPR)

HSP 1 Score: 63.9 bits (154), Expect = 3.770e-9
Identity = 49/141 (34.75%), Postives = 67/141 (47.52%), Query Frame = 0
Query:   14 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPV----------------------KASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 132
            E LETLGD++L Y A   +FQ  P    EG++++ R+ ++SNA L K     GL  F      I   PFD   P+   +P                         K  +K +ADVVEAL+GA L  GG  SA   M+W+G+
Sbjct:  936 ESLETLGDSFLKYAASQQLFQTYPN-HHEGLLSVKREKIISNASLCKLGCSSGLPGF------IRNEPFD---PNTWTIPGDKSGNFKLEELDTKGGKFYVSGKRKLKRKIVADVVEALIGAFLSTGGENSALLFMDWVGI 1066          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A6P9EP69_JUGRE (endoribonuclease Dicer homolog 2-like n=2 Tax=Juglans TaxID=16718 RepID=A0A6P9EP69_JUGRE)

HSP 1 Score: 63.5 bits (153), Expect = 4.900e-9
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 0
Query:   14 ERLETLGDAWLNYYAG---FVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFM----YPPRS--ILGRPFD-------MWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 132
            E LETLGD++L Y      F  +QD+P    EG++T  R+ ++SNA L +    R L  F+    + P+   ILG           +++   + +    K   KT+ADVVEAL+GA L  GG  SA   MEWLG+
Sbjct:  374 ESLETLGDSFLKYAVSQQLFKTYQDQP----EGVLTSKREKIISNAALCEFGCYRKLPGFIQNESFDPKKWIILGDRLGSASSEELLFNTRKIYIRETRKMESKTVADVVEALIGAFLSIGGETSALLFMEWLGI 504          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: UPI001BF81857 (Uncharacterized protein n=5 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF81857)

HSP 1 Score: 63.2 bits (152), Expect = 6.670e-9
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 0
Query:   14 ERLETLGDAWLNYYAG---FVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYP----------PRSILGRPFD---MWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 132
            E LETLGD++L Y      F  +QD+P    EG++T  ++ ++SNA L +    R L  F+            P   LG       +++   + +    K   KT+ADVVEAL+GA L  GG  SA   MEWLG+
Sbjct:  365 ESLETLGDSFLKYAVSQQLFKTYQDQP----EGVLTSKKEKIISNAALCEFGSHRKLPGFIRDESFNPKKWIIPGDRLGSALSEELLFNTRKIYIRETRKMESKTVADVVEALIGAFLSIGGETSALLFMEWLGI 495          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: A0A484NRK6_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484NRK6_9ASTE)

HSP 1 Score: 63.2 bits (152), Expect = 7.070e-9
Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 0
Query:   14 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGL----REFMYPPRSI--LGRPF-----DMWSPSLLPLPPPVKAS---------------KKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 132
            ERLE LGDA+L +  G  +F     L +EG +T  R N+V+N+ L K A   GL    R+ ++ P     LGRP      +  + ++  L    K                 KKTIADVVEAL+GA +V GG ++A   ++W+G+
Sbjct: 1021 ERLEVLGDAFLKFSVGRSIFLSNKAL-DEGQLTNRRSNIVNNSNLHKLAIKSGLQAYIRDHIFAPDQFYALGRPCPVICSEQTADTIHMLSSTEKNGANAEAKCSKSHHWLMKKTIADVVEALIGAFIVDGGFKAATAFLKWIGI 1164          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: UPI0010A4A3BA (endoribonuclease Dicer homolog 2 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4A3BA)

HSP 1 Score: 62.8 bits (151), Expect = 9.540e-9
Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 0
Query:   14 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFD--MW-----SPSLLPLPPPV-------------KASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL 132
            E LETLGD++L Y AG  ++Q  P    EG++++ +  ++SNA L K    RGL  F      I   PFD   W         + L   +             K   K IADVVEAL+GA L  GG ++A   M+W+G+
Sbjct:  977 ESLETLGDSFLKYAAGQYLYQIYPTY-HEGLLSVKKDKIISNAALRKLGCSRGLTGF------IRNSPFDPHKWIIPGDRSGCVSLTEELASDMTKIYVNGNRKIKPKVIADVVEALIGAFLSTGGEKAAFRFMDWVGI 1108          
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Match: UPI002008B22A (Dicer-like protein 2 n=1 Tax=Purpureocillium takamizusanense TaxID=2060973 RepID=UPI002008B22A)

HSP 1 Score: 62.8 bits (151), Expect = 9.570e-9
Identity = 50/124 (40.32%), Postives = 65/124 (52.42%), Query Frame = 0
Query:    7 SLRRPVN-ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPF--DMWSP-----SLLPLPPPVKA---SKKTIADVVEALLGAALVAGG 119
            S   PVN ERLE LGD+ L Y +      D P    EG ++  R  +++N+RL + A  +GL +F      IL RPF    W P     SL     P K    S KT+ADVVEAL+GA+ + GG
Sbjct:  989 SASEPVNYERLEFLGDSILKYCSSIQAASDHPT-WPEGYLSFFRDRLIANSRLCRAALDKGLAKF------ILTRPFTGQKWRPLYLDNSLHQGGKPAKGRRLSTKTLADVVEALIGASYIDGG 1105          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8479.19867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM7_9PHAE3.790e-7997.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW2_ECTSI1.990e-72100.00Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A2S1PRV6_FUCSE7.430e-4783.52Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
A0A835Z3Y3_9STRA9.480e-2846.32Ribonuclease III domain-containing protein n=1 Tax... [more]
A0A371H3C5_MUCPR3.770e-934.75Endoribonuclease Dicer-like 2 (Fragment) n=1 Tax=M... [more]
A0A6P9EP69_JUGRE4.900e-937.04endoribonuclease Dicer homolog 2-like n=2 Tax=Jugl... [more]
UPI001BF818576.670e-935.56Uncharacterized protein n=5 Tax=Carya illinoinensi... [more]
A0A484NRK6_9ASTE7.070e-935.17Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
UPI0010A4A3BA9.540e-935.25endoribonuclease Dicer homolog 2 n=1 Tax=Prosopis ... [more]
UPI002008B22A9.570e-940.32Dicer-like protein 2 n=1 Tax=Purpureocillium takam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 2..137
e-value: 0.0044
score: 15.2
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 14..119
e-value: 5.7E-14
score: 52.6
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1..119
score: 17.169
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 2..135
e-value: 2.0E-21
score: 78.3
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 12..136
NoneNo IPR availablePANTHERPTHR14950:SF37ENDORIBONUCLEASE DICERcoord: 12..134
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 12..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8479contigEcto-sp13_S_contig8479:888..4132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8479.19867.1mRNA_Ecto-sp13_S_contig8479.19867.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8479 888..4143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8479.19867.1 ID=prot_Ecto-sp13_S_contig8479.19867.1|Name=mRNA_Ecto-sp13_S_contig8479.19867.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MALLDCSLRRPVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRK
NVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASK
KTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf