mRNA_Ecto-sp13_S_contig8476.19861.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8476.19861.1
Unique NamemRNA_Ecto-sp13_S_contig8476.19861.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 737 bits (1902), Expect = 3.870e-266
Identity = 380/476 (79.83%), Postives = 385/476 (80.88%), Query Frame = 1
Query:    1 GMDALLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYT----------------------------EKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 1344
            GMDALLPATALAVALVAV E+                                         LLEDKDLEDSTSITAKQ RVDFRVPYT FLRLVALVK KNWFS A  DA G ASHPVEHKVLAWLTILGRGNCFASIYQMSWMS KTVQGMFHKFC+HFAREMYDE IHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAW RCPYNQARSYTGKEGFPTIAYQVTVDHAGRA+AVTEGFTGSTNDKTIVCWD AVEKI TDK YT                            EKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPS+YPLSENDLLFSK LESVRKDVECFFGILKGRFRILKLAM YQSQERIDNVFFTC ILHNMLHTFDGMDQLVENTNW+SSA GVGATL TEPE DCGSVGTKDVNDQPQLEI HTVRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:    5 GMDALLPATALAVALVAVHEL-----------------------------------------LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSA-GVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 642 bits (1657), Expect = 1.300e-229
Identity = 315/413 (76.27%), Postives = 348/413 (84.26%), Query Frame = 1
Query:    7 DALLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQ 1245
            DALLPATALA ALVA+DE                             R+RK+VE CAWAQ+LEDKDLEDS SI++KQFR+DFRVP +FFLRLVALVK K+WF+ +G DAA R SHPVEHKVLAWLTILGRGNCFASIYQ+SWMS KTVQ MFHKFCKHFAREMYDEHI+LP+E++G+LDHVMKQYDRLGF+GA+GSMDVTHI W +CPYN ARSYTGKEG PT+ YQVTV+HAGRA+AVTEGFT STNDKT VCWDA VEKIRTD QYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKW+IL+EP++YPLSEND+LFSK LESVRKDVECFFGILKG FRI K+AMAY  QERIDNVFFTCCILHNMLHTFDGMDQLVENT W+SSA G G  +ATE E D  +VG KD ND+
Sbjct:    8 DALLPATALAGALVALDE-----------------------------RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSA-GAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 645 bits (1663), Expect = 2.000e-229
Identity = 339/445 (76.18%), Postives = 353/445 (79.33%), Query Frame = 1
Query:   10 ALLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 1344
            ALLPA ALAVALVAVDEVQR                         QRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVK KNWF  A  DA GRASHPVEHKVLAWLTILGR NCFASI+Q+SWMS KTVQGMFHKFC+HFAR+MYDEHIHL  EESGKLDHV++       +G V            CPYNQARSYTGKEGFPTIAYQV                      TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKG YLLVDNGYHKWQILIEPS+YPLSENDLLFSK L+SVR+D     GILKGRFRILKLAMAYQSQERID+VFFTCCI+HNMLHTFDGMDQLVENT  +SSA GVGATLATE E DCGSVG +DVNDQPQLEIG TVRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:   54 ALLPARALAVALVAVDEVQRNDLSQQDLLEEDPASDLPFERLARSQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFLAAATDAVGRASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVR-------SGWVYG----------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSA-GVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVWLSR 459          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 600 bits (1547), Expect = 7.530e-212
Identity = 313/444 (70.50%), Postives = 357/444 (80.41%), Query Frame = 1
Query:   13 LLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 1344
            L P  ALA AL A+D++Q+        XXXXXXXXXXXXXXXXX +   D  TCAWAQ+LED+DL+D TSI AK+FR DFRVPY FFLRLV LVK+K+WF+   +DA GR  HPVEHKVLA LTILGRGN F SIY +SWMST TVQ +FH+FC+HFA EMYDEHI LP+EE+G+LD VM QY++LGF GA+GS DVTHI W RCPYNQ RSYTGKEG PT+ YQVTV+HAGR +AVTEGFTGSTNDKTI+C D AV++IRTDKQY EK F V+ +DGTT TLKGCYL+VDNGYHKW++LIEPS+YPLSE DLLFSK LESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM  L E+ NW+ SA        +    D  SVGTKD+ND+PQ+E  H   KR+LTT+F YRKKHKKDIVWLSR
Sbjct:   12 LHPEVALAAALAALDDIQQDDMLSDAEXXXXXXXXXXXXXXXXXXKN--DTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAE---LQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSR 450          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 6.220e-208
Identity = 285/327 (87.16%), Postives = 297/327 (90.83%), Query Frame = 1
Query:  364 KVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 1344
            +VLAWLTILG+GNCFASI+QMSWMS KTVQG+FHKFC+ FAREMYDEHIHLP EESGKL HVMKQYDRLG                 CPYNQARSYTGK+ FPTIAYQVTVDHA RA+AVTEGFTGSTNDKTIVCWDAAV+KIRTDKQYTEKTFD+YNEDGTTTTLKGCY L DNGYHKWQILIEPS+YPLSE+DLLFSK LESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNW+SSA GVG TLATEPE DCGS GTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSA-GVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5JTS2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS2_9PHAE)

HSP 1 Score: 533 bits (1372), Expect = 3.440e-186
Identity = 300/460 (65.22%), Postives = 317/460 (68.91%), Query Frame = 1
Query:    1 GMDALLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNG------------YHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 1344
            GMDALLPATALAVALVA+DE QR                         Q QRKDVETCAWAQLLEDKDLEDSTSITAKQF V+FRV      R      R++  S +G   AG A +             G GNCFASIYQMSWMS KTVQGMFHK C+HFAREMYDEHI                               T +        +A S+T + G PTIAYQVTVDHAGRA+AVTEGFTGSTNDKTI CWDAAVEKIRTDKQYT+KTFDVYNEDGTTTTLKGCYLLVDNG            +  WQILIEPS+ PLSENDLLFSK LES             GR R LKLAM YQSQERIDNVFFTCCILHNMLHTFDG+DQLVENTNW+SSA GVGATLATEPE DCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:    5 GMDALLPATALAVALVAIDEAQRNDLSQQYFLEEDPANDLPRERLTRSQTQRKDVETCAWAQLLEDKDLEDSTSITAKQFLVEFRVLDCCDGR------RRSGKSPSGAQDAGLADYT------------GGGNCFASIYQMSWMSAKTVQGMFHKLCRHFAREMYDEHI-------------------------------TSLR------KRAASWTTQGGVPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIFCWDAAVEKIRTDKQYTDKTFDVYNEDGTTTTLKGCYLLVDNGTEPVFAFHLSVVFFHWQILIEPSKNPLSENDLLFSKRLES-------------GRVRTLKLAMVYQSQERIDNVFFTCCILHNMLHTFDGIDQLVENTNWVSSA-GVGATLATEPESDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 395          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 528 bits (1361), Expect = 3.680e-186
Identity = 253/281 (90.04%), Postives = 265/281 (94.31%), Query Frame = 1
Query:  493 MYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVW 1335
            MYDEHIHLPTEESGKLD V++QYDRLGFTGA+GSMDVTHIAW RCPYNQARSYTGKEGFPTI YQVTVDHAGRA+AVTEGFTGSTNDKT VCWDAAVEKIRTDKQYTEKTFDVYN+DGTTTTLKGCY+LVDNGYHKWQILIEPS+YPLSENDLLFSK LESVRKDVECFFGILKGR RIL LAMA+QSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNW+SSA GVG T  TEPE D GSVGTKDVN +PQ+E GH VRKRQLTTSFAYRKKHKKDIV+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSA-GVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5JBL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL1_9PHAE)

HSP 1 Score: 521 bits (1342), Expect = 2.200e-181
Identity = 281/446 (63.00%), Postives = 310/446 (69.51%), Query Frame = 1
Query:    7 DALLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 1344
            DALLPATALAV LVA+DEVQR                         QR+RKDVE CAWA++LEDKDLEDS SIT+KQFR+DFRVPY+FFLRL ALVK K+WF+ +G DAAGR SH VEHKVLAWLTILGRGNCFASIYQMSWMS KTVQ MFHKF KHFAREMYDEHI+LP+E++G+LDHVM+Q DRLGF GA+ SM VT                             V+HAGRA+ VTEGFTGSTNDKTI+CWDAAVEKIRTDKQY ++TFDVYNEDGTTTTLKGCYLLVDNGYHK     +P                                     +LAMAY  QERIDNVF TCCILHN LHTFD MDQLVENT W SSA G G  +ATE E D  S+G KD ND+ Q+E GH  RKR+LTTSFAYR KHKKDIVWLSR
Sbjct:   40 DALLPATALAVVLVALDEVQRNDLSQEEEEDRAPDLPRPKLSRG--QRKRKDVEKCAWAKMLEDKDLEDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHQVEHKVLAWLTILGRGNCFASIYQMSWMSGKTVQTMFHKFRKHFAREMYDEHIYLPSEQNGELDHVMEQCDRLGFLGAMSSMGVT-----------------------------VNHAGRAIVVTEGFTGSTNDKTIICWDAAVEKIRTDKQYPKQTFDVYNEDGTTTTLKGCYLLVDNGYHK-----DP-------------------------------------ELAMAYHEQERIDNVFLTCCILHNTLHTFDRMDQLVENTLWASSA-GAGTGVATEQEADSSSIGAKDTNDKEQVEKGHGERKRKLTTSFAYRMKHKKDIVWLSR 411          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 490 bits (1262), Expect = 2.570e-169
Identity = 246/325 (75.69%), Postives = 265/325 (81.54%), Query Frame = 1
Query:    1 GMDALLPATALAVALVAVDEVQRXXXXXXXXXXXXXXXXXXXXXXXXXQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLS-ENDLLFSKGLE 972
            G DALLPATALAVALVA+DEVQR                         QRQRK VE CAWA++LEDKDLE+S S T+KQFR+DFRVP  FFLRLVALVK KNWF+ AG DAAGR SHPVEHKVLAWLTILGRGNCFASIYQMSWMS  TVQ MFH FCKHFAREMYDEHI+LP+E++G+LDHVMKQYDRLGF+GA+GSMDVTHI W +CPYN  RSYTGKEG PTI YQVTV+HAGRA AVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQIL+   + P   E   LF +  E
Sbjct:    7 GDDALLPATALAVALVALDEVQRNDLSQEEEDTAPDLTRPRLSRT---QRQRKYVERCAWARMLEDKDLEESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERERSPLFEEAGE 328          
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 471 bits (1213), Expect = 9.540e-161
Identity = 244/405 (60.25%), Postives = 287/405 (70.86%), Query Frame = 1
Query:  154 RKDVETCAWA-QLLEDKDLE-----DSTSITAKQFRVDFRVPYTFFLRLVALVKRKNWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQGMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPEPDCGSVGTKDVN---DQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLS 1341
            RKD     WA QL E KDLE     D TS  A++FR  FR+PY FF+ LVALVK+++WF    +DA+GR   PV+ KVLA L IL RGNCFA IY MS++S +T    FH+F ++FAREMY EHI LPT +  K   VM QYDRLGF+GA GS DVTHI WG CPYNQARSYTGKEG+PT+AYQVTVDH  R +AVT GFTGSTNDK+I+ +D AV KIR D  Y+EK F VY  DGT   LKGCYLLVDNGYHKW  LI PS+YP+ +NDL FSK LESVRKDVECFFGI+KGRFRILKL++ Y  QE IDNVFFTCCILHNMLH++D   ++ E  NW  +A G+       P  D  SVG K  +   +  ++E G   R++QL  SF YRK  K DI WLS
Sbjct:   82 RKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKK--VMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNA-GLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKS-KNDIAWLS 482          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8476.19861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNX4_9PHAE3.870e-26679.83DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE1.300e-22976.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE2.000e-22976.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE7.530e-21270.50Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE6.220e-20887.16DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JTS2_9PHAE3.440e-18665.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI3.680e-18690.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBL1_9PHAE2.200e-18163.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI2.570e-16975.69Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5JAU4_9PHAE9.540e-16160.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8476contigEcto-sp13_S_contig8476:3417..5833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score529.3
Seed ortholog evalue1.8e-147
Seed eggNOG ortholog2880.D7FSK2
Model size1347
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
Cds size1344
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464117.1608703-UTR-Ecto-sp13_S_contig8476:3416..34191681464117.1608703-UTR-Ecto-sp13_S_contig8476:3416..3419Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8476 3417..3419 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464117.1763275-CDS-Ecto-sp13_S_contig8476:3419..37821681464117.1763275-CDS-Ecto-sp13_S_contig8476:3419..3782Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8476 3420..3782 +
1681464117.1877377-CDS-Ecto-sp13_S_contig8476:4551..50851681464117.1877377-CDS-Ecto-sp13_S_contig8476:4551..5085Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8476 4552..5085 +
1681464117.2006419-CDS-Ecto-sp13_S_contig8476:5386..58331681464117.2006419-CDS-Ecto-sp13_S_contig8476:5386..5833Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8476 5387..5833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8476.19861.1prot_Ecto-sp13_S_contig8476.19861.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8476 3420..5833 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8476.19861.1

>prot_Ecto-sp13_S_contig8476.19861.1 ID=prot_Ecto-sp13_S_contig8476.19861.1|Name=mRNA_Ecto-sp13_S_contig8476.19861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=448bp
MDALLPATALAVALVAVDEVQRNDLSQQDLLEEDPANDLPRERLPRSQRQ
RKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKRK
NWFSIAGKDAAGRASHPVEHKVLAWLTILGRGNCFASIYQMSWMSTKTVQ
GMFHKFCKHFAREMYDEHIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDV
THIAWGRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAMAVTEGFTGSTND
KTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKW
QILIEPSRYPLSENDLLFSKGLESVRKDVECFFGILKGRFRILKLAMAYQ
SQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAAGVGATLATEPE
PDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR*
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mRNA from alignment at Ecto-sp13_S_contig8476:3417..5833+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8476.19861.1 ID=mRNA_Ecto-sp13_S_contig8476.19861.1|Name=mRNA_Ecto-sp13_S_contig8476.19861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2417bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8476:3417..5833+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTATGGATGCCCTGCTGCCAGCAACGGCGTTGGCCGTGGCGTTGGTTGC CGTAGATGAGGTCCAACGCAACGACTTGTCGCAGCAGGACCTCCTGGAGG AGGATCCGGCCAACGATCTTCCCCGCGAGAGACTTCCGCGGTCGCAGAGA CAGAGGAAAGACGTGGAGACATGCGCTTGGGCACAGCTGTTGGAGGATAA AGACCTCGAGGACAGCACGAGCATCACCGCAAAGCAGTTTCGAGTGGACT TCCGCGTACCCTACACCTTCTTCCTTCGGCTTGTTGCCTTGGTCAAGAGA AAGAACTGGTTCTCGATTGCTGGGAAGGACGCCGCAGGTCGGGCAAGCCA CCCAGTGGAGCACAAGGTAAGCTGAATAGATGCTAGATTGTTGGAGTGCA GACTCTCTGTTCACAACCAACTAGACTGCTGCAGTAAACAATGTAGAGTT GGTTGGACGAAACCAGCACGGCAGTTCTTTCTTCAACTGAATGCCGTCTC TAGTACATCCATCCCTTGCACACTTGTTCTCGACTGCTGGTCGCGCTCGG CAGTCTTGTGGTGCACCCGGTCGCTCTTCTTTCACGCACAGCACAGCATA ATATTGAGACCGGAAACCTCTGCAGGTGTAGCTACCCTGTACCCTGTACC CATGTACAGCAGTACAGCAGTACGCAAGTAGCGAAAATCGTCACCTCGGT ACTCCTGTACAGCAGTATTAACAGCTGCAGCATTAACAACTGTTGACAGC AGGAAGATACTGTATATCTACGTTGGGTCGAGATGCAGAGATAAGGCAGG AGAGGAGATTCGAGTCACCAATCAAGCGTATGCTGTCGTACGTACAGCGC AACAGTCAGTCCTCCAGCCGGTGAGATGCATGTAAATCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCTTTTGTTGCTTGGCTGC TTTTAGCTGCAAGACACTATGAGCTCGCTAGTAGTCTACCCGCCCGAGAT ATCATCATTCCCGCTGAAAAACAAAGTGCCTCCGCTAGACACTGTTGGAT TTCTGGATTGCTGCACGAGAGTACAATGACCATGTGTACGCTTTGTATCC CCGTGTGTACATGCGTTGGTGACTTGGTGCTGCAGGTGCTGGCCTGGCTG ACTATACTGGGGAGGGGCAACTGCTTTGCAAGCATATACCAGATGTCGTG GATGAGTACGAAGACCGTGCAGGGGATGTTTCACAAGTTCTGCAAGCACT TCGCACGGGAGATGTACGATGAACACATCCACCTCCCTACGGAAGAGAGC GGCAAGTTGGACCACGTCATGAAGCAGTACGATCGGCTTGGGTTTACGGG TGCGGTGGGTTCAATGGACGTCACACATATCGCTTGGGGCAGGTGCCCCT ACAACCAAGCCCGTTCGTACACAGGCAAGGAGGGGTTTCCCACGATCGCG TACCAGGTCACGGTTGATCATGCTGGCCGGGCAATGGCCGTAACGGAGGG TTTCACAGGCTCGACGAACGACAAGACCATCGTCTGCTGGGATGCCGCGG TGGAGAAGATTCGGACGGACAAGCAGTACACGGAGAAGACGTTCGACGTG TACAATGAGGACGGCACGACGACGACGCTCAAGGGGTGCTACTTGCTCGT CGACAACGGTTACCACAAGGTGCATGTAAATTAGTACCGTGTGCTTGAGT GGTAAAAACATTTGTTTGGACGAGACATGTGTCCGGCCTGAGACAGAGAG TGTAGACAGACAGAGACAGAGAAAGAGAGAGCGCTGGCCAGCAAAGTCTT TGTTGTCGGGGAAAATGACGCAGCAGCTAGTTTCGGACCGTTTCAACGCA AACCGTTCATGGTATTGAGATGTCAGATACGGCAATCGAAACCTCGACTG CCCTCACAGCTTCTAACAACGTAGCACCGAACCCGTCTTCGCCTTCCCTC TCTCTGTCGCGTATTTCCAGTGGCAAATCCTGATCGAGCCCTCCAGGTAC CCGCTGAGCGAGAACGACCTGCTCTTTTCGAAGGGGCTGGAGAGCGTACG CAAGGACGTGGAGTGCTTCTTCGGCATCCTGAAGGGTCGCTTTAGGATCC TCAAGCTCGCCATGGCGTACCAGAGCCAGGAGCGCATCGACAACGTGTTT TTCACGTGCTGCATCTTGCACAACATGCTGCACACCTTCGACGGCATGGA CCAGCTGGTGGAGAACACGAACTGGATTAGCAGTGCTGCTGGGGTGGGGG CCACGTTGGCGACGGAGCCGGAGCCGGACTGTGGATCTGTCGGGACGAAG GACGTCAACGACCAGCCTCAATTGGAGATCGGGCACACGGTGCGCAAGCG ACAGCTCACCACGAGCTTTGCGTACCGCAAGAAGCACAAGAAGGACATTG TCTGGCTTTCTAGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8476:3417..5833+

>mRNA_Ecto-sp13_S_contig8476.19861.1 ID=mRNA_Ecto-sp13_S_contig8476.19861.1|Name=mRNA_Ecto-sp13_S_contig8476.19861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1344bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8476:3417..5833+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGCCCTGCTGCCAGCAACGGCGTTGGCCGTGGCGTTGGTTGCCGT
AGATGAGGTCCAACGCAACGACTTGTCGCAGCAGGACCTCCTGGAGGAGG
ATCCGGCCAACGATCTTCCCCGCGAGAGACTTCCGCGGTCGCAGAGACAG
AGGAAAGACGTGGAGACATGCGCTTGGGCACAGCTGTTGGAGGATAAAGA
CCTCGAGGACAGCACGAGCATCACCGCAAAGCAGTTTCGAGTGGACTTCC
GCGTACCCTACACCTTCTTCCTTCGGCTTGTTGCCTTGGTCAAGAGAAAG
AACTGGTTCTCGATTGCTGGGAAGGACGCCGCAGGTCGGGCAAGCCACCC
AGTGGAGCACAAGGTGCTGGCCTGGCTGACTATACTGGGGAGGGGCAACT
GCTTTGCAAGCATATACCAGATGTCGTGGATGAGTACGAAGACCGTGCAG
GGGATGTTTCACAAGTTCTGCAAGCACTTCGCACGGGAGATGTACGATGA
ACACATCCACCTCCCTACGGAAGAGAGCGGCAAGTTGGACCACGTCATGA
AGCAGTACGATCGGCTTGGGTTTACGGGTGCGGTGGGTTCAATGGACGTC
ACACATATCGCTTGGGGCAGGTGCCCCTACAACCAAGCCCGTTCGTACAC
AGGCAAGGAGGGGTTTCCCACGATCGCGTACCAGGTCACGGTTGATCATG
CTGGCCGGGCAATGGCCGTAACGGAGGGTTTCACAGGCTCGACGAACGAC
AAGACCATCGTCTGCTGGGATGCCGCGGTGGAGAAGATTCGGACGGACAA
GCAGTACACGGAGAAGACGTTCGACGTGTACAATGAGGACGGCACGACGA
CGACGCTCAAGGGGTGCTACTTGCTCGTCGACAACGGTTACCACAAGTGG
CAAATCCTGATCGAGCCCTCCAGGTACCCGCTGAGCGAGAACGACCTGCT
CTTTTCGAAGGGGCTGGAGAGCGTACGCAAGGACGTGGAGTGCTTCTTCG
GCATCCTGAAGGGTCGCTTTAGGATCCTCAAGCTCGCCATGGCGTACCAG
AGCCAGGAGCGCATCGACAACGTGTTTTTCACGTGCTGCATCTTGCACAA
CATGCTGCACACCTTCGACGGCATGGACCAGCTGGTGGAGAACACGAACT
GGATTAGCAGTGCTGCTGGGGTGGGGGCCACGTTGGCGACGGAGCCGGAG
CCGGACTGTGGATCTGTCGGGACGAAGGACGTCAACGACCAGCCTCAATT
GGAGATCGGGCACACGGTGCGCAAGCGACAGCTCACCACGAGCTTTGCGT
ACCGCAAGAAGCACAAGAAGGACATTGTCTGGCTTTCTAGGTAG
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