prot_Ecto-sp13_S_contig8451.19832.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8451.19832.1
Unique Nameprot_Ecto-sp13_S_contig8451.19832.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length455
Homology
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: D7G0F0_ECTSI (Tau95 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F0_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 7.270e-131
Identity = 254/401 (63.34%), Postives = 269/401 (67.08%), Query Frame = 0
Query:   55 FLFRILRRERKHHDTVKLQRGSLLVYHRFGEPVKQVTKSGAILVRDAKGMYTQVEHLRVELDKKWGSGRQRGRKNRPSRYRKGISGHNEVREQRLLLVQKIVKLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSSTPKVFAPGVATASPAAKTAPTAAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAPAAATASSXPKKGSEGHSXXXXXXXXXXXXXXXXXXXXXXXXXSKVDDEETEADPPFGDAATTGPAATEHASKKSKTGPSGDSATTATADNEGDQVAEAEMEEXXXXXXXXXXXXRQEDPGLTLASQRFPVGGIVPEVGLTSRPKGRFASQV 455
            F+F+ILRRERKHHDTVKLQRGSLLVYHRFGE VK VTKSGAIL+RDAK    +VEHLRVELD+KWGSGRQRGRKNRPSRYRKGISGHNEVREQRLLLVQKIVKLFEKQPMYFMRELEE+MQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSSTPKV AP VAT+SPAAKTA                               XXXX           X ++G  G                                           A+ T P A                           +V EAEMEEXXXXXXXXXXXX ++D GLTL SQR  VGG+VPEVGLTSRPKGRFASQ+
Sbjct:  170 FIFKILRRERKHHDTVKLQRGSLLVYHRFGEAVKHVTKSGAILIRDAK----EVEHLRVELDRKWGSGRQRGRKNRPSRYRKGISGHNEVREQRLLLVQKIVKLFEKQPMYFMRELEEHMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSSTPKVLAPVVATSSPAAKTA------------------------------AXXXXXXXXXXXXXXXXVREGGRG-------------------------------------------ASVTAPVA---------------------------KVVEAEMEEXXXXXXXXXXXXXKKDAGLTLTSQRLSVGGVVPEVGLTSRPKGRFASQL 466          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: A0A6H5KH63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH63_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.610e-43
Identity = 191/304 (62.83%), Postives = 194/304 (63.82%), Query Frame = 0
Query:  216 RFEQILEFRLFPAQLRVWAAALEQAGVKKSSTPKVFAPGVATASPAAKTAPTAAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------VTAPAAATASSXPKKGSEGHSXXXXXXXXXXXXXXXXXXXXXXXXXSKVDDE-ETEADPPFGDAATTGPAATEHASKKSKTGPSGDSATTATADNEGDQVAEAEMEEXXXXXXXXXXXXRQEDPGLTLASQRFPVGGIVPEVGLTSRPKGRFASQV 455
            RFEQILEFRLFPAQLRVWAAALEQAGVKKSS PKVFAP VATASPAAKTA       XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                               VTAPA      X         XXXXXXXXXXXXXXXXXXXXXXXXX       ETE DPPFGDAA TGPAATEHASKKSKTGPSGDSATTATADNEGDQVAEAEMEEXXX         RQ++ GLTL SQR  VGGIVPEVGL SRPKGRFASQ+
Sbjct:   20 RFEQILEFRLFPAQLRVWAAALEQAGVKKSSPPKVFAPVVATASPAAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVREGGRGASVTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETETDPPFGDAANTGPAATEHASKKSKTGPSGDSATTATADNEGDQVAEAEMEEXXXGAVAGGGSGRQKNTGLTLTSQRLSVGGIVPEVGLASRPKGRFASQL 323          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: A0A8K0KPC3_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KPC3_LADFU)

HSP 1 Score: 70.5 bits (171), Expect = 2.480e-9
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0
Query:  166 FMRELEEYMQDQPTWP--------------IRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRL 225
            F+R +++Y++++P W               ++ L+PAV+YY+ NGPWR  W RFGY P  HPS R  Q L+FRL
Sbjct:  314 FLR-IQKYLEERPVWSKNALLALTKLTADQLKYLLPAVSYYFLNGPWRGTWARFGYDPTKHPSARLYQTLDFRL 386          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: E0VNE6_PEDHC (Uncharacterized protein n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VNE6_PEDHC)

HSP 1 Score: 68.2 bits (165), Expect = 1.130e-8
Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  152 VQKIVKLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRL 225
            +Q + +LF+++P+Y    +   +   P   ++ L+P VAYY+ NGPWRS WVRFGY P   P  R  Q L++R+
Sbjct:  215 LQLLKQLFQERPIYSKSAIRS-ISKVPLIQLKCLLPCVAYYFINGPWRSLWVRFGYDPRKDPKSRIYQTLDYRV 287          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: UPI001D065B6C (general transcription factor 3C polypeptide 5 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D065B6C)

HSP 1 Score: 67.8 bits (164), Expect = 1.670e-8
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0
Query:  170 LEEYMQDQPTWP--------------IRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRL 225
            L++  +++P WP               + ++PAVAYY+ NGPWR+ WVR+GY P   PS R  Q L+FR+
Sbjct:  266 LKKLFEERPIWPRNGILARTGFTNDHCKHILPAVAYYFVNGPWRTMWVRYGYNPRKEPSSRIYQTLDFRV 335          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: UPI001EB04768 (general transcription factor 3C polypeptide 5-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB04768)

HSP 1 Score: 67.0 bits (162), Expect = 1.690e-8
Identity = 46/158 (29.11%), Postives = 82/158 (51.90%), Query Frame = 0
Query:   78 LVYHRFGEPVKQVTKSGAILVRDA-KGMYTQVEHLRVELDKKWGSGRQRGR---------KNRPSRYRKGISGHNEVREQRLLLVQKIVKLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRL 225
            +++ R   PV+ + +   ++ R A KG+    EHL   L    G+GRQ+           ++ P    +G     + + +   L+Q + +LFE++ ++    +   M  +    ++ ++P VAYY+CNGPWR+ WV+FGY P    + +  QIL+FRL
Sbjct:  175 MIFSRIDTPVEYLYRPDKVMNRSAQKGL----EHLPPHLI---GTGRQKRTIYTIFKTFDEDTPIGPPEGAESFLQAKLKNTNLLQLVQRLFEERLIWSKNGIRCNMPAKYHPRLKYVLPLVAYYFCNGPWRTLWVKFGYDPRKDKNAKMYQILDFRL 325          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: UPI001EE57BC9 (general transcription factor 3C polypeptide 5-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE57BC9)

HSP 1 Score: 66.2 bits (160), Expect = 5.240e-8
Identity = 45/158 (28.48%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   78 LVYHRFGEPVKQVTKSGAILVRDA-KGMYTQVEHLRVELDKKWGSGRQRGR---------KNRPSRYRKGISGHNEVREQRLLLVQKIVKLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRL 225
            +++ R   PV+ + +   ++ R+A KG+    +HL   L    G+GRQ+           ++ P    +G     + + +   L+Q +  LFE++P++    +   +  +    ++ ++P VAYY+CNGPWR+ WV+FGY P    + +  QIL+FRL
Sbjct:  150 MIFSRIDTPVEYLYRPDKVMNRNAQKGL----DHLPPHLI---GTGRQKRTIYTIFKTFDEDTPIGPPEGAEAFLKAKLKNTNLLQLVQTLFEERPIWSKNGIRCNLPLKYHPRLKYVLPLVAYYFCNGPWRTLWVKFGYDPRKDRNAKMYQILDFRL 300          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: A0A369S926_9METZ (General transcription factor 3C polypeptide 5 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369S926_9METZ)

HSP 1 Score: 65.9 bits (159), Expect = 6.650e-8
Identity = 26/69 (37.68%), Postives = 48/69 (69.57%), Query Frame = 0
Query:  157 KLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRL 225
            +LF+ +P++    L  +++++  W ++ ++PAVAY++ +GPWRS WV+FGY P   PS +  Q+ +FR+
Sbjct:  251 ELFKDRPIWSKNALRVHIKNE--WKLKIVLPAVAYHFKSGPWRSLWVKFGYDPRRDPSSKVYQVFDFRM 317          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: A0A182G5N9_AEDAL (Uncharacterized protein n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G5N9_AEDAL)

HSP 1 Score: 65.9 bits (159), Expect = 6.750e-8
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 0
Query:  151 LVQKIVKLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSSTP 248
            +++ + K FE++P++    L+  +Q      IR L+P++A+Y+ NGPWR  WVRFGY P      R+ Q+L+FR+     R   A  ++  VK++  P
Sbjct:  231 VIEMVTKKFEERPIWTKTALKGSLQLSEE-DIRYLLPSMAFYFVNGPWRGTWVRFGYDPRKLFESRYYQLLDFRI-----RAIGAMHDKVKVKRTQKP 322          
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Match: A0A240PMP5_9DIPT (General transcription factor 3C polypeptide 5 (transcription factor C subunit n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A240PMP5_9DIPT)

HSP 1 Score: 64.7 bits (156), Expect = 1.540e-7
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0
Query:  159 FEKQPMYFMRELEEYMQDQPTWPIRD-LVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSS 246
            FE +P++    L    Q   +  +   L+PAVAY+Y NGPWRS WVRFGY P  H   R  Q+L+FR+  +        +++  + KS+
Sbjct:  237 FEARPIWTKHALRNMKQFNVSNDMMGTLLPAVAYFYVNGPWRSTWVRFGYDPRKHFEARMYQMLDFRVRSSDAHHDTIKIKRLAISKSN 325          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8451.19832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0F0_ECTSI7.270e-13163.34Tau95 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KH63_9PHAE1.610e-4362.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K0KPC3_LADFU2.480e-941.89Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
E0VNE6_PEDHC1.130e-840.54Uncharacterized protein n=1 Tax=Pediculus humanus ... [more]
UPI001D065B6C1.670e-840.00general transcription factor 3C polypeptide 5 n=1 ... [more]
UPI001EB047681.690e-829.11general transcription factor 3C polypeptide 5-like... [more]
UPI001EE57BC95.240e-828.48general transcription factor 3C polypeptide 5-like... [more]
A0A369S926_9METZ6.650e-837.68General transcription factor 3C polypeptide 5 n=1 ... [more]
A0A182G5N9_AEDAL6.750e-834.69Uncharacterized protein n=3 Tax=Aedes albopictus T... [more]
A0A240PMP5_9DIPT1.540e-737.08General transcription factor 3C polypeptide 5 (tra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 143..204
e-value: 5.0E-5
score: 25.2
IPR019136Transcription factor IIIC subunit 5, HTH domainPFAMPF09734Tau95coord: 116..224
e-value: 1.2E-18
score: 68.2
IPR040454Transcription factor IIIC subunit Tfc1/Sfc1PANTHERPTHR13230GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5coord: 151..229
NoneNo IPR availablePANTHERPTHR13230:SF5GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 5coord: 151..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8451contigEcto-sp13_S_contig8451:459..5565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8451.19832.1mRNA_Ecto-sp13_S_contig8451.19832.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8451 459..5720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8451.19832.1 ID=prot_Ecto-sp13_S_contig8451.19832.1|Name=mRNA_Ecto-sp13_S_contig8451.19832.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=455bp
MCYDAVEGEGRGGGWHMAFAFDALANEQVCIWATSRDYIPTSVSWRRSIV
TPVYFLFRILRRERKHHDTVKLQRGSLLVYHRFGEPVKQVTKSGAILVRD
AKGMYTQVEHLRVELDKKWGSGRQRGRKNRPSRYRKGISGHNEVREQRLL
LVQKIVKLFEKQPMYFMRELEEYMQDQPTWPIRDLVPAVAYYYCNGPWRS
RWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSSTPKV
FAPGVATASPAAKTAPTAAAKASAATGSAEAAAAAGSAGAAVRGGGRGAS
VTAPAAATASSAPKKGSEGHSSSSSKSGEAGGAAAGDAKDSNNTENSKVD
DEETEADPPFGDAATTGPAATEHASKKSKTGPSGDSATTATADNEGDQVA
EAEMEEEEDGAVVGGGGGRQEDPGLTLASQRFPVGGIVPEVGLTSRPKGR
FASQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR019136TF_IIIC_su-5_HTH
IPR040454TF_IIIC_Tfc1/Sfc1