mRNA_Ecto-sp13_S_contig84489.19828.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: D1J7B0_ECTSI (Uncharacterized protein Escp152 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7B0_ECTSI) HSP 1 Score: 323 bits (829), Expect = 2.410e-106 Identity = 161/179 (89.94%), Postives = 173/179 (96.65%), Query Frame = 1
Query: 1 MNLYFPLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEIENIEDLEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEKFHNRIHTLFHIDIFRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
MNLYFPLTEHNELHIPVNQLSSNIFE K+KIDE+SE+NT+SL DHDE IN+NLE+ENIEDLEMMNFHEKYTSKL+TLKKTE HKKINKIKIYFIVKSKIV+G+E+TVAIPIRCFDDLGNAKPEKFHNRI+TLFHID+FRGRP TQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL
Sbjct: 1 MNLYFPLTEHNELHIPVNQLSSNIFEAVKDKIDEKSELNTDSLGDHDENINNNLEVENIEDLEMMNFHEKYTSKLDTLKKTEAHKKINKIKIYFIVKSKIVKGEEITVAIPIRCFDDLGNAKPEKFHNRINTLFHIDVFRGRPNTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 179
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A1I9LVA6_9PHAE (Uncharacterized protein n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVA6_9PHAE) HSP 1 Score: 130 bits (326), Expect = 3.960e-32 Identity = 82/181 (45.30%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 1 MNLYFPLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEIENIEDLEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEKFHNRIHTLFHI--DIFRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
MNLYF TE NEL+ P + LS NI +T N D + EIN +H + NDN++ E IE + +F+EKY S LN T T KK+NK K+YFIVKSKI++GKE+ A+PIRC +DL + E + I F + D G+ Y +G P +P+ L+ +V PF ++ EFSLEDLIL
Sbjct: 1 MNLYFSPTERNELNFPTSNLSINITDTVINSND-KVEINAEHSFNHIDS-NDNIDREEIE---INDFYEKYRSTLNKFNNTLTQKKLNKTKVYFIVKSKILQGKEINFAVPIRCSEDLDLSFLELSKSLISMFFFVKVDPKEGQRYIEGRPGNRPYNLKHLVDPEPPFDVEHEFSLEDLIL 176
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A344PFC3_9PHAE (Uncharacterized protein n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A344PFC3_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.070e-31 Identity = 75/181 (41.44%), Postives = 105/181 (58.01%), Query Frame = 1
Query: 1 MNLYFPLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEIENIEDLEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEKFHNRIHTLFHIDIFRGRP--YTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
MN+YFP T++ EL P N LS NI E ++ EI TN+ +D ED+E+ F++KYT+K + KK+NKIK+YFIVKSK+V+GKE+ A+PIR FDDLGN+ EK + I FH+ + P Y +G P +PF L+ ++ PF +EE LE+ IL
Sbjct: 1 MNIYFPSTDYTELTFPTNNLSLNITEPISSQ-----EIETNTNMDQ-------------EDIEIGEFYKKYTTKREKFHIAASKKKLNKIKVYFIVKSKLVKGKEVNFAVPIRAFDDLGNSIIEKSNTLIAGFFHVKVDHNLPGKYVEGRPGTRPFRLDHLIDTEPPFETEEEVPLENFIL 163
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A5A4MIP9_9PHAE (Uncharacterized protein n=1 Tax=Hapterophycus canaliculatus TaxID=2567908 RepID=A0A5A4MIP9_9PHAE) HSP 1 Score: 127 bits (318), Expect = 5.220e-31 Identity = 73/181 (40.33%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 1 MNLYFPLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEIENIEDLEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEKFHNRIHTLFHIDIFRGRP--YTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
M++YFP+ +++EL+ P N LS NI E + ER V+ D+ ED+E+ F++KY+++ N T + KK+NKIK+YFIVK K+V+GKE+ VA+PIR FDDLGN+ EK + I + FH+ + P Y +G P +PF LE ++ PF +EE LE+ IL
Sbjct: 1 MSIYFPVNDYSELNFPANNLSINITEPISKQDSERH-------VNIDQ-----------EDIEIGEFYKKYSTERNRFATTTSTKKLNKIKVYFIVKPKLVKGKEVNVAVPIRAFDDLGNSIIEKSNTLIASFFHVRVDHNLPGKYIEGRPGTRPFRLEHLIDTEPPFSTEEEVPLENFIL 163
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A7T8G5F4_SCYLO (Uncharacterized protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A7T8G5F4_SCYLO) HSP 1 Score: 122 bits (305), Expect = 3.580e-29 Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 1 MNLYFPLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEIENIEDLEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEKFHNRIHTLFHIDIFRGRP--YTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
MN+YFP T++ +L+ P L N E+ N +E S IN + ED+E+ F++KY K + T + KK+NKIK+YF+VKSK+V+GKE+ A+PIR FDDLGN+ EK + + + FH+ + P Y +G P +PF L+ ++ PFG +EE LE+ IL
Sbjct: 1 MNIYFPATDYTDLNFPTKNLPLNTTESISNNENE-SHINIDQ-----------------EDIEISEFYKKYGIKKDRFDTTASRKKLNKIKVYFLVKSKLVKGKEVQYAVPIRTFDDLGNSIIEKSNALVASFFHVKADQNLPGKYIEGRPGTRPFRLDHLIDTEPPFGTEEEVPLENFIL 163
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A6B7EYX5_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYX5_9PHAE) HSP 1 Score: 107 bits (268), Expect = 5.980e-24 Identity = 58/126 (46.03%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 172 NIEDLEMMNFHEKYTSKLNT-LKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEKFHNRIHTLFHIDI---FRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
N ED+E+ F++KY SK ++T++HKK+N+IK++FIVKSK+V+GKE+ AIPIR FDDLGN+ EK ++ I ++F++ G Y +G+P +PF L+ I+ PF + EF LE+LIL
Sbjct: 118 NTEDIEISKFYKKYQSKKKKKFEETKSHKKLNQIKVFFIVKSKVVKGKEVRYAIPIRNFDDLGNSILEKSNSFIASVFYLKADHHLNGLEYIEGNPGARPFRLDGIIDPESPFYEEAEFPLENLIL 243
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A0R6M0B1_UNDPI (Uncharacterized protein n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A0R6M0B1_UNDPI) HSP 1 Score: 66.2 bits (160), Expect = 1.700e-9 Identity = 58/167 (34.73%), Postives = 83/167 (49.70%), Query Frame = 1
Query: 49 VNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEI-ENIEDLEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEK-FHNRIHT-LFHIDI-FRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
+N+ + N+F+ N D SE N D IND E+ E EDL K T K + +K+NK+++YFIVKS V G+++ +A+PI FDDL N+ K R T L D + + +G P +PFILE + P+G E LE L+L
Sbjct: 25 INESNKNLFDRNVNVKDLWSE--ENEKFDR-WGINDGSEVPEKPEDLTESIKEIKITGKKGANQSLSAKEKLNKVQVYFIVKSIKVEGEDVLIAVPINNFDDLSNSSYGKAISARAGTFLMRTDADLNKKGFIEGRPGNRPFILEQALEVEAPYGSLPELPLEVLVL 188
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A8F0FBH1_ALAMR (Uncharacterized protein n=7 Tax=Alaria TaxID=2888 RepID=A0A8F0FBH1_ALAMR) HSP 1 Score: 63.9 bits (154), Expect = 1.060e-8 Identity = 62/192 (32.29%), Postives = 94/192 (48.96%), Query Frame = 1
Query: 4 NLYF-PLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPINDNLEIENIED----------LEMMNFHEKYTSKLNTLKKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEK-FHNRIHT-LFHIDI-FRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
NL F P N+L++ +++S+ I ++ KN D + +N N+L + N+N + I D L N K T + + + +K+NK+++YFIVKS GKE VA+PI FDDL N+ K R T L D + + +G P +PFILE + P+G E LE L+L
Sbjct: 3 NLNFVPKNVPNDLNVS-SRVSNEINDSDKNLFD--NNVNVNNLWSEE---NENFDRWGINDGSEKTDKPGNLNESNKKIKLTGEKDVNQNLAAKEKLNKVQVYFIVKSIKGEGKEALVAVPINNFDDLSNSSYGKAISARAGTFLMRTDADLNKKGFIEGKPGNRPFILEHALEVEAPYGSLPELPLEALVL 188
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A5B9RGG1_9PHAE (Uncharacterized protein n=22 Tax=Laminariales TaxID=2886 RepID=A0A5B9RGG1_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 6.650e-8 Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 235 KKTETHKKINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEK-FHNRIHT-LFHIDI-FRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
K +K+NKI++YFIVKS V KE VA+P+ FDDL N+ K R T L D + + +G P +PFILE + P+G E LE L+L
Sbjct: 85 KNINAKEKLNKIQVYFIVKSIKVEEKEFLVAVPVNNFDDLSNSSYGKAISARAGTFLMRTDADLNKKGFIEGRPGNRPFILEHALEVEAPYGSLPELPLEALLL 188
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Match: A0A8F0JZY5_9PHAE (Uncharacterized protein n=1 Tax=Egregia menziesii TaxID=105409 RepID=A0A8F0JZY5_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 6.650e-8 Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 256 KINKIKIYFIVKSKIVRGKEMTVAIPIRCFDDLGNAKPEK-FHNRIHT-LFHIDI-FRGRPYTQGSPALKPFILEDIVFAAHPFGLDEEFSLEDLIL 537
K+NKI++YFIVKS V KE VA+PI FDDL N+ K R T L D + + +G P +PFILE + P+G + LE L+L
Sbjct: 92 KLNKIEVYFIVKSLKVEKKEFLVAVPINNFDDLSNSSYGKAISARAGTFLMRTDADLNKKGFIEGRPGNRPFILEHALEVEAPYGSLADLPLESLLL 188 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84489.19828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig84489.19828.1 >prot_Ecto-sp13_S_contig84489.19828.1 ID=prot_Ecto-sp13_S_contig84489.19828.1|Name=mRNA_Ecto-sp13_S_contig84489.19828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp MNLYFPLTEHNELHIPVNQLSSNIFETTKNKIDERSEINTNSLVDHDEPIback to top mRNA from alignment at Ecto-sp13_S_contig84489:3..539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig84489.19828.1 ID=mRNA_Ecto-sp13_S_contig84489.19828.1|Name=mRNA_Ecto-sp13_S_contig84489.19828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig84489:3..539- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig84489:3..539- >mRNA_Ecto-sp13_S_contig84489.19828.1 ID=mRNA_Ecto-sp13_S_contig84489.19828.1|Name=mRNA_Ecto-sp13_S_contig84489.19828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig84489:3..539- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |