prot_Ecto-sp13_S_contig8445.19826.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8445.19826.1
Unique Nameprot_Ecto-sp13_S_contig8445.19826.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length676
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8445.19826.1 vs. uniprot
Match: A0A6H5JWD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD0_9PHAE)

HSP 1 Score: 799 bits (2063), Expect = 1.790e-283
Identity = 439/494 (88.87%), Postives = 453/494 (91.70%), Query Frame = 0 
Query:    1 MSLHFSQDTLTKWEEQEMFKGSLDDQRRMKQETSHQQHNNLPSNTGNHVPGLASSSVAQDDLSIPGLNQVVPGLNQRPGHAPRYEGSSSPQQDKKPYMSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKQAEKAKLDEEKRLELEEVRRLPGMSGPRRQQHAQFQESPDHPLPSPGRLPPARHTHATVDRHQHQHRGGNVSDRAGAIAPVNGSAMNGEYASMNPPGINDRGCDGGGQGHPGGPVYRRDQVSGDYRRPYAHPQQTQTAVYAGDYAPDGRQDLALDVQARTRTSSRRFDEYRQGFGDAGRPQGWLDTTGQAQGAESAARKPAFEAEGVRSAAQSSDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLATERPREEMTRRPKKHQDREHQHQRGVSRSGGAAGRPSGGTTSRSGDRIRRTQSLSGSGASRMLGSSNPSTLRRERKPVPKSGVAFGSTRSRMPSPTVVKPRVLP 494
            MSLHFSQDTL+K E+QEMFK SLDDQRR+KQETSHQQ NNLPSNTGNHVPGLASSSV  DDLSIPGLNQVVPGLNQRPG+APR+EGS SPQQDK+PYMSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRK+AEKAKLDEEKRLELEEVRRL GM GPRRQQHAQFQESPDHPLPSPGRLPPAR THATVDRHQHQHRGGNVSDRAGAIAPVNGSAM G YASMNP GINDRG +GGGQ HPG P YRRDQVS DYRRPYAHPQQT TAV AGD+ P GRQDLA DVQART+TSSRRFDEYRQGFGDAGR QG  DTTGQA+GAESA  K AFE EG  SAAQS DSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLA ERPREEMTRRPKKHQDREHQHQRGV+RSGGA  +PSGGTTSR GDRIRRTQ+LSGSGASRM G SNPSTL RERKPVPKSGVAFGSTRSRMPSPTV KPRV P
Sbjct:    1 MSLHFSQDTLSKREKQEMFKKSLDDQRRLKQETSHQQDNNLPSNTGNHVPGLASSSVPPDDLSIPGLNQVVPGLNQRPGYAPRFEGSPSPQQDKQPYMSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKEAEKAKLDEEKRLELEEVRRLQGMLGPRRQQHAQFQESPDHPLPSPGRLPPARPTHATVDRHQHQHRGGNVSDRAGAIAPVNGSAMYGGYASMNPHGINDRGYEGGGQRHPGAPAYRRDQVSLDYRRPYAHPQQTDTAVCAGDHDPGGRQDLASDVQARTQTSSRRFDEYRQGFGDAGRAQGQFDTTGQARGAESATGKLAFEEEGGSSAAQSCDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLAAERPREEMTRRPKKHQDREHQHQRGVARSGGAGRQPSGGTTSRRGDRIRRTQTLSGSGASRMQGGSNPSTLSRERKPVPKSGVAFGSTRSRMPSPTVEKPRVPP 494
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BLAST of mRNA_Ecto-sp13_S_contig8445.19826.1 vs. uniprot
Match: D7FQR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR3_ECTSI)

HSP 1 Score: 666 bits (1719), Expect = 8.470e-233
Identity = 363/397 (91.44%), Postives = 370/397 (93.20%), Query Frame = 0 
Query:   98 MSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKQAEKAKLDEEKRLELEEVRRLPGMSGPRRQQHAQFQESPDHPLPSPGRLPPARHTHATVDRHQHQHRGGNVSDRAGAIAPVNGSAMNGEYASMNPPGINDRGCDGGGQGHPGGPVYRRDQVSGDYRRPYAHPQQTQTAVYAGDYAPDGRQDLALDVQARTRTSSRRFDEYRQGFGDAGRPQGWLDTTGQAQGAESAARKPAFEAEGVRSAAQSSDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLATERPREEMTRRPKKHQDREHQHQRGVSRSGGAAGRPSGGTTSRSGDRIRRTQSLSGSGASRMLGSSNPSTLRRERKPVPKSGVAFGSTRSRMPSPTVVKPRVLP 494
            MSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRK+AEKAKLDE   LELEEVRRL GMSGPRRQQHAQFQESPDHPLPSPGRLPPA+H+HATV RHQHQHRGGNVSDRAGAIAP NGSAMNG YASMNPPGINDRG +GGGQGHPG P YRRDQVSGDY RPYAHP QT TAVYAGDYAPDGRQDLA DVQART TSSRRFDEYRQGFGDAGRPQG LDTTGQA+GAESA RKPAFEAEGV SA QSSDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLA ERPREEMTRR KKHQDREHQHQRGV+RSGGA GRPSGGTTSRSGD IRRTQSLSGSGASRM G SNPSTLRRERKPVPKSGVAFGSTRSRMPSPT+ KPRV P
Sbjct:    1 MSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKEAEKAKLDEXXXLELEEVRRLQGMSGPRRQQHAQFQESPDHPLPSPGRLPPAKHSHATVGRHQHQHRGGNVSDRAGAIAPANGSAMNGGYASMNPPGINDRGYEGGGQGHPGAPAYRRDQVSGDYMRPYAHPHQTDTAVYAGDYAPDGRQDLASDVQARTHTSSRRFDEYRQGFGDAGRPQGRLDTTGQARGAESATRKPAFEAEGVSSAPQSSDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLAAERPREEMTRRLKKHQDREHQHQRGVARSGGAGGRPSGGTTSRSGDIIRRTQSLSGSGASRMQGGSNPSTLRRERKPVPKSGVAFGSTRSRMPSPTLEKPRVPP 397
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8445.19826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWD0_9PHAE1.790e-28388.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQR3_ECTSI8.470e-23391.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 359..386
NoneNo IPR availableCOILSCoilCoilcoord: 123..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8445contigEcto-sp13_S_contig8445:1923..6509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8445.19826.1mRNA_Ecto-sp13_S_contig8445.19826.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8445 1301..6575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8445.19826.1 ID=prot_Ecto-sp13_S_contig8445.19826.1|Name=mRNA_Ecto-sp13_S_contig8445.19826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=676bp
MSLHFSQDTLTKWEEQEMFKGSLDDQRRMKQETSHQQHNNLPSNTGNHVP
GLASSSVAQDDLSIPGLNQVVPGLNQRPGHAPRYEGSSSPQQDKKPYMSA
LSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKQAEKAKLDEEKRL
ELEEVRRLPGMSGPRRQQHAQFQESPDHPLPSPGRLPPARHTHATVDRHQ
HQHRGGNVSDRAGAIAPVNGSAMNGEYASMNPPGINDRGCDGGGQGHPGG
PVYRRDQVSGDYRRPYAHPQQTQTAVYAGDYAPDGRQDLALDVQARTRTS
SRRFDEYRQGFGDAGRPQGWLDTTGQAQGAESAARKPAFEAEGVRSAAQS
SDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLATERPREEMTR
RPKKHQDREHQHQRGVSRSGGAAGRPSGGTTSRSGDRIRRTQSLSGSGAS
RMLGSSNPSTLRRERKPVPKSGVAFGSTRSRMPSPTVVKPRVLPRGTRGN
RDSRVTKSEPIPRTDHLSDLRPTRNVVSTNGDAGGSSGKLFVNREAFDSG
RPSIASKDTRDTGSERFAELDRVARGSDLAPPEENGGNARGARASEAGGG
ASSTVYGLLSSGKGLGREDFGREEAESTRRLRADSRGRIGGGELGGESTF
LAAHPTDSGFTGLEGGAWALRRGAY*
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