prot_Ecto-sp13_S_contig12396.1981.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12396.1981.1
Unique Nameprot_Ecto-sp13_S_contig12396.1981.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: D7FVV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV7_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 5.430e-70
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0
Query:   36 ALERSMPEYVLPYAIHLLAYHPDFPVHKDDKQRIKNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR 158
            ALERSMPEYVLPYAIHLLAYHPDFP HKDDKQRIKN+EKYLNFLIEPLI  GRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR
Sbjct: 1184 ALERSMPEYVLPYAIHLLAYHPDFPAHKDDKQRIKNLEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR 1306          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: A0A6H5KWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWB1_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 8.780e-69
Identity = 121/128 (94.53%), Postives = 121/128 (94.53%), Query Frame = 0
Query:   36 ALERSMPEYVLPYAIHLLAYHPDFPVHK-----DDKQRIKNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR 158
            ALERSMPEYVLPYAIHLLAYHPDFPVHK     DDKQRIKNMEKYLNFLIEPLI  GRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR
Sbjct: 1048 ALERSMPEYVLPYAIHLLAYHPDFPVHKARGNFDDKQRIKNMEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR 1175          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: W7TFJ9_9STRA (Sister chromatid cohesion protein pds5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFJ9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.680e-24
Identity = 59/133 (44.36%), Postives = 78/133 (58.65%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRIKNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDAL-----------------DPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLF 156
            MPEY+LPY +HLLA+ PDFP    D  R + +++ L F++EPL+       EADN+S LL M DTI T Y+DA                  D +  R+H   R+ R+ L SKIKTQ +LQ YPG I+LP PL+
Sbjct: 1126 MPEYLLPYLLHLLAHFPDFPTSPHDSVRWRPIQRCLAFVLEPLM--ATLGTEADNLSFLLLMTDTILTRYKDASAAIKRQEKEKNSLINEDDVATERLHQVTRVCREFLRSKIKTQENLQAYPGKIYLPLPLY 1256          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: A0A7S3XUA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUA2_HETAK)

HSP 1 Score: 104 bits (259), Expect = 1.140e-22
Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 0
Query:   37 LERSMPEYVLPYAIHLLAYHPDFP--VHKDDKQRIKNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLF 156
            L  SMPEY++PY IHLLA+ PD        D    K +E+ L   +EPL+       +ADN++ LLQ++ TI T+Y DA+ P +  IH  A +A+ +L   IKTQ +L+PYPG I++PAPLF
Sbjct:    7 LRSSMPEYMVPYVIHLLAHRPDCSRAAGGGDPAAAKRLERCLASALEPLV--HSLGADADNLAFLLQIVSTIQTNYLDAVQPKSPGIHKIANMAQSILRKLIKTQENLKPYPGTIYIPAPLF 126          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: A0A0P1AVQ9_PLAHL (Sister chromatid cohesion complex Cohesin, subunit PDS5 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVQ9_PLAHL)

HSP 1 Score: 87.0 bits (214), Expect = 2.650e-16
Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRIKNMEK---------YLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQ 157
            +PEY LPY IHLLA+HP FP +  +K    ++ +         YL F ++ L+        ADN++ LLQML T  + Y D + P++  ++    +   LL  +IKTQSDL+P+PG IFLP  L+Q
Sbjct:  382 VPEYALPYVIHLLAHHPSFPTNLVEKTSSVSILQSAEWSDQLAYLEFFLDGLV---SPKSAADNIAFLLQML-TKLSQYHDVIAPNDLAMYPLIDMTAMLLKKRIKTQSDLKPFPGKIFLPKHLYQ 503          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: A0A0P1A5B3_PLAHL (Sister chromatid cohesion complex Cohesin, subunit PDS5 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5B3_PLAHL)

HSP 1 Score: 87.0 bits (214), Expect = 2.770e-16
Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRIKNMEK---------YLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQ 157
            +PEY LPY IHLLA+HP FP +  +K    ++ +         YL F ++ L+        ADN++ LLQML T  + Y D + P++  ++    +   LL  +IKTQSDL+P+PG IFLP  L+Q
Sbjct:  620 VPEYALPYVIHLLAHHPSFPTNLVEKTSSVSILQSAEWSDQLAYLEFFLDGLV---SPKSAADNIAFLLQML-TKLSQYHDVIAPNDLAMYPLIDMTAMLLKKRIKTQSDLKPFPGKIFLPKHLYQ 741          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: G4YMS1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMS1_PHYSP)

HSP 1 Score: 82.0 bits (201), Expect = 1.600e-14
Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRI---------KNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLF 156
            +PEY LPY IHLLA+HP+FPV   ++             +   YL F ++ L+        ADN++ LLQML  ++  + DA  P +  I+     A  LL  KIK QS+L+P+PG IFLP  L+
Sbjct: 1155 VPEYALPYVIHLLAHHPEFPVKLVERTPTVVVLQSALWTDQLAYLGFFLDGLV--STNAAAADNIAFLLQMLTKLSQCH-DATSPDDINIYPLIDSAVALLKKKIKNQSNLKPFPGKIFLPKHLY 1276          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: H3GJE0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJE0_PHYRM)

HSP 1 Score: 81.6 bits (200), Expect = 2.180e-14
Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRI---------KNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLF 156
            +PEY LPY IHLLA+HP FPV   +K             N   YL F ++ L+        ADN++ LLQ+L  ++  + D L P +  I+     A  LL  KIK QS+L+P+PG IFLP  L+
Sbjct: 1144 VPEYALPYVIHLLAHHPHFPVKLVEKTAHVMILQSPLWTNQLGYLGFFLDGLV--STNGAAADNIAFLLQILTKLSQCH-DVLSPESKHIYPLIDSAVVLLKKKIKKQSNLKPFPGKIFLPKHLY 1265          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: A0A6A3I6F7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I6F7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.960e-14
Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRI---------KNMEKYLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLF 156
            +PEY LPY IHLLA+HPDFPV   ++             +   YL F ++ L+        ADN++ LLQML  ++  + D   P++  I+     A  LL  KIK QS+L+P+PG IFLP  L+
Sbjct: 1150 VPEYALPYVIHLLAHHPDFPVKLVERTPSVVVLQSALWTDQLAYLGFFLDGLV--STNATAADNIAFLLQMLTKLSQCH-DVTSPNDINIYPLIDSAVALLKKKIKNQSNLKPFPGKIFLPKHLY 1271          
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Match: D0NH43_PHYIT (Sister chromatid cohesion protein PDS5 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH43_PHYIT)

HSP 1 Score: 80.9 bits (198), Expect = 3.960e-14
Identity = 48/125 (38.40%), Postives = 70/125 (56.00%), Query Frame = 0
Query:   41 MPEYVLPYAIHLLAYHPDFPVHKDDKQRIKNMEK---------YLNFLIEPLIVDGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLF 156
            +PEY LPY IHLLA+HP FPV   ++     +           YL+F ++ L+        ADN++ LLQML  ++  + D   PS+  I+     A  LL  +IK+QS+L+P+PG IFLP  L+
Sbjct: 1123 VPEYALPYVIHLLAHHPSFPVKLVERTSTVEVLSSALWADQLAYLSFFLDGLVATN--AAAADNIAFLLQMLTKLSQCH-DVAAPSDINIYPLIDSAAVLLKKRIKSQSNLKPFPGKIFLPKHLY 1244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12396.1981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV7_ECTSI5.430e-7096.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWB1_9PHAE8.780e-6994.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TFJ9_9STRA7.680e-2444.36Sister chromatid cohesion protein pds5 n=2 Tax=Mon... [more]
A0A7S3XUA2_HETAK1.140e-2245.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0P1AVQ9_PLAHL2.650e-1639.68Sister chromatid cohesion complex Cohesin, subunit... [more]
A0A0P1A5B3_PLAHL2.770e-1639.68Sister chromatid cohesion complex Cohesin, subunit... [more]
G4YMS1_PHYSP1.600e-1439.20Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
H3GJE0_PHYRM2.180e-1440.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3I6F7_9STRA2.960e-1439.20Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
D0NH43_PHYIT3.960e-1438.40Sister chromatid cohesion protein PDS5 n=3 Tax=Phy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12396contigEcto-sp13_S_contig12396:1563..3353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12396.1981.1mRNA_Ecto-sp13_S_contig12396.1981.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12396 1563..3353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12396.1981.1 ID=prot_Ecto-sp13_S_contig12396.1981.1|Name=mRNA_Ecto-sp13_S_contig12396.1981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
ATAADDDDVDDAGSEGGGGGSPASTKASSAAAAAAALERSMPEYVLPYAI
HLLAYHPDFPVHKDDKQRIKNMEKYLNFLIEPLIVDGRQTGEADNMSMLL
QMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIF
LPAPLFQRRRREDETPSSSSSPPPREAAGFSSPAAAPAARYRRRSRSSAA
GAAAATPTS
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