mRNA_Ecto-sp13_S_contig8445.19825.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8445.19825.1
Unique NamemRNA_Ecto-sp13_S_contig8445.19825.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.120e-57
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRSTEQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFDED 303
            LQPF TWGGYSSGKAARDMFHR   VLATEQASIGGLKVLNYAPGPMNTDM+R+IRS EQFEEDLQSGKL+DARVSAEKCVRLALHGTFASGSHVD+FDED
Sbjct:  209 LQPFETWGGYSSGKAARDMFHR---VLATEQASIGGLKVLNYAPGPMNTDMSRDIRSAEQFEEDLQSGKLIDARVSAEKCVRLALHGTFASGSHVDFFDED 306
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: D0NIS8_PHYIT (Sepiapterin reductase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NIS8_PHYIT)

HSP 1 Score: 96.3 bits (238), Expect = 1.600e-22
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRSTEQFEEDLQS--------GKLVDARVSAEKCVRLALHGTFASGSHVDYFDED 303
            ++PF T   Y +GKAAR+M HR   V+ATEQA+IG ++VL Y+PGPM+TDM + +R T Q + +L+         G L+    S+E+ V+LA+ G + +G+HVDY+D D
Sbjct:  110 IEPFKTHMLYCTGKAAREMHHR---VVATEQAAIGKVRVLQYSPGPMDTDMQKTLRETPQLDPELRKQFADMKAKGALIPPAQSSERGVKLAISGDYETGAHVDYYDLD 215
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: M4BPV9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPV9_HYAAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.410e-21
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRST--------EQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFDED 303
            ++PF T   Y +GKAAR+M HR   V+ATEQA++   +VL Y+PGPM+T+M + IR +        EQF E    G L+    S+E+ VRLA+ G F SG+H+DY+D D
Sbjct:   58 IEPFKTHMMYCTGKAAREMHHR---VIATEQAALDKARVLQYSPGPMDTEMQQTIRESPLVDPGLREQFVEMKTRGTLIPPAKSSERGVRLAISGEFESGAHMDYYDLD 163
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: W2Q6D1_PHYPN (Sepiapterin reductase n=12 Tax=Phytophthora TaxID=4783 RepID=W2Q6D1_PHYPN)

HSP 1 Score: 94.7 bits (234), Expect = 2.100e-21
Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRSTEQFEEDLQS--------GKLVDARVSAEKCVRLALHGTFASGSHVDYFDED 303
            ++PF T   Y +GKAAR+M HR   V+ATEQA++G ++VL Y+PGPM+TDM + +R T Q + +L+         G L+    S+E+ V+LA+ G + +G+HVD++D D
Sbjct:  176 IEPFKTHMLYCTGKAAREMHHR---VIATEQAAVGKVRVLQYSPGPMDTDMQKTLRETPQLDPELRKQFADMKAQGTLIPPAQSSERGVKLAISGDYETGAHVDFYDLD 281
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: A0A225UVY8_9STRA (Sepiapterin reductase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UVY8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.100e-21
Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRST--------EQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFDED 303
            ++PF T   Y SGKAAR+M HR   V+ATEQA  G  +VL Y+PGPM+TDM + IR +        +QFE+    G L+    S+E+ V+LA++G + +G+HVDY+D D
Sbjct:  176 IEPFKTHMLYCSGKAAREMHHR---VIATEQAVAGKTRVLQYSPGPMDTDMQKTIRESPRVDPELRQQFEDMKTQGTLIPPAQSSERGVKLAINGEYETGAHVDYYDLD 281
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: A0A485MFE0_LYNPA (Sepiapterin reductase n=1 Tax=Lynx pardinus TaxID=191816 RepID=A0A485MFE0_LYNPA)

HSP 1 Score: 93.2 bits (230), Expect = 2.940e-21
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRST-------EQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFDE 300
            LQPF  WG Y +GKAARDM  R   VLATE+ S+   +VL+YAPGP++TDM +  R T       ++ +E    G+LVD  VSAEK + L    TF SG+HVD++D+
Sbjct:  130 LQPFKGWGLYCAGKAARDMMFR---VLATEEPSV---RVLSYAPGPLDTDMQQSARETSMDPDLRKRLQELKTKGELVDCTVSAEKLLSLLQKDTFKSGAHVDFYDK 230
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: A0A6A3RA53_9STRA (Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RA53_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.050e-20
Identity = 48/109 (44.04%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRST--------EQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFDED 303
            ++PF T   Y SGKAAR+M HR   V+ATEQ + G ++VL Y+PGPM+TDM + IR +        +QFE+    G L+    S+++ V+LA+ G + +G+HVDY+D D
Sbjct:  171 IEPFKTHMMYCSGKAAREMHHR---VIATEQEAAGKVRVLQYSPGPMDTDMQKTIRESPRVDPELRKQFEDMKAQGTLIPPAQSSQRGVKLAISGDYETGAHVDYYDLD 276
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: A0A8C5TJ03_9PASS (Sepiapterin reductase n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5TJ03_9PASS)

HSP 1 Score: 91.3 bits (225), Expect = 1.330e-20
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRST-------EQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFD 297
            LQPF +WG Y SGKAARDM  R   VLA E+    G++VL+YAPGP++TDM    R+        +QF+   ++G+L+D+ VSA+K ++L    +F SG+HVD++D
Sbjct:  120 LQPFHSWGLYCSGKAARDMLFR---VLALEEP---GIRVLSYAPGPLDTDMQLVARTQTADPGMRQQFQRLQENGQLIDSSVSAQKLLQLLQEDSFPSGAHVDFYD 219
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: H9G4I3_ANOCA (Sepiapterin reductase n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9G4I3_ANOCA)

HSP 1 Score: 89.7 bits (221), Expect = 1.590e-20
Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRSTEQ-------FEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFD 297
            LQPF +W  Y +GKAARDM  R   VLA E+  +   +VL+YAPGP++TDM  E+R+  +       F E  + GKL+D  VSA K + L L  TF SG+H+D++D
Sbjct:   67 LQPFKSWSLYCTGKAARDMMFR---VLAQEEPDV---RVLSYAPGPLDTDMQEEVRTKSRDPKLRQIFLEMKEEGKLLDCDVSARKLLDLLLADTFESGAHIDFYD 166
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BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Match: A0A0P1AK78_PLAHL (Sepiapterin reductase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK78_PLAHL)

HSP 1 Score: 92.4 bits (228), Expect = 1.690e-20
Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 1 
Query:    1 LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTDMAREIRSTEQFEEDLQS--------GKLVDARVSAEKCVRLALHGTFASGSHVDYFD 297
            ++PF T   Y +GKAAR+M HR   V+ATEQA+   ++VL Y+PGPM+T+M R IR +   + +LQ+        G+LV    S+ +CV+LA++G F SG+HVDY D
Sbjct:  175 IKPFKTHMLYCTGKAAREMHHR---VIATEQAAGNKVQVLQYSPGPMDTEMQRTIRESPNVDTELQTKFREMKANGELVPTAQSSLRCVKLAINGNFESGAHVDYCD 278
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8445.19825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR4_ECTSI1.120e-5791.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D0NIS8_PHYIT1.600e-2244.95Sepiapterin reductase, putative n=1 Tax=Phytophtho... [more]
M4BPV9_HYAAE1.410e-2145.87Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
W2Q6D1_PHYPN2.100e-2143.12Sepiapterin reductase n=12 Tax=Phytophthora TaxID=... [more]
A0A225UVY8_9STRA2.100e-2145.87Sepiapterin reductase n=1 Tax=Phytophthora megakar... [more]
A0A485MFE0_LYNPA2.940e-2148.60Sepiapterin reductase n=1 Tax=Lynx pardinus TaxID=... [more]
A0A6A3RA53_9STRA1.050e-2044.04Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4... [more]
A0A8C5TJ03_9PASS1.330e-2046.23Sepiapterin reductase n=1 Tax=Malurus cyaneus samu... [more]
H9G4I3_ANOCA1.590e-2046.23Sepiapterin reductase n=2 Tax=Anolis carolinensis ... [more]
A0A0P1AK78_PLAHL1.690e-2045.79Sepiapterin reductase n=1 Tax=Plasmopara halstedii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8445contigEcto-sp13_S_contig8445:3..792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score188.7
Seed ortholog evalue1.3e-45
Seed eggNOG ortholog2880.D7FQR4
Preferred nameSPR
Model size306
KEGG rclassRC00017,RC00425,RC00602,RC00823,RC02162
KEGG koko:K00072,ko:K05858,ko:K16489
KEGG ReactionR01813,R02975,R03332,R03435,R08208,R10952,R11762,R11763
KEGG Pathwayko00562,ko00790,ko01100,ko04015,ko04020,ko04022,ko04062,ko04070,ko04071,ko04072,ko04261,ko04270,ko04310,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04745,ko04750,ko04911,ko04912,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04924,ko04925,ko04926,ko04927,ko04933,ko04934,ko04961,ko04970,ko04971,ko04972,ko05010,ko05016,ko05142,ko05143,ko05146,ko05200,map00562,map00790,map01100,map04015,map04020,map04022,map04062,map04070,map04071,map04072,map04261,map04270,map04310,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04745,map04750,map04911,map04912,map04915,map04916,map04918,map04919,map04921,map04922,map04924,map04925,map04926,map04927,map04933,map04934,map04961,map04970,map04971,map04972,map05010,map05016,map05142,map05143,map05146,map05200
KEGG ModuleM00130,M00842
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000904,GO:0001505,GO:0003674,GO:0003824,GO:0004033,GO:0004757,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006558,GO:0006584,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0006809,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009108,GO:0009653,GO:0009712,GO:0009987,GO:0010033,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0018958,GO:0019222,GO:0019438,GO:0019751,GO:0019752,GO:0019889,GO:0022008,GO:0030154,GO:0030182,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032768,GO:0032989,GO:0034311,GO:0034312,GO:0034641,GO:0036094,GO:0040008,GO:0040014,GO:0042133,GO:0042136,GO:0042221,GO:0042415,GO:0042417,GO:0042428,GO:0042430,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046209,GO:0046483,GO:0046983,GO:0048037,GO:0048468,GO:0048638,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0050999,GO:0051186,GO:0051188,GO:0051239,GO:0051341,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0072593,GO:0097159,GO:0097164,GO:1901160,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1902221,GO:1903409,GO:2001057
Exons2
EggNOG free text desc.sepiapterin reductase
EggNOG OGsCOG1028@1,KOG1204@2759
EC1.1.1.153,3.1.4.11
Cds size306
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464114.1363125-CDS-Ecto-sp13_S_contig8445:2..761681464114.1363125-CDS-Ecto-sp13_S_contig8445:2..76Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8445 3..76 +
1681464114.1514568-CDS-Ecto-sp13_S_contig8445:560..7921681464114.1514568-CDS-Ecto-sp13_S_contig8445:560..792Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8445 561..792 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8445.19825.1prot_Ecto-sp13_S_contig8445.19825.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8445 3..792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8445.19825.1

>prot_Ecto-sp13_S_contig8445.19825.1 ID=prot_Ecto-sp13_S_contig8445.19825.1|Name=mRNA_Ecto-sp13_S_contig8445.19825.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp
LQPFVTWGGYSSGKAARDMFHRRDTVLATEQASIGGLKVLNYAPGPMNTD
MAREIRSTEQFEEDLQSGKLVDARVSAEKCVRLALHGTFASGSHVDYFDE
D*
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mRNA from alignment at Ecto-sp13_S_contig8445:3..792+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8445.19825.1 ID=mRNA_Ecto-sp13_S_contig8445.19825.1|Name=mRNA_Ecto-sp13_S_contig8445.19825.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=790bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8445:3..792+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTGCAACCATTTGTGACCTGGGGAGGGTACAGCTCGGGGAAGGCTGCTCG
AGACATGTTCCACAGGCGAGATACGTGTATTCGTTTATGTTGGTGCTTCA
ATATTGTTTGTATTAAGCCTCGTCGGGTTATTCTTGTCGCGTGAATCTCG
CAACAATGGAATGCTCATGTTTATTGAGAGTCGTTCTGGAACGTGCGGCA
TCATTTAGGGCTGGCATGCAACCTGTTTTGACCAATCGAGAAGGTAGGCT
GGATGAGCAATAACGGATTATTGACGGCCGCTCGCCTCGCACTGAACAGT
GCACTGAGGTCGTCGAATTGCGCAACACCAGAGAAATTCACGCTCCCAAA
GCCCTGTGCTCTACGAAATCATTTTTAGCTGCTGCCCTCCTATTTGCTGT
AGTGCACTTTCGACCTGCCGACAATACACGAATGCATGGATGACACGGTC
TTGCCGGCCTTTGCCACCGAACTTTACTATATCTTCACTAGTCAGTTTCG
AAACGAAATGTTTCTCATATGGGTTTGGTCAATTCCAATTATGATGTCTC
CCGAGCAGGGTACTGGCGACGGAACAAGCATCTATCGGGGGCCTCAAGGT
GCTCAACTATGCTCCAGGGCCTATGAACACGGACATGGCGAGAGAGATCC
GATCGACGGAGCAGTTCGAGGAGGACTTGCAAAGCGGGAAGCTCGTAGAT
GCCAGGGTTTCGGCAGAAAAGTGCGTAAGGCTTGCGCTGCATGGGACGTT
CGCCAGTGGGTCGCACGTGGACTATTTTGACGAGGACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8445:3..792+

>mRNA_Ecto-sp13_S_contig8445.19825.1 ID=mRNA_Ecto-sp13_S_contig8445.19825.1|Name=mRNA_Ecto-sp13_S_contig8445.19825.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=306bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8445:3..792+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTGCAACCATTTGTGACCTGGGGAGGGTACAGCTCGGGGAAGGCTGCTCG
AGACATGTTCCACAGGCGAGATACGGTACTGGCGACGGAACAAGCATCTA
TCGGGGGCCTCAAGGTGCTCAACTATGCTCCAGGGCCTATGAACACGGAC
ATGGCGAGAGAGATCCGATCGACGGAGCAGTTCGAGGAGGACTTGCAAAG
CGGGAAGCTCGTAGATGCCAGGGTTTCGGCAGAAAAGTGCGTAAGGCTTG
CGCTGCATGGGACGTTCGCCAGTGGGTCGCACGTGGACTATTTTGACGAG
GACTGA
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