prot_Ecto-sp13_S_contig844.19822.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig844.19822.1
Unique Nameprot_Ecto-sp13_S_contig844.19822.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length380
Homology
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BLAST of mRNA_Ecto-sp13_S_contig844.19822.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI)

HSP 1 Score: 640 bits (1650), Expect = 6.010e-228
Identity = 372/379 (98.15%), Postives = 376/379 (99.21%), Query Frame = 0 
Query:    1 MDFTFARFALNMAMASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLLQVCISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDRVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYVNQFAALRLLEAGADKAACDLIRDSDKTRHSNVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKQCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSE 379
            MDFTFARFALNMA+ASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVL+Q CISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRRED VTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAY+NQFAALRLLEAGADKAACDLIRDSDKTRHS+VIEAAFICLANLANNPLNQAHVGAGDSVELALSVCK CQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSE
Sbjct:    1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSE 379
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig844.19822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZR7_ECTSI6.010e-22898.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 191..235
e-value: 170.0
score: 3.7
coord: 148..189
e-value: 11.0
score: 13.0
coord: 17..57
e-value: 18.0
score: 11.2
coord: 100..146
e-value: 4.4
score: 16.0
coord: 58..99
e-value: 76.0
score: 6.4
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 111..159
score: 9.572
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 5..219
e-value: 1.3E-25
score: 91.8
NoneNo IPR availablePANTHERPTHR46241FAMILY NOT NAMEDcoord: 15..294
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 19..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig844contigEcto-sp13_S_contig844:16350..20768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig844.19822.1mRNA_Ecto-sp13_S_contig844.19822.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig844 16350..21181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig844.19822.1 ID=prot_Ecto-sp13_S_contig844.19822.1|Name=mRNA_Ecto-sp13_S_contig844.19822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp
MDFTFARFALNMAMASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVL
ALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLLQVCISIAQLSRY
PPNRAIIAAKGGVAAMVRLLEGFRREDRVTEQVIGQALTALVNVTYRSDA
NRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYVNQFAALRLLE
AGADKAACDLIRDSDKTRHSNVIEAAFICLANLANNPLNQAHVGAGDSVE
LALSVCKQCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAA
AWGVAEDDAGGSSEQTSTMSSSRSAAATAAAAEEEGTAAGQAASCVAILM
QHPTNALAMKRAGGLKELAELIFDSEHSEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold