prot_Ecto-sp13_S_contig8436.19817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8436.19817.1
Unique Nameprot_Ecto-sp13_S_contig8436.19817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length414
Homology
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: D7G6B8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B8_ECTSI)

HSP 1 Score: 735 bits (1897), Expect = 4.330e-260
Identity = 374/414 (90.34%), Postives = 386/414 (93.24%), Query Frame = 0
Query:    1 MSYSLDAADGALRARIAPADVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAIPPPPVRSRPSATGAAMSASEGACEEKEVRVRVEVVPTSTMERDVFVGLGGDVGAMSSDDLHRRWSCGVQTASATAGAASSSELRSSWRESHDRSHSTMPMHSEGELFSTSCQVLHGADSLSCSGHADVGSHFTGASPCRSPDSHCAEGGRMDPMCLERHSSPRIPSSNFGDDASASALPARGGNTAPFETSNVGGSDAACLRKRWHEAMEFGDVGDMPVSGLAGRLTLATDLRTCSEGVTPFETSDVGGSDAACLGKRWHEAMEIGHVGDMPVSELSGRLTLATDL 414
            MS SLDAADGALR  IAPADVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAIPPPPVRSRP+ATGAAMSASEGACEEKEVRVRV VVPTST +R+V  GLGGDVGAMSSDDL RRWSCGVQTAS+TAGAASSSELRSSWRESHDRS S MP+HSEG+LF TSCQVLHGADSLSCSGHAD+GSHFTGASP RSPDS CA GGR++ MCLERHSS RIP SNFG DASASALPARG NT PFETS+VGG DAACLRKR HEAMEFGDVGDMPVS LAGRLTLATDLRTCSE VTPFETSDVGGSDAACLGKRWHEAMEIG VGD  V+EL+GRLTLA DL
Sbjct:    1 MSCSLDAADGALRTGIAPADVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAIPPPPVRSRPTATGAAMSASEGACEEKEVRVRVGVVPTSTTQREVLFGLGGDVGAMSSDDLRRRWSCGVQTASSTAGAASSSELRSSWRESHDRSRSPMPIHSEGDLFGTSCQVLHGADSLSCSGHADIGSHFTGASPRRSPDSQCAGGGRVNSMCLERHSSLRIPPSNFGIDASASALPARGENTTPFETSDVGGLDAACLRKRRHEAMEFGDVGDMPVSELAGRLTLATDLRTCSEDVTPFETSDVGGSDAACLGKRWHEAMEIGDVGDQRVNELTGRLTLAADL 414          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: A0A6H5JF26_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF26_9PHAE)

HSP 1 Score: 721 bits (1860), Expect = 2.850e-255
Identity = 367/414 (88.65%), Postives = 380/414 (91.79%), Query Frame = 0
Query:    1 MSYSLDAADGALRARIAPADVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAIPPPPVRSRPSATGAAMSASEGACEEKEVRVRVEVVPTSTMERDVFVGLGGDVGAMSSDDLHRRWSCGVQTASATAGAASSSELRSSWRESHDRSHSTMPMHSEGELFSTSCQVLHGADSLSCSGHADVGSHFTGASPCRSPDSHCAEGGRMDPMCLERHSSPRIPSSNFGDDASASALPARGGNTAPFETSNVGGSDAACLRKRWHEAMEFGDVGDMPVSGLAGRLTLATDLRTCSEGVTPFETSDVGGSDAACLGKRWHEAMEIGHVGDMPVSELSGRLTLATDL 414
            MS SLDAADG LRA IAPADVFILSRLNDTTSYFF WFCKKYRIQIGPPRGLGGKEE TRCPICLDSCTKSIELQCGHSFCRSCLI+SAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAI PPP+RSRPSAT AAMSASEGA EEK+VRVRV+VVPTST  R+VFVGLGGDVGAMSSDDL RRWSCGV TASATAGAASSSELRSSWRESHDRS S MPMHSEGEL  TSCQVLHGADS+SCSGHAD+GSHFTGASP RSPDS CA  GR+D MCLERHSSPRIPSSNFGDDASASALPARGGNT PFETS+VGG DAACLRKRWHEAMEFGDVGDMPVS LA  LTLATDLRTCSE +TPFET DVGGSDAA LGKRWHEA+E G VGDMPVSEL+GRL+   DL
Sbjct:    1 MSCSLDAADGTLRAGIAPADVFILSRLNDTTSYFFAWFCKKYRIQIGPPRGLGGKEENTRCPICLDSCTKSIELQCGHSFCRSCLIRSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAILPPPLRSRPSATSAAMSASEGAYEEKDVRVRVKVVPTSTTGREVFVGLGGDVGAMSSDDLRRRWSCGVHTASATAGAASSSELRSSWRESHDRSRSLMPMHSEGELCGTSCQVLHGADSVSCSGHADIGSHFTGASPRRSPDSQCAGRGRVDSMCLERHSSPRIPSSNFGDDASASALPARGGNTTPFETSDVGGLDAACLRKRWHEAMEFGDVGDMPVSELAESLTLATDLRTCSEDMTPFETRDVGGSDAAFLGKRWHEAIETGDVGDMPVSELAGRLSREADL 414          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: A0A836CQW4_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQW4_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.580e-29
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 0
Query:   20 DVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRL 126
            D FI++RLND TSYF TWFCK +R+++            + CPICLD+ T SI+LQCGH+FCRSCL  SAA N T+CALCRREQ + P++LR +FD++RM NLA+RL
Sbjct:  212 DNFIVARLNDETSYFMTWFCKHFRLRLNTA--------PSSCPICLDTVTNSIQLQCGHAFCRSCLAASAACNFTTCALCRREQILHPDELRQQFDQRRMANLARRL 310          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: A0A4D9CMH2_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CMH2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.670e-23
Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   20 DVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRL 126
            DVF LSRLND T+YFF W CK+Y        GL  K E   CPICL++   SI+L CGH+FCR CL  +A   M+SCALCR+   +DP+ LR +F  QR  N++ RL
Sbjct:   69 DVFYLSRLNDPTTYFFQWICKRY--------GLTVKAEPHSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRL 167          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: A0A7S3XVA3_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA3_HETAK)

HSP 1 Score: 111 bits (278), Expect = 6.530e-23
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   20 DVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQR 125
            DVF++SR+ND +SYF+TWFCK++  ++        K  K  CPICL+S   SIELQCGHSFCR CL  SA   ++ C LCR    ++PE LR  F++QR+ NL +R
Sbjct:   40 DVFLVSRMNDESSYFYTWFCKRFEFKLK-----ANKTYKENCPICLESELHSIELQCGHSFCRGCLTHSAEMKISCCPLCRANICLNPEVLRKNFEDQRIRNLMRR 140          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: A0A7R9UUM7_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UUM7_DIALT)

HSP 1 Score: 54.3 bits (129), Expect = 1.630e-5
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   56 EEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSA--ANNMTSCALCRREQEIDP 107
            E+   CPICL S  + + L+CGH+FCR CL+QS   A +  +C LCRR    DP
Sbjct:   22 EKACECPICLHSLCEPLSLECGHAFCRLCLLQSTRLAPDGRACPLCRRLVGADP 75          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: A0A8D3AMW2_SCOMX (Uncharacterized protein n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3AMW2_SCOMX)

HSP 1 Score: 57.4 bits (137), Expect = 3.070e-5
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   56 EEKTRCPICLDSCTKSIELQCGHSFCRSCLIQS-AANNMTSCALCRR 101
            E+  RCPICLD  T  + LQCGH+FC+ C++++   N +  CALC+R
Sbjct:   14 EQHFRCPICLDVLTAPVTLQCGHNFCKKCIVENWRINRIRQCALCKR 60          
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Match: UPI0018F55B42 (zinc-binding protein A33-like n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F55B42)

HSP 1 Score: 55.8 bits (133), Expect = 8.650e-5
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   57 EKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRRE 102
            E+T CPICLD   + + L CGHSFCRSC+ Q     + SC  CR E
Sbjct:   12 EETICPICLDFFIEPVSLDCGHSFCRSCISQCWEREINSCPECREE 57          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8436.19817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G6B8_ECTSI4.330e-26090.34RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF26_9PHAE2.850e-25588.65RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CQW4_9STRA2.580e-2957.94RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A4D9CMH2_9STRA1.670e-2351.40RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S3XVA3_HETAK6.530e-2350.00Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7R9UUM7_DIALT1.630e-548.15Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A8D3AMW2_SCOMX3.070e-548.94Uncharacterized protein n=3 Tax=Scophthalmus maxim... [more]
UPI0018F55B428.650e-552.17zinc-binding protein A33-like n=1 Tax=Scyliorhinus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 61..99
e-value: 2.3E-6
score: 37.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 60..100
e-value: 3.1E-6
score: 27.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 61..100
score: 11.575
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 53..157
e-value: 2.6E-13
score: 52.0
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 76..85
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 57..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8436contigEcto-sp13_S_contig8436:10..1251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8436.19817.1mRNA_Ecto-sp13_S_contig8436.19817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8436 10..1251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8436.19817.1 ID=prot_Ecto-sp13_S_contig8436.19817.1|Name=mRNA_Ecto-sp13_S_contig8436.19817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=414bp
MSYSLDAADGALRARIAPADVFILSRLNDTTSYFFTWFCKKYRIQIGPPR
GLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCR
REQEIDPEQLRARFDEQRMLNLAQRLAIPPPPVRSRPSATGAAMSASEGA
CEEKEVRVRVEVVPTSTMERDVFVGLGGDVGAMSSDDLHRRWSCGVQTAS
ATAGAASSSELRSSWRESHDRSHSTMPMHSEGELFSTSCQVLHGADSLSC
SGHADVGSHFTGASPCRSPDSHCAEGGRMDPMCLERHSSPRIPSSNFGDD
ASASALPARGGNTAPFETSNVGGSDAACLRKRWHEAMEFGDVGDMPVSGL
AGRLTLATDLRTCSEGVTPFETSDVGGSDAACLGKRWHEAMEIGHVGDMP
VSELSGRLTLATDL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS