prot_Ecto-sp13_S_contig84351.19816.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84351.19816.1
Unique Nameprot_Ecto-sp13_S_contig84351.19816.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
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BLAST of mRNA_Ecto-sp13_S_contig84351.19816.1 vs. uniprot
Match: A0A5A8DUJ1_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUJ1_CAFRO)

HSP 1 Score: 50.1 bits (118), Expect = 3.080e-5
Identity = 35/73 (47.95%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:    4 LPPSLLA-AFGRRNSLDVVMALLREGRARRDVNKVTRWLHHTPLYCAALHGHADIALALLRAGADVDLPDTHG 75
            L PSLLA A     S + V AL ++ R   DVN V   L  TPL  A ++G AD+AL LLRAGA+   P  HG
Sbjct:  979 LEPSLLARAVSLGGSSEAVAALAQDERV--DVNAVCPALKRTPLELACMNGAADLALLLLRAGAEPACPTLHG 1049
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84351.19816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5A8DUJ1_CAFRO3.080e-547.95Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 41..70
e-value: 5.6E-4
score: 29.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 41..73
score: 11.434
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 10..71
e-value: 8.1E-7
score: 29.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 14..76
score: 12.541
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..76
e-value: 4.2E-12
score: 47.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 14..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84351contigEcto-sp13_S_contig84351:139..366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84351.19816.1mRNA_Ecto-sp13_S_contig84351.19816.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84351 139..366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84351.19816.1 ID=prot_Ecto-sp13_S_contig84351.19816.1|Name=mRNA_Ecto-sp13_S_contig84351.19816.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
TVLLPPSLLAAFGRRNSLDVVMALLREGRARRDVNKVTRWLHHTPLYCAA
LHGHADIALALLRAGADVDLPDTHGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf