prot_Ecto-sp13_S_contig8434.19815.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8434.19815.1
Unique Nameprot_Ecto-sp13_S_contig8434.19815.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length175
Homology
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A6H5KGH2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH2_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.670e-90
Identity = 158/175 (90.29%), Postives = 161/175 (92.00%), Query Frame = 0
Query:    1 MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPASLRAMAPMRGLXXXXXXXXXXVYTLHYEVSPYRTRFLLQPALVIGKTLVTVILAAHLLSCFWFWV 175
            MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTERQEIARRY+TSWFFLDLVTCLPYTTLLRSVIPASLRAMAP+RGL   XXXXXXXVY LHYEVSP         A+ IGKTLVTVILAAHLLSCFWFWV
Sbjct:   76 MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTERQEIARRYITSWFFLDLVTCLPYTTLLRSVIPASLRAMAPVRGLRLLXXXXXXXVYALHYEVSPV--------AMSIGKTLVTVILAAHLLSCFWFWV 242          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: D7FJ53_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ53_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 9.140e-89
Identity = 157/175 (89.71%), Postives = 162/175 (92.57%), Query Frame = 0
Query:    1 MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPASLRAMAPMRGLXXXXXXXXXXVYTLHYEVSPYRTRFLLQPALVIGKTLVTVILAAHLLSCFWFWV 175
            MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPA+AFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTER+EIARRY+TSWFFLDLVTCLPYTTLLRSV+PASLR MAPMRGL  XXXXXXXXVYTLHYEVSP         A+ IGKTLVTVILAAHLLSCFWFWV
Sbjct:   23 MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPAHAFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTERKEIARRYITSWFFLDLVTCLPYTTLLRSVVPASLRVMAPMRGLRLXXXXXXXXVYTLHYEVSPV--------AMSIGKTLVTVILAAHLLSCFWFWV 189          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: D8LJT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT9_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 6.000e-11
Identity = 60/175 (34.29%), Postives = 98/175 (56.00%), Query Frame = 0
Query:    4 YIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESGLLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPA--SLRAMAPMRGLXXXXXXXXXXVYTLHYEVSPYRTRFLLQPALV-IGKTLVTVILAAHLLSCFWFWV 175
            +IV P   R   W  ++   I+++++V PWRISF+  A+   L    + +  F +D +L F +A   E  L+ +R  IAR+YV++WF  D++  +P+ +L+   I    SL+++  +R  XXXXXXXXXX      +++       L P++V + K L  ++ A HLL C WF V
Sbjct:  109 FIVHPNDPRKLYWDLFVGAMILYSIVVIPWRISFKQDASGAMLIFDYLVDAIFGIDIILCFNSAYFEEDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMV 283          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A6A2ZG68_HIBSY (Potassium channel n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZG68_HIBSY)

HSP 1 Score: 70.1 bits (170), Expect = 8.140e-11
Identity = 38/113 (33.63%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    2 SKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLA-AIANISFIVDTVLHFFTAVV--TESGLLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPAS 111
            S++I+ P  SR + W+ +M + +     V P+ I+F  P     L +A  +AN  F VD VL F  A +  T   L+ +R++IA+RY+++WF +DL + +P+  L+R +   S
Sbjct:  440 SRWIISPMDSRYRCWETFMVMLVYHLAFVYPFEIAFLTPVPPVALYVADTVANSFFAVDIVLTFLVAYIDSTTQLLVLDREKIAKRYLSTWFIMDLASTIPFEALIRLLFTKS 552          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A4D8YKX5_SALSN (Potassium channel n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8YKX5_SALSN)

HSP 1 Score: 68.2 bits (165), Expect = 3.650e-10
Identity = 40/113 (35.40%), Postives = 68/113 (60.18%), Query Frame = 0
Query:    4 YIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRC-PANAFGLTLAAIANISFIVDTVLHFFTAVVTESG--LLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPASLR 113
            +IV P   R ++W+N++ V +++T  V+P+   F   PA    +T   I N  F +D VL FF A +  S   L+ +R+ IA++Y+ SWFFLD+++ +P + L R ++P  L+
Sbjct:   60 FIVSPYDRRYRAWQNFLIVLVVYTAWVSPFEFGFLDKPARPLSIT-DNIVNGFFFIDIVLTFFVAYLDRSTYLLVDDRKRIAKKYLLSWFFLDVISTIP-SELARKIMPEPLQ 170          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A8J5FS19_ZINOF (Potassium channel n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FS19_ZINOF)

HSP 1 Score: 67.0 bits (162), Expect = 9.130e-10
Identity = 36/111 (32.43%), Postives = 64/111 (57.66%), Query Frame = 0
Query:    1 MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESG--LLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIP 109
            + K+IV P   + ++W++ +F+ +++T  V+P+   F    N        I N  F +D VL FF A + E+   L+ + + IA+RY+TSWF LD+V+ +P   +L+ + P
Sbjct:   53 LHKFIVSPYDKKYRTWESILFMLVLYTAWVSPFEFGFLQENNGPFRLADNIVNAFFFIDIVLTFFVAYLDEATYLLVDDPKPIAKRYLTSWFILDIVSTIPSEFMLKLLPP 163          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A444DET6_ENSVE (KHA domain-containing protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444DET6_ENSVE)

HSP 1 Score: 66.6 bits (161), Expect = 1.170e-9
Identity = 34/113 (30.09%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    4 YIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESG--LLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPASLRA 114
            +IV P   R +SW+ ++ + +++T  V+P+   F   +      +  I N  F +D VL FF A +  +   L+  R++IA RY+++WF LD+ + +P + + R ++P +LR+
Sbjct:  117 FIVSPYDRRYRSWETFLVILVVYTAWVSPFEFGFLAKSRGVLALIDNIVNAFFAIDIVLTFFVAYLDRTSYLLIDNRKQIAWRYLSTWFILDVASTIP-SEIARKILPKNLRS 228          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: UPI00098E213F (potassium channel AKT1-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E213F)

HSP 1 Score: 66.2 bits (160), Expect = 1.680e-9
Identity = 51/173 (29.48%), Postives = 83/173 (47.98%), Query Frame = 0
Query:    4 YIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISF-RCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESG--LLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPASLRAMAPMRGLXXXXXXXXXXVYTLHYEVSPYRTRFLLQPALVIGKTLVTVILAAHLLSCFWF 173
            +IV P   R ++W+ ++ + +++T  V+P+   F   P  A  +T   I N  F VD +L FF A +      L+ E + IAR+YV SWF LDL++ +P   L R ++P ++R       L          ++    E       FL++ A +I  TL     A H   CF++
Sbjct:   18 FIVSPYDKRYRAWQTFLILLVVYTAWVSPFEFGFVNRPRGALAVT-DNIVNAFFFVDIILTFFVAYLDRVTYLLIDEHKRIARKYVFSWFILDLISTIP-NELARKILPENVRDFGFFNMLRLWRLRRVSSLFA-RLEKDRNFNYFLIRCAKLICVTL----FAVHCAGCFYY 183          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A078ATT9_STYLE (Cation channel family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ATT9_STYLE)

HSP 1 Score: 66.2 bits (160), Expect = 1.790e-9
Identity = 34/103 (33.01%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    3 KYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVV-TESGLLTERQEIARRYVTSWFFLDLVTCLPYTTLL 104
            K+I+ P     + W+  + + ++FT +VTP+RI+F    +A    +  + + +F VD++L FFTA   ++  L+ +R+ IAR+Y+ SWF +DL++ +P   +L
Sbjct:  504 KFIILPDDVFKERWEITIMLLLLFTAIVTPYRIAFTDTDDAVWSVIDNLTDGTFFVDSILQFFTAYQNSDEELIHDRRLIARKYIKSWFLIDLLSVMPINYML 606          
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Match: A0A6I9RF69_ELAGV (Potassium channel n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RF69_ELAGV)

HSP 1 Score: 65.1 bits (157), Expect = 4.240e-9
Identity = 37/113 (32.74%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    4 YIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAAIANISFIVDTVLHFFTAVVTESG--LLTERQEIARRYVTSWFFLDLVTCLPYTTLLRSVIPASLRA 114
            +IV P   R +SW+ ++ V + +T  V+P+   F   A+    T   + N  F +D VL FF A +  +   L+   ++IA RY+TSWF LD+++ +P + L+  ++P+SL +
Sbjct:   59 FIVSPYDRRYRSWEVFLVVLVAYTAWVSPFEFGFLDKASGALATADNVVNGFFAIDIVLTFFVAFLDRASYLLIDNPKQIAWRYITSWFILDVISTIP-SELVWKILPSSLHS 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8434.19815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGH2_9PHAE1.670e-9090.29Cyclic nucleotide-binding domain-containing protei... [more]
D7FJ53_ECTSI9.140e-8989.71Cyclic nucleotide-binding domain-containing protei... [more]
D8LJT9_ECTSI6.000e-1134.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A2ZG68_HIBSY8.140e-1133.63Potassium channel n=1 Tax=Hibiscus syriacus TaxID=... [more]
A0A4D8YKX5_SALSN3.650e-1035.40Potassium channel n=4 Tax=Salvia TaxID=21880 RepID... [more]
A0A8J5FS19_ZINOF9.130e-1032.43Potassium channel n=4 Tax=Zingiber officinale TaxI... [more]
A0A444DET6_ENSVE1.170e-930.09KHA domain-containing protein n=2 Tax=Ensete ventr... [more]
UPI00098E213F1.680e-929.48potassium channel AKT1-like n=1 Tax=Asparagus offi... [more]
A0A078ATT9_STYLE1.790e-933.01Cation channel family protein n=1 Tax=Stylonychia ... [more]
A0A6I9RF69_ELAGV4.240e-932.74Potassium channel n=4 Tax=Arecaceae TaxID=4710 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 15..174
e-value: 1.1E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 3..175
NoneNo IPR availablePANTHERPTHR10217:SF435POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAGcoord: 3..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 175..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..69
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 15..174
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
NoneNo IPR availableTMHMMTMhelixcoord: 20..37
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8434contigEcto-sp13_S_contig8434:5871..6830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8434.19815.1mRNA_Ecto-sp13_S_contig8434.19815.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8434 5862..6830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8434.19815.1 ID=prot_Ecto-sp13_S_contig8434.19815.1|Name=mRNA_Ecto-sp13_S_contig8434.19815.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp
MSKYIVDPRTSRMQSWKNWMFVNIMFTVLVTPWRISFRCPANAFGLTLAA
IANISFIVDTVLHFFTAVVTESGLLTERQEIARRYVTSWFFLDLVTCLPY
TTLLRSVIPASLRAMAPMRGLRLLKLLKVVKVYTLHYEVSPYRTRFLLQP
ALVIGKTLVTVILAAHLLSCFWFWV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom