prot_Ecto-sp13_S_contig8434.19814.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8434.19814.1
Unique Nameprot_Ecto-sp13_S_contig8434.19814.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length144
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8434.19814.1 vs. uniprot
Match: A0A6H5K572_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K572_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 5.220e-54
Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0 
Query:   32 MAGSEAPAAATAGAAASQRPQRQQPPALGKIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQ--------GKSDSELRADCEACNTTLQGVLSNKKLEVTA 144
            MAGS+AP AATAGAAASQRPQ+QQPPALGKIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQ        G+SDSELRADCEACNTTLQGVLSNKKLE+TA
Sbjct:    1 MAGSKAPEAATAGAAASQRPQQQQPPALGKIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQVWMGVHCSGQSDSELRADCEACNTTLQGVLSNKKLEITA 121
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BLAST of mRNA_Ecto-sp13_S_contig8434.19814.1 vs. uniprot
Match: D7FJ52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ52_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 5.610e-50
Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0 
Query:   32 MAGSEAPAAATAGAAASQRPQRQQPPALGKIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQGKSDSELRADCEACNTTLQGVLSNKKLEVTA 144
            MAGSEAPAAATAG           PPALG+IGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQGKSDSELRADCEACNTTLQGVLSNKKLEVTA
Sbjct:    1 MAGSEAPAAATAGXXXXXXXXXXXPPALGRIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQGKSDSELRADCEACNTTLQGVLSNKKLEVTA 113
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8434.19814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K572_9PHAE5.220e-5489.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ52_ECTSI5.610e-5089.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8434contigEcto-sp13_S_contig8434:1941..4347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8434.19814.1mRNA_Ecto-sp13_S_contig8434.19814.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8434 1939..4347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8434.19814.1 ID=prot_Ecto-sp13_S_contig8434.19814.1|Name=mRNA_Ecto-sp13_S_contig8434.19814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
AQKSRWRAPRGAWASQEGGKHQAANSTLTSAMAGSEAPAAATAGAAASQR
PQRQQPPALGKIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCG
VLRLELRMKHLGQGKSDSELRADCEACNTTLQGVLSNKKLEVTA
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