prot_Ecto-sp13_S_contig8432.19812.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8432.19812.1
Unique Nameprot_Ecto-sp13_S_contig8432.19812.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8432.19812.1 vs. uniprot
Match: D8LCQ8_ECTSI (Gamma carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCQ8_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.870e-94
Identity = 179/209 (85.65%), Postives = 180/209 (86.12%), Query Frame = 0 
Query:    1 VAGPRATIHACTLKDDCMVGAGATVMDXXXXXXXXXXXXXXXXXXXXXVPTGQASAGRPCTPAVYVRDISELEAASIVTTAAETQARRARIQGTAEACFFFYCRQRSALSLAHASECEKGPLEIELDERKWDEKASRDPTYVFQVPEEGDENLAYNDVEGQGVPGRVFNTNLRSPDVEYEPPTYEGDMAAGNDAEEGGKMPHAAAEAKA 209
            V GPRATIHACTLKDDCMVGAGATVMDXXXXXXXXXXXXXXXXXXXXXVPTGQ  AG   TPAVYVRDISELEAASIVTTAAETQ                      ALSLAHASECEKGPLEIELDERKWDEKASRDPTYVFQVPEEGD+NLAYNDVEGQGVPGRVFNTNLRSPDVEYEPPTYEGDMAAGNDAEEGGKMPH AAEAKA
Sbjct:  121 VIGPRATIHACTLKDDCMVGAGATVMDXXXXXXXXXXXXXXXXXXXXXVPTGQLWAG---TPAVYVRDISELEAASIVTTAAETQ----------------------ALSLAHASECEKGPLEIELDERKWDEKASRDPTYVFQVPEEGDDNLAYNDVEGQGVPGRVFNTNLRSPDVEYEPPTYEGDMAAGNDAEEGGKMPHVAAEAKA 304
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8432.19812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCQ8_ECTSI1.870e-9485.65Gamma carbonic anhydrase n=2 Tax=Ectocarpus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 1..98
e-value: 4.1E-17
score: 63.9
NoneNo IPR availablePANTHERPTHR13061:SF11coord: 3..84
NoneNo IPR availablePANTHERPTHR13061DYNACTIN SUBUNIT P25coord: 3..84
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 3..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8432contigEcto-sp13_S_contig8432:74..3213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8432.19812.1mRNA_Ecto-sp13_S_contig8432.19812.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8432 74..3213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8432.19812.1 ID=prot_Ecto-sp13_S_contig8432.19812.1|Name=mRNA_Ecto-sp13_S_contig8432.19812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
VAGPRATIHACTLKDDCMVGAGATVMDGATVSSGAMVAPGATVSPNITVP
TGQASAGRPCTPAVYVRDISELEAASIVTTAAETQARRARIQGTAEACFF
FYCRQRSALSLAHASECEKGPLEIELDERKWDEKASRDPTYVFQVPEEGD
ENLAYNDVEGQGVPGRVFNTNLRSPDVEYEPPTYEGDMAAGNDAEEGGKM
PHAAAEAKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf