mRNA_Ecto-sp13_S_contig8430.19810.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A6H5KBW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW2_9PHAE) HSP 1 Score: 483 bits (1244), Expect = 4.770e-160 Identity = 249/273 (91.21%), Postives = 250/273 (91.58%), Query Frame = 2
Query: 26 MDTLDGAASGFPEGVAEAGAAAGDALGELAEKETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALY-------------------KDLKQQHRRTAQKLGIRHADLKYGIGTWRAAWLTVRHPILFRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESS 787
MD L+GAASGFPEGVAEAG AAGDALGELA KETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALY KDLKQQHRRTAQKLGIRHADLKYGIGTWRAAWLTVRHPIL RRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESS
Sbjct: 1 MDALEGAASGFPEGVAEAGVAAGDALGELAAKETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYARQINRRWDIFEDDEMRRYKDLKQQHRRTAQKLGIRHADLKYGIGTWRAAWLTVRHPILSRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESS 273
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: D7FXU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU3_ECTSI) HSP 1 Score: 462 bits (1189), Expect = 8.620e-152 Identity = 241/278 (86.69%), Postives = 242/278 (87.05%), Query Frame = 2
Query: 11 LAQDEMDTLDGAASGFPEGVAEAGAAAGDALGELAEKETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALY-------------------KDLKQQHRRTAQKLGIRHADLKYGIGTWRAAWLTVRHPILFRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESS 787
LA+DEMDTLD AASGFP G A LA KETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALY KDLKQQHRRTAQKLGIR ADLKYGIGTWRAAWLTVRHPILFRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESS
Sbjct: 4 LAEDEMDTLDHAASGFPAGAAXXXXXXXXXXXXLAGKETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYARQINRRWDIFEDDEMRRYKDLKQQHRRTAQKLGIRQADLKYGIGTWRAAWLTVRHPILFRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESS 281
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A7S1TZ75_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ75_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.730e-32 Identity = 74/242 (30.58%), Postives = 121/242 (50.00%), Query Frame = 2
Query: 104 GELAEKETYGSLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALY---------------------KDLKQQHRRTAQKLGIRHADLKYGIGTWRAAWLTVRHPILFRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGI 766
G+ E E YG ++ + T+ GVL + H ++ E K+ ++++ +YREL ILG+VAF L+ I S V I DKH FE++H+ LFL A+++ + V + +++++ A+++G G W + HP+ + L EHV +H +R FI++N +P NF FA YL KC+Q V+LEL V+ G WV + + L+ +GI
Sbjct: 12 GDAEEVEKYGV--KTKVIGVLTILGVLLIQYGTHSLDKVIEKKKSLREIVNMMYRELMILGIVAFGLFVIESSELVTISDTDKHVFEEVHLTLFLVAVIYGLMIVAVLYFSYAIDNTWKHYEALQNVSGQWQEIRENFDALARQIGAPSGYDARSAGITSHLWRFLAHPVSWMNYKRLLEHVRFHELRQHFIRANHMPGNFAFAGYLKKCKQHVMLELVEVRSGAWVLIAWLLSINLYAEGI 251
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A5A8C6J9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6J9_CAFRO) HSP 1 Score: 93.2 bits (230), Expect = 6.470e-18 Identity = 61/222 (27.48%), Postives = 107/222 (48.20%), Query Frame = 2
Query: 134 SLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYKDLKQQHRRTAQKLGIRH----ADLKYGIGTWRAAWLTVRHPILFR---------RLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVK 760
S+ + I+ I TV +L + + E RH + ++E Y ELA++G+VAF+L+ I+++ I +H FE +HM LFL A++H V + + + RH + K+ + A+ P L R + S L E V +H ++ +F+++N LP +F F +YL K +Q + +L + G+W AL + +L V+
Sbjct: 5 SVNTTEILAIFTVVVILLLQYGLSAIRRLTERHRHLEQMIEHTYAELAVVGIVAFLLFVIDMTTD-GISPTQRHSFETVHMTLFLVAIVHAIVVVTLVFLSMRISKRWERIEAHDFRHWREAKEEKFALSARIAS-----RPCLLRVFCGAADALQYSLLLELVRFHELKWRFLRNNHLPPHFHFTAYLRKAKQHIFRDLGSLPAGLWAALAAILLVDLLVR 220
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A5A8E3X0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3X0_CAFRO) HSP 1 Score: 93.2 bits (230), Expect = 8.820e-18 Identity = 61/222 (27.48%), Postives = 107/222 (48.20%), Query Frame = 2
Query: 134 SLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYKDLKQQHRRTAQKLGIRH----ADLKYGIGTWRAAWLTVRHPILFR---------RLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVK 760
S+ + I+ I TV +L + + E RH + ++E Y ELA++G+VAF+L+ I+++ I +H FE +HM LFL A++H V + + + RH + K+ + A+ P L R + S L E V +H ++ +F+++N LP +F F +YL K +Q + +L + G+W AL + +L V+
Sbjct: 5 SVNTTEILAIFTVVVILLLQYGLSAIRRLTERHRHLEQMIEHTYAELAVVGIVAFLLFVIDMTTD-GISPTQRHSFETVHMTLFLVAIVHAIVVVTLVFLSMRISKRWERIEAHDFRHWREAKEEKFALSARIAS-----RPCLLRVFCGAADALQYSLLLELVRFHELKWRFLRNNHLPPHFHFTAYLRKAKQHIFRDLGSLPAGLWAALAAILLVDLLVR 220
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A5A8EH70_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH70_CAFRO) HSP 1 Score: 93.2 bits (230), Expect = 9.500e-18 Identity = 61/222 (27.48%), Postives = 107/222 (48.20%), Query Frame = 2
Query: 134 SLPSWNIVVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYKDLKQQHRRTAQKLGIRH----ADLKYGIGTWRAAWLTVRHPILFR---------RLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVK 760
S+ + I+ I TV +L + + E RH + ++E Y ELA++G+VAF+L+ I+++ I +H FE +HM LFL A++H V + + + RH + K+ + A+ P L R + S L E V +H ++ +F+++N LP +F F +YL K +Q + +L + G+W AL + +L V+
Sbjct: 5 SVNTTEILAIFTVVVILLLQYGLSAIRRLTERHRHLEQMIEHTYAELAVVGIVAFLLFVIDMTTD-GISPTQRHSFETVHMTLFLVAIVHAIVVVTLVFLSMRISKRWERIEAHDFRHWREAKEEKFALSARIAS-----RPCLLRVFCGAADALQYSLLLELVRFHELKWRFLRNNHLPPHFHFTAYLRKAKQHIFRDLGSLPAGLWAALAAILLVDLLVR 220
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A7S2S7M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7M7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 7.020e-11 Identity = 29/83 (34.94%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 155 VVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLH 403
+ I T+ GV+ + + ++NH+ + + +++L +Y+EL ILG+VAF+L++I + +++ KH FE +HM LFL AL++
Sbjct: 44 IAILTIIGVIIVQFVVDKLNHSIQKHLNGREILNMMYKELMILGIVAFLLFAIEIWGETEVDL--KHEFEMVHMTLFLIALMY 124
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Match: A0A7S3LEW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEW6_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.370e-8 Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query: 116 EKETYGSLPSWNI--VVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTF 409
E++T G +++ V + T+G ++ E++ H ++HAA G+ + +LE +Y ELAILG+V F ++ + D K F +H ALF ALL+ F
Sbjct: 2 EEKTSGFRVDYSVLSVAVMTLGLIMVVEVVLHNLDHAAHGRPYFTAVLENIYSELAILGLVEFCVFLMQ-EYYEDYNKEKKDVFGAVHFALFYTALLNAF 100 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8430.19810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8430.19810.1 >prot_Ecto-sp13_S_contig8430.19810.1 ID=prot_Ecto-sp13_S_contig8430.19810.1|Name=mRNA_Ecto-sp13_S_contig8430.19810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp HVLTCPRRDGHARRRRFWLSRGGRGGWGGGGRCLGRARREGDVRVAAVVEback to top mRNA from alignment at Ecto-sp13_S_contig8430:3326..6874+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8430.19810.1 ID=mRNA_Ecto-sp13_S_contig8430.19810.1|Name=mRNA_Ecto-sp13_S_contig8430.19810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8430:3326..6874+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8430:3326..6874+ >mRNA_Ecto-sp13_S_contig8430.19810.1 ID=mRNA_Ecto-sp13_S_contig8430.19810.1|Name=mRNA_Ecto-sp13_S_contig8430.19810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8430:3326..6874+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |