mRNA_Ecto-sp13_S_contig8429.19806.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8429.19806.1
Unique NamemRNA_Ecto-sp13_S_contig8429.19806.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: D7FZ73_ECTSI (Sno, strawberry notch homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ73_ECTSI)

HSP 1 Score: 696 bits (1797), Expect = 1.670e-251
Identity = 348/366 (95.08%), Postives = 351/366 (95.90%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQLSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTWQLLWQVLNDAVEEDTLYTLVEPASEEEKAEKDHPAAPHVDTSARPPVVRCSFVLGAVCIEHRAHANR 1098
            DVTYESHLPPSSLEQLSEVQMESV+YAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTL SESTSGHGTVARLGQLTRWLGG DAEGCIVFDEAHKA        KNLYLASKPT+TGKKVKEIQD CPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDID RGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYN+AVKTWQLLWQVLNDAV EDTLYTLVEPASEEEKAEKDHPAAPHVDTSARP VVRC FVLGAVCIEHRAHANR
Sbjct:   83 DVTYESHLPPSSLEQLSEVQMESVMYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLVSESTSGHGTVARLGQLTRWLGGRDAEGCIVFDEAHKA--------KNLYLASKPTLTGKKVKEIQDRCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDERGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNAAVKTWQLLWQVLNDAVGEDTLYTLVEPASEEEKAEKDHPAAPHVDTSARPRVVRCRFVLGAVCIEHRAHANR 440          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: UPI000C7F5EC2 (protein strawberry notch homolog 1 n=1 Tax=Otolemur garnettii TaxID=30611 RepID=UPI000C7F5EC2)

HSP 1 Score: 248 bits (632), Expect = 4.370e-74
Identity = 146/306 (47.71%), Postives = 192/306 (62.75%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDD-----NLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++   KR +WFS+S DL +D +RDL+DI  G KN   V++L+   Y       N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN AVK W
Sbjct:   81 DVWYKTSISEETIDNGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKFKYGKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGD-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLW 373          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: UPI0004F04D6A (protein strawberry notch homolog 1 n=1 Tax=Merops nubicus TaxID=57421 RepID=UPI0004F04D6A)

HSP 1 Score: 249 bits (635), Expect = 1.560e-73
Identity = 146/306 (47.71%), Postives = 193/306 (63.07%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDD-----NLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++ G KR +WFS+S DL +D +RDL+DI  G KN   V++L+   Y       N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN +VK W
Sbjct:  272 DVWYQTSISEETIDSGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKFKYGKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLW 564          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: UPI0006B0E3FB (protein strawberry notch homolog 1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0E3FB)

HSP 1 Score: 250 bits (638), Expect = 5.900e-73
Identity = 148/306 (48.37%), Postives = 193/306 (63.07%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDD-----NLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            D++Y+  L    +++  LS +Q+E+++YA QQ  +  L +G RAGF+IGDGAGVGKGR LAGII + ++ G KR IW S+S DL +D++RDL+DI  GK    +VY L+   Y       N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YMTRLG+WG+GT F DF DF+  ++ RGVGAMELVAM++K  GM ++R LSF G  F +  +  ++  I+ Y+ +VK W
Sbjct:  199 DISYKLSLDEEIIDRGLLSALQLEAIVYACQQH-ETFLPDGSRAGFLIGDGAGVGKGRTLAGIIYENYLLGRKRSIWLSVSNDLKYDSERDLQDIGAGKI---EVYPLNKFKYAKISSKVNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLNWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLTVLELQNSLPKARVVYASATGASEPKNMAYMTRLGIWGEGTTFNDFSDFISAVEKRGVGAMELVAMEMKQRGMYIARQLSFAGVSFKVEEIPLAQDFIEVYDRSVKLW 491          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: A0A8B9C2R9_9AVES (Strawberry notch homolog 1 n=2 Tax=Anatidae TaxID=8830 RepID=A0A8B9C2R9_9AVES)

HSP 1 Score: 253 bits (646), Expect = 8.390e-73
Identity = 145/301 (48.17%), Postives = 194/301 (64.45%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++ G KR +WFS+S DL +D +RDL+DI  G KN   V++L+ ++   N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN +VK W
Sbjct:   49 DVWYQTSISEETIDNGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLW 336          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: H0X3F9_OTOGA (AAA_34 domain-containing protein n=1 Tax=Otolemur garnettii TaxID=30611 RepID=H0X3F9_OTOGA)

HSP 1 Score: 248 bits (632), Expect = 9.780e-73
Identity = 146/306 (47.71%), Postives = 192/306 (62.75%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDD-----NLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++   KR +WFS+S DL +D +RDL+DI  G KN   V++L+   Y       N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN AVK W
Sbjct:  238 DVWYKTSISEETIDNGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKFKYGKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGD-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLW 530          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: A0A8C5UCS7_9PASS (Strawberry notch homolog 1 n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UCS7_9PASS)

HSP 1 Score: 253 bits (646), Expect = 1.400e-72
Identity = 145/301 (48.17%), Postives = 194/301 (64.45%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++ G KR +WFS+S DL +D +RDL+DI  G KN   V++L+ ++   N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN +VK W
Sbjct:   28 DVWYQTSISEETIDSGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLW 315          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: A0A8B9GKQ2_9PSIT (Strawberry notch homolog 1 n=1 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9GKQ2_9PSIT)

HSP 1 Score: 253 bits (646), Expect = 1.420e-72
Identity = 145/301 (48.17%), Postives = 194/301 (64.45%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++ G KR +WFS+S DL +D +RDL+DI  G KN   V++L+ ++   N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN +VK W
Sbjct:   38 DVWYQTSISEETIDSGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLW 325          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: A0A8C3Y9K8_CATUS (Strawberry notch homolog 1 n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3Y9K8_CATUS)

HSP 1 Score: 253 bits (646), Expect = 1.450e-72
Identity = 145/301 (48.17%), Postives = 194/301 (64.45%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++ G KR +WFS+S DL +D +RDL+DI  G KN   V++L+ ++   N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN +VK W
Sbjct:   11 DVWYQTSISEETIDSGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLW 298          
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Match: A0A8C3VKM9_CATUS (Strawberry notch homolog 1 n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3VKM9_CATUS)

HSP 1 Score: 253 bits (646), Expect = 1.550e-72
Identity = 145/301 (48.17%), Postives = 194/301 (64.45%), Query Frame = 1
Query:    1 DVTYESHLPPSSLEQ--LSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGAGVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNRPKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTRWLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCCPNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVGAMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTW 897
            DV Y++ +   +++   LS +Q+E++ YA QQ  +  L NG+RAGF+IGDGAGVGKGR +AGII + ++ G KR +WFS+S DL +D +RDL+DI  G KN   V++L+ ++   N SV  GVIF TY SL    ES SG     RL QL  W G  D +G IVFDE HKA+      +      SKPT TG  V E+Q+  P ARVVY SAT  SEP NM YM RLG+WG+GT F +F DF++ ++ RGVGAME+VAM +K  GM ++R LSF G  F +  ++ S+  +  YN +VK W
Sbjct:    6 DVWYQTSISEETIDSGWLSALQLEAITYAAQQH-ETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLRDI--GAKNI-LVHSLNKISSKHNGSVKKGVIFATYSSL--IGESQSGGKYKTRLKQLLHWCGE-DFDGVIVFDECHKAKNLCPVGS------SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLW 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8429.19806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ73_ECTSI1.670e-25195.08Sno, strawberry notch homolog 1 n=1 Tax=Ectocarpus... [more]
UPI000C7F5EC24.370e-7447.71protein strawberry notch homolog 1 n=1 Tax=Otolemu... [more]
UPI0004F04D6A1.560e-7347.71protein strawberry notch homolog 1 n=1 Tax=Merops ... [more]
UPI0006B0E3FB5.900e-7348.37protein strawberry notch homolog 1-like n=1 Tax=Li... [more]
A0A8B9C2R9_9AVES8.390e-7348.17Strawberry notch homolog 1 n=2 Tax=Anatidae TaxID=... [more]
H0X3F9_OTOGA9.780e-7347.71AAA_34 domain-containing protein n=1 Tax=Otolemur ... [more]
A0A8C5UCS7_9PASS1.400e-7248.17Strawberry notch homolog 1 n=1 Tax=Malurus cyaneus... [more]
A0A8B9GKQ2_9PSIT1.420e-7248.17Strawberry notch homolog 1 n=1 Tax=Amazona collari... [more]
A0A8C3Y9K8_CATUS1.450e-7248.17Strawberry notch homolog 1 n=1 Tax=Catharus ustula... [more]
A0A8C3VKM9_CATUS1.550e-7248.17Strawberry notch homolog 1 n=1 Tax=Catharus ustula... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8429contigEcto-sp13_S_contig8429:453..6733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score697.2
Seed ortholog evalue4.1e-198
Seed eggNOG ortholog2880.D7FZ73
Model size1098
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.cellular response to interleukin-11
EggNOG OGsKOG1513@1,KOG1513@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-02_002340.1
Cds size1098
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8429.19806.1prot_Ecto-sp13_S_contig8429.19806.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8429 453..6733 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464112.5165985-CDS-Ecto-sp13_S_contig8429:452..5601681464112.5165985-CDS-Ecto-sp13_S_contig8429:452..560Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 453..560 -
1681464112.5326967-CDS-Ecto-sp13_S_contig8429:646..7721681464112.5326967-CDS-Ecto-sp13_S_contig8429:646..772Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 647..772 -
1681464112.55014-CDS-Ecto-sp13_S_contig8429:1820..19441681464112.55014-CDS-Ecto-sp13_S_contig8429:1820..1944Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 1821..1944 -
1681464112.5616868-CDS-Ecto-sp13_S_contig8429:2667..27361681464112.5616868-CDS-Ecto-sp13_S_contig8429:2667..2736Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 2668..2736 -
1681464112.5739157-CDS-Ecto-sp13_S_contig8429:3082..32251681464112.5739157-CDS-Ecto-sp13_S_contig8429:3082..3225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 3083..3225 -
1681464112.5851827-CDS-Ecto-sp13_S_contig8429:3998..41151681464112.5851827-CDS-Ecto-sp13_S_contig8429:3998..4115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 3999..4115 -
1681464112.5955694-CDS-Ecto-sp13_S_contig8429:4562..47011681464112.5955694-CDS-Ecto-sp13_S_contig8429:4562..4701Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 4563..4701 -
1681464112.606095-CDS-Ecto-sp13_S_contig8429:6220..63651681464112.606095-CDS-Ecto-sp13_S_contig8429:6220..6365Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 6221..6365 -
1681464112.6170516-CDS-Ecto-sp13_S_contig8429:6606..67331681464112.6170516-CDS-Ecto-sp13_S_contig8429:6606..6733Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8429 6607..6733 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8429.19806.1

>prot_Ecto-sp13_S_contig8429.19806.1 ID=prot_Ecto-sp13_S_contig8429.19806.1|Name=mRNA_Ecto-sp13_S_contig8429.19806.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=366bp
DVTYESHLPPSSLEQLSEVQMESVIYAGQQFSKPHLKNGERAGFMIGDGA
GVGKGRQLAGIIMDAWMQGHKRHIWFSISPDLLHDTKRDLKDIKPGKKNR
PKVYNLSDLAYDDNLSVGDGVIFCTYKSLTLFSESTSGHGTVARLGQLTR
WLGGGDAEGCIVFDEAHKARQTATRAAKNLYLASKPTVTGKKVKEIQDCC
PNARVVYCSATPCSEPMNMGYMTRLGLWGDGTRFEDFPDFLKDIDARGVG
AMELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNSAVKTWQ
LLWQVLNDAVEEDTLYTLVEPASEEEKAEKDHPAAPHVDTSARPPVVRCS
FVLGAVCIEHRAHANR
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mRNA from alignment at Ecto-sp13_S_contig8429:453..6733-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8429.19806.1 ID=mRNA_Ecto-sp13_S_contig8429.19806.1|Name=mRNA_Ecto-sp13_S_contig8429.19806.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8429:453..6733- (Ectocarpus species13 EcNAP12_S_4_19m)
GATGTCACGTACGAGTCACACCTCCCGCCGTCCTCCCTGGAGCAGCTGAG CGAAGTCCAGATGGAGAGCGTCATCTATGCCGGGCAGCAGTTCAGCAAGC CTCACCTCAAGAACGGGGAGCGTGCGGGTGAGCGTGGCTGTTGTTGTAGT GGCACGGTTGGTTGTTGCCACCCATATATATCAACACGCGCGCCTGGCTG CAAGGCTGGCGTTGTTTCATCGGTCTGTCGGATAAGACGCACACATGCAA AGGACTACGACAGGCAGCAGCAACGAAAACGACGGCGACAATAACAACGA CAACAACAACAACATCAAATCCACAGCAACACACAACGGCACTATTGACC ACGCGCTCCGCACGACAGGTTTCATGATCGGTGACGGGGCCGGCGTCGGC AAGGGGAGGCAGCTCGCGGGCATCATCATGGACGCGTGGATGCAGGGGCA TAAGCGCCACATCTGGTTCAGCATATCGCCAGACCTGCTCCACGACACCA AAAGAGACTTGAAGTGAGCGATACGCCCAATACACCTATTTCATTATTCT CTACTCCACGACACAAAGAAAGGCTTGAAGTGAGCGAAATGTTCCCCCTA CACCTTCTTCGTTATTTTCTCGTGTTTGTCCTTCTCATTCTTATTTGCCT GATGTGCTCCGTGACACGAATAGAGACCAGAAATGAGGTGTTGATTCCCT GCGCCTCGACCTTTTTCGTTCCCTCCTTGTTTTTTGCCCTCCTTTTTCTG TTGCCTGATTTGCTCCATGACGGGGAGAGAGACTCGAAGTGAGCCAAACG TTCCTCCCACGCCTTTTCCCCTTTTACTTTTCGAGTTTCCTGCTCATTTT TGTCGTCTGGTGTTCTCTCCGACATGAAGAGAGACTTACTGCTCCTCGTC TGGACCGATGAATCTGAACCATTAACCCCCGCAGTCGCATCACCGTGGCT CGCTATGCGCCTGGGGGTATGTATGTATGAGCCACCACGCCCGATGACCC CCCCCCCCCTCCTGACATGGCAGTATCGCATGTGCGGTATGGGAAAGGAG AGGTTTACCGAGAATAGCCTGGGAGGCGAAGTGGGCAAACAAAAAGAGGG GTAGATGACACAGGGAGTGGGTCCAGGTTCTAGGTTACGTGTGGAAAGGG TTCGAAATTGACGAAGGCGATACGCTAGACACGGAGGGTCCAAAAGGGTT AAAGAAGATGTCTGTTGCTTGTGCCGAGAGAGAAGAACAGAATCTAAGAA ATGGAAAAAAGGATGAGGAGGGCGTAGAAGTGTACAGAATGTTGGAAGAA GGAATGGGTTCAAGGAGTACCTACTGCATGGAAATGGTGAAGGACAAAGC TGAAGGTCAAATTCAGGACCGGGAACATTGGCCTCCGAGAACGCAGCCGG ACATACAGGAAGGTGGACGATGAGGACGTCAAGTCCAAATGTGATTGCGG CTCCGAGTGCAAAGACGGTGTTCATGTAGTCGCGGAATGTCGGCTGTACA AGAAGGAGGGGGAAGTGTACATGACGGAGCTGGGAAACGTAGAAGAAATG TACAGGGAGATGTTTGAGGCATGGGATAGCCAGGAGAAGACGTTAGCTGT ACTGGGGCATACGAAGTGGGTTGAAAAGGCGCGAAGTGATATCGGTAGGA TAGAAAGGCCAGGGAAGACAATGTTGAGCCACCTCTCGCAAAGTAGGAAG GAACGATTGGCCGCATATGATCGGTTCTGTGGGAACAATGCCCCGTCCTC TCGAGAACGCGTGGTCAATGGTGTACCCGCTAAGGCATGCCAGACATAAG AGTACGCTCCCCCCCCCCCCTCGTCCTGATTACAACCAGTGGACTGCAAC CAGTTGCTGCTGACGCTGCTCATTTCCCTACCGATTGTGCCGCTCCCTGT GCCGCTGCCTGCGCTGCTGCTTGCGTCGCCAATTTTGCTGATGATTGCGC CACCCCCCCTTGCGCCGTTGCTTGCGCTGGTGATCGTGCCGCTGCCCGCG CCGCTGATTTGTGCTGCCGCGTGCCGCAACAGGGACATCAAGCCCGGTAA GAAGAACAGGCCGAAGGTTTACAACCTCTCGGACCTGGCCTACGACGATA ATCTGTCCGTGGGAGACGGGGTGATCTTTTGCACCTACAAGAGCCTCACC TTGTTCAGCGAAAGCACGTCGGTGCGTGCTTGTGTGTGTTCGTTGTTATT GTCTTTACGCTAGACACCGTTCCGGTCTCTGCTCAGCGCCCCTCATGATA TCCGTTGTTGTTGTAACCACGTTGCGGGTCTCTGCTCAGTGCCCCTTGTA GTATCTATACCGCCGGTCCAACTCACACGCGGACGTCTTCCGTGTTGTCT ACATGTACAGTACCGTGAAGTTGTGTGTTGTATGTTTCTGCAGACCGCGC TACAACGGACGGAACAATGAAAATGACGTCGTCAGCTCTTCGCAACTGGA CGAAAAACGCGAACGCACACGAGTTAAGTCTACGGGGCCCCTCGCACGGA GGGGGGGGGGGGGCGGGGAGGACGTTGGGCGTGTACCTCTAACAATGAGA AGAAAGCACGTTTTGTATCTCGCCGTTCCAACGAAACAATGCGCGCGCTC TCATTTTTGTTGCTGCAGGGCCATGGGACTGTCGCTCGACTCGGCCAGCT CACGCGGTGGCTCGGAGGCGGCGATGCCGAGGGATGCATCGTCTTCGACG AGGCACATAAGGCGAGACAAACTGCTACTAGAGCAGTAACACGCATACAG TAAGCAGTATCGCTGGTGACGTAAGATAGCACACCCCCGTTAGGCAAGCA ACAGCACACATCCCTTGAACCGTGTTTTAAAACTCGATGGTACTCCAAGA AGGAAGTGCTGTAGCATACTGACCGAAAATACCACCCCCCCCTGGGACGA TCCGGTGTGATCGAAGTTCGATTTCTCCTAGAAGACAGGAAGAGCGGGGG TGCCAACATGGTGAAAAAAGGCGTCGAAACCGCCTTGTCGAGACCTTTCC GGAAAAGCATCGGTTGATTTTGTACATCCCCTTCGTCGTGTGGAGTACTC GAGCTGTCGGAAATCAGGCCAGGGAGGGTTATATCTTGTGTCATGTAACG TACGGTTCTCGCACCCACTGCTGTGGGATGCTGCGTTCCGAAGCGTTTCT GAACCCAAGGCACAGCAGCACAGCAAATGACCTTCTGCAGCGGTGTTTTG TCATGGACTTACTTTGCACAAGGCGCAGCACGAAACCGCTTTAGCCTCGT GCCTGGCTCTTACACACCGCTACACCTGGTCTATCTCTCTCTCGTATGCC TCGAAATGAGGATCTTGCTTACGTGAAGTTCTTTGTGTTTGACTGCCGTC GTGGATGATCCTCCGCCCGCCCCGAGGAGGAAGGACCGATCGGCCATCAG TGATTGGTCGATCCTGCGGGAAATATATTCCGTCCTCTCCAGGACGCGTG GTCAATGGTCTACCCGCTAAGGCATGCGAAACATGAGAAGTCCCCCCCCC CCCCACAGGCGAAGAACCTGTACTTGGCCAGTAAGCCCACGGTAACCGGG AAGAAGGTGAAGGAGATACAGGACTGTTGCCCCAACGCGAGGGTGGTGTA CTGCTCGGCGACGCCCTGCTCTGAGCCGATGAACATGGGCTACATGACCA GGTGTTTTGGTTGGTTGGTTGGTTATTGCGGTTGTTATTGTTGTTGTCCT CTTTGGTGCCATTCTTGTTTGTTTGTTTGTGCTCGTCGGTGCCTCTTCCG TTGATCATGTTGTGGTTGGATTGGACATTACGTGGGTGTTGTTGTTGTTC AGCATTTTTTTTTTTTTTTCCGCTTGTCTGGTGTCTTTCCGACCCCCCTC TCCGCGTCACTGCTATGTTTTCTTCTTCCGCACGCACAAACCCTTGCCTT GTTGATTGACTTGGAAGTGTATATGTTGTGCTCTGGGGGTCGACCTCCTC TCTCCTTTTGTCCTCCTTCCGTTTGTTTCTCTCTTTCTCCCTACTAGGCT GGGGCTGTGGGGGGACGGGACGCGATTCGAAGACTTCCCCGACTTCCTGA AGGACATCGACGCCAGGTCAGAACAAGGGGAAACAAACGGGCGAGAGACA ATCGATTCACAACAACGCTGTGGTAGTTTCTTTTCCTTAGCGAGATGTGA TTTCCGGGAAATCGATCCGCTGGGCGGACCCCCGTTCGACGTCGCTGCCT GTTGCGCCACTGTAAGCACATACGGCAGCAGCAACCACGGCAGTACAGGT GTTACTGGAATTAGTTGGGTTTTTTTTTGTCCTTCTTCAGCACGGGACGC CCGCCGTACGGTTGTCGTTGGAGAAAGGGCGACCCGCTAGAAGATGGACC GTTGCAGGTAGGGTAGAGACGAAGAAACGAGGCGTAGCCTCGCGAGATCG AACGATCCGATACCACACGCGGCGGTGGTCGGTGTGTCATATTTCATCTT TACAGGGAGCAACTTGTATTTATGCCTACTACAGGTAGGATTTCTTCCTC GTTGCAGAATACCTACGTAGTGAGGGTGCATGAATAGTATGCTCACTTAC CGTAGCATTGTAACATGGCCTTGGAAGAGAGCAAACCTCAAGCAACGATT TTTGATGAATCCGTGCTCAGATGCTTGAAGAGAGCTTCTTTCTGAATGCA CCGCATTGCTTTTTCCCCGTGCGGGGTATGATGTGCATGCAAGTCGAAAC GGCGAACCAATGCTAGCAAGCTTCATTGCACTCGAACGCTACTGTACCAT CTTCTCATCGCTGCCGGTACCCCCCACGTTCAACAACAGGGGTGTTGGTG CGATGGAGCTTGTTGCGATGCAGCTCAAGGCGGAAGGCATGCTCCTCAGC CGCTCCCTGAGCTTCCAGGGCTGCGAGTTTAGCCTCGTCCCTCTCGTCAA TAGCAAGTTCCAGGTTCGTTTGTTATTGTGTTTTTTTTATGATGATGATG TTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGTTATT GTTGTTGTTGTTGCTGTTGTTGTTGTTATTTTTGTTGTTGCTTTCGCCGC CGAAAGCAAGTCGTTCACTTTTTTTTCTTTCACTCTTTTGTTTTCACGGT TAAGATGAAGGCCAAGTCGTGTGCGAGGTTTGCCGGTGTAGCCCGCCTAA GATTCGTTAGGCTGCATGGCGTCTCCAAAACCGAAAATTCATAATAATTA TATGTAAAATACTCACCAACGATATACCAGTGCACACAGGACAAGCACGC AGAGCGGTTTGGGTTATATTGTAGAATGGCTGATGGATCTATCCATGAAT TCCTGGCAACTTAGACATTTTCATTTTGATTGCACGTTGGAATAATAAAA ATTAAACGAAGGAGGGCAAATGCCGTGACATCATTCATCTTGCACTTGCC ATCCCCAGCACATGCCAAAGATTAAACAACAATAATGAAAATAGAGAGCT GGTGCGTGTCCAGCAATTGTGACCAACTGTGAAAGTACCGACGACCAAAA TAAATGGGACGACAAAAAAACAAGAAAGGTTCGTCGACTACACCAGCAGA GTTACAAGCCAAACCAACACCAACACTTGCAAGCGGAAAAGAGCGAGTAA ACACACACCCCTTTCGTTGTATGTACACGTACTCACTACCCGGTGAAGTC CCGTGGTCCTGGTGTACGCACCCTACAATACACTTCCTGTCCAATTTTTC AGACAAGGTGGTGGTTGGTGGGGTGGCACCGCGTCCGAGTTTTGCGTTCA CCCTGCCCCCCCCTCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCGTCCGCACATCCACCCCACCGACNNNNNNNNNNTACCCTTCTTTTT CAAATTTTGGGAGTTGGGGGGTGTTGGTGGGGGTCGCCGGCTGCCGGCTC TTCGCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGTCGTACGTCAA TACTGGTGTAGATCGATTCCTACAACTCGGCGGTGAAGACGTGGCAGCTT CTCTGGCAAGTTCTCAACGACGCCGTGGAGGAGGACACCCTGTACACCCT CGTCGAACCCGCCAGCGAGGAAGAAAAAGCCGAAAAGGTGCGCACTGGTA GTGGTGGTGGTGGTGCTGCTGCCGTACGTAGGTCTGTCTTGCATCATGTA CAGTGAGAACATACACGCTGCAGGACCATCCTGCTGCGCCGCACGTTGAC ACCTCCGCGAGGCCGCCGGTGGTCCGATGCAGCTTCGTACTTGGAGCAGT GTGTATCGAGCACCGGGCACACGCCAACCGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8429:453..6733-

>mRNA_Ecto-sp13_S_contig8429.19806.1 ID=mRNA_Ecto-sp13_S_contig8429.19806.1|Name=mRNA_Ecto-sp13_S_contig8429.19806.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8429:453..6733- (Ectocarpus species13 EcNAP12_S_4_19m)
GATGTCACGTACGAGTCACACCTCCCGCCGTCCTCCCTGGAGCAGCTGAG
CGAAGTCCAGATGGAGAGCGTCATCTATGCCGGGCAGCAGTTCAGCAAGC
CTCACCTCAAGAACGGGGAGCGTGCGGGTTTCATGATCGGTGACGGGGCC
GGCGTCGGCAAGGGGAGGCAGCTCGCGGGCATCATCATGGACGCGTGGAT
GCAGGGGCATAAGCGCCACATCTGGTTCAGCATATCGCCAGACCTGCTCC
ACGACACCAAAAGAGACTTGAAGGACATCAAGCCCGGTAAGAAGAACAGG
CCGAAGGTTTACAACCTCTCGGACCTGGCCTACGACGATAATCTGTCCGT
GGGAGACGGGGTGATCTTTTGCACCTACAAGAGCCTCACCTTGTTCAGCG
AAAGCACGTCGGGCCATGGGACTGTCGCTCGACTCGGCCAGCTCACGCGG
TGGCTCGGAGGCGGCGATGCCGAGGGATGCATCGTCTTCGACGAGGCACA
TAAGGCGAGACAAACTGCTACTAGAGCAGCGAAGAACCTGTACTTGGCCA
GTAAGCCCACGGTAACCGGGAAGAAGGTGAAGGAGATACAGGACTGTTGC
CCCAACGCGAGGGTGGTGTACTGCTCGGCGACGCCCTGCTCTGAGCCGAT
GAACATGGGCTACATGACCAGGCTGGGGCTGTGGGGGGACGGGACGCGAT
TCGAAGACTTCCCCGACTTCCTGAAGGACATCGACGCCAGGGGTGTTGGT
GCGATGGAGCTTGTTGCGATGCAGCTCAAGGCGGAAGGCATGCTCCTCAG
CCGCTCCCTGAGCTTCCAGGGCTGCGAGTTTAGCCTCGTCCCTCTCGTCA
ATAGCAAGTTCCAGATCGATTCCTACAACTCGGCGGTGAAGACGTGGCAG
CTTCTCTGGCAAGTTCTCAACGACGCCGTGGAGGAGGACACCCTGTACAC
CCTCGTCGAACCCGCCAGCGAGGAAGAAAAAGCCGAAAAGGACCATCCTG
CTGCGCCGCACGTTGACACCTCCGCGAGGCCGCCGGTGGTCCGATGCAGC
TTCGTACTTGGAGCAGTGTGTATCGAGCACCGGGCACACGCCAACCGA
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