prot_Ecto-sp13_S_contig12395.1980.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12395.1980.1
Unique Nameprot_Ecto-sp13_S_contig12395.1980.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A6H5KJ03_9PHAE (Aminotran_1_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJ03_9PHAE)

HSP 1 Score: 453 bits (1166), Expect = 2.260e-156
Identity = 232/246 (94.31%), Postives = 233/246 (94.72%), Query Frame = 0
Query:    1 MRIRSAALMMTSLALLARHVVGFRVSSGVCIRSPSTPSSSRSSVRRMSSTGEMGRSATNPSARGPERERQNAFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYK---DMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            MRIRSAAL MTSLALLARHVVGFRV SGV IRSP+TPSSSRSS RRMSSTGEMGRSATNP   GP RERQ AFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYK   DMHGVD GDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG
Sbjct:    1 MRIRSAALTMTSLALLARHVVGFRVRSGVRIRSPATPSSSRSSARRMSSTGEMGRSATNPPIGGPGRERQTAFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKATTDMHGVD-GDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 245          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A835ZGK3_9STRA (Aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 7.500e-52
Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 0
Query:   70 QNAFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDV-GDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            ++ FDFET  DRS TG+LK D Y GRD+IPLWVADMD KT PAI  A+++    G++GY+ PTEG  +AV  Y + M G+++   K  + F PG +Q+++  C++LP  A VMV TP YPPF  +P+ TGR LV VP  R    WT DW  ME A+ + P+   L+LCNP+NPVG
Sbjct:   77 EDEFDFETLPDRSGTGALKWDKYAGRDIIPLWVADMDFKTCPAIQTALQEYVQDGVYGYTNPTEGATSAVAGYLRGM-GIEITSPKDEIIFLPGAVQTLNIVCRLLPPGAGVMVFTPIYPPFLSAPEYTGRTLVTVPLVRGPEDWTFDWEAMEAAISQKPDIGALLLCNPHNPVG 250          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A2E5JY27_9BACT (Aspartate aminotransferase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E5JY27_9BACT)

HSP 1 Score: 167 bits (424), Expect = 9.830e-46
Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPET-ASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            +DF+TP +R  TGSLK   Y   DV+PLWVADMD K +P I++A++ R  HG+FGY+ P E V+ +V+NY    HG  + D+ W+F++PGT+ +++  C+   E+ +SVM  TP YPPF  +P +  + L+ V   R   RWT D+  ME A++  P+T   +LCNP+NPVG
Sbjct:    3 YDFDTPTNRRKTGSLKWGKYSDGDVLPLWVADMDFKAAPEILEALESRLGHGVFGYTIPREEVEDSVINYMDRHHGYKI-DRRWIFWSPGTVPALNLFCRAFGESDSSVMTATPVYPPFLTAPGHADKNLIQVDLTRNENRWTFDFEAMENALQ--PDTRSFILCNPHNPVG 171          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A355SYE6_9BACT (Aspartate aminotransferase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A355SYE6_9BACT)

HSP 1 Score: 163 bits (413), Expect = 4.380e-44
Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLP-ETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPV 242
            ++F+T  DR+  GSLK D Y GRD++PLWVADMD  T+P I+DA++KR DHGIFGY+ P E    AV+NY +  HG      SWL F PG + +++  C     +T SVM  TP Y PF  +P   GR L+ VP    G  WTLD++ ME A++  P T + +LC+P+NPV
Sbjct:    6 YNFDTCPDRNGYGSLKWDKYKGRDILPLWVADMDFTTAPEILDALQKRLDHGIFGYTIPYEAPIEAVLNYLQRQHGYSA-QASWLNFLPGLVPAINLCCHAFTSKTDSVMTATPVYAPFLTAPDYAGRELIKVPLCLQGETWTLDFDAMEAAIK--PNTKIFVLCSPHNPV 173          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A6N6ZGK8_9BACT (Cystathione beta-lyase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZGK8_9BACT)

HSP 1 Score: 162 bits (410), Expect = 1.290e-43
Identity = 77/172 (44.77%), Postives = 110/172 (63.95%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMH-AACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            FDF++ IDR+NTGSLK D Y  RDV+P WVADMD K+ PA++DA+ +R DHG+FGY+  T+    AV++Y + +HG+   +K WL + PG + +++ +A     E   ++  TP YPPF  +P    R L  V      GR+T DW  +EEA+   P T + +LCNP+NPVG
Sbjct:    3 FDFDSQIDRTNTGSLKWDKYRDRDVLPFWVADMDFKSPPAVLDALHQRVDHGVFGYTLATDEAVEAVLSYLERVHGLQA-EKEWLVWMPGLVPALNVSAAAYTKEGEEILTCTPVYPPFLSAPVWRDRVLKTVDLKIESGRYTFDWEALEEAVT--PSTRVFILCNPHNPVG 171          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: UPI0019AE36FA (Putative C-S lyase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019AE36FA)

HSP 1 Score: 160 bits (405), Expect = 7.150e-43
Identity = 76/173 (43.93%), Postives = 110/173 (63.58%), Query Frame = 0
Query:   72 AFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETA-SVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            +FDF+TP DR  T S K D Y GRD++PLWVADMD ++ PA+I+A+ +R DHG+FGY+ P   +   V+   +  +G  V ++ WL + PG +  ++  C+ + +   +V   TP YPPFF +P+N  R LV VP   AGG W +D   +E A+   P T LL+LC+P+NPVG
Sbjct:    6 SFDFDTPTDRRGTASEKWDRYAGRDILPLWVADMDFRSPPAVIEALHRRVDHGVFGYTAPPHELIATVLEMLQREYGWQVPEE-WLIWLPGLVCGLNVTCRAVGDPGDAVATFTPVYPPFFSAPRNADRELVGVPLLDAGGHWLMDLAALERAIT--PRTRLLLLCSPHNPVG 175          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A1AQI6_PELPD (Aminotransferase, class I and II n=1 Tax=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) TaxID=338966 RepID=A1AQI6_PELPD)

HSP 1 Score: 157 bits (398), Expect = 6.830e-42
Identity = 86/206 (41.75%), Postives = 121/206 (58.74%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYY-KDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETAS-VMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVGE----------PDASKWGNAVIGFTSNEMAIVL 266
            FDF++ +DRSN+GS K D Y GRD+IPLWVADMD ++ PAII A+ +R DHG+FGY+ P +GV  AVM +  +D H     +  W+ + PG +  ++  C+ + E    V+ +TP YPPF  +P  + R LV VP    G RW  D + +E A+   P + LL+LC+P+NPVG            D +K  N VIG       +VL
Sbjct:    6 FDFDSIVDRSNSGSEKWDRYKGRDIIPLWVADMDFRSPPAIIRALHERVDHGLFGYTRPWQGVTDAVMEHLERDFHWRI--EAEWIVWLPGLVCGLNVLCRAVGEIGDDVVTLTPVYPPFLSAPSLSRRNLVTVPLVLRGTRWEADRDELERAIT--PRSRLLLLCSPHNPVGRCWTREELLGFADLAKRHNLVIGSDEIHAGLVL 207          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: B3E8K7_TRIL1 (Aminotransferase class I and II n=1 Tax=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) TaxID=398767 RepID=B3E8K7_TRIL1)

HSP 1 Score: 157 bits (397), Expect = 1.000e-41
Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETA-SVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            FDF+T IDR NTGS K D Y G+D+IPLWVADMD ++ PA+++A+++R +HG+FGYS P E +   V+   +  +G  V  K WL + PG +  ++ +C+ +     +V   TP YPPF  +P   GR L+ VP     GRW +D   +E+A+   P T LL+LC+P+NPVG
Sbjct:    2 FDFDTVIDRRNTGSEKWDRYAGQDIIPLWVADMDFRSPPAVLEALQQRVEHGVFGYSRPPEELVAVVLAMLRQEYGWQVQSK-WLVWLPGLVCGLNVSCRAVGAPGDAVATFTPVYPPFLTAPGLAGRELISVPLVEQQGRWEMDLEVLEQAIT--PRTRLLLLCSPHNPVG 170          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A351HDT6_9BACT (Aspartate aminotransferase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A351HDT6_9BACT)

HSP 1 Score: 157 bits (396), Expect = 1.400e-41
Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETA-SVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGG-RWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 243
            ++F++  +R   GSLK D Y GRD++PLWVADMD +++P IIDA++ R DHG+FGY+ P E    AV+NY +  HG      +WL F PG + +++  C    E   SVM  TP YPPF  +P    R L+ VP    G  +WTLD++ ME A+R  P T L +LC+P+NPVG
Sbjct:    6 YNFDSCPERKGFGSLKWDKYKGRDILPLWVADMDFRSAPEIIDALQARLDHGVFGYTIPHEAPIEAVLNYLEGRHGY-AARAAWLNFLPGLVPAINLCCHAFSEPGDSVMTATPVYPPFLSAPDYAQRELIKVPLCLNGADQWTLDFDAMEAAVR--PNTKLFVLCSPHNPVG 175          
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A2E4IZI8_9BACT (Aspartate aminotransferase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E4IZI8_9BACT)

HSP 1 Score: 156 bits (395), Expect = 1.880e-41
Identity = 76/171 (44.44%), Postives = 106/171 (61.99%), Query Frame = 0
Query:   73 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETAS-VMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPV 242
            FDFETP+ R+ T S K   Y GRDV+P+WVADMD K+SPAI++A+  R +HGIFGYS PT      ++   K+ +   V + SW  + PG +  ++   +   ET   V+ ++P YPPF  +PKN+ R  V VP    G RW +DW+ ME A+ +   T L +LCNP+NPV
Sbjct:    3 FDFETPVQRAGTDSQKWQKYAGRDVLPMWVADMDFKSSPAILEALHARIEHGIFGYSRPTPSTMDTMVRAMKERYDWTV-NPSWFVWLPGLVCGLNVTAQAFAETGDEVLTLSPIYPPFMTAPKNSARISVSVPLVLDGQRWVIDWDAMEAAVTER--TKLFLLCNPHNPV 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ03_9PHAE2.260e-15694.31Aminotran_1_2 domain-containing protein n=2 Tax=Ec... [more]
A0A835ZGK3_9STRA7.500e-5250.29Aminotransferase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A2E5JY27_9BACT9.830e-4644.77Aspartate aminotransferase n=1 Tax=Opitutaceae bac... [more]
A0A355SYE6_9BACT4.380e-4447.37Aspartate aminotransferase n=1 Tax=Opitutae bacter... [more]
A0A6N6ZGK8_9BACT1.290e-4344.77Cystathione beta-lyase n=1 Tax=Puniceicoccaceae ba... [more]
UPI0019AE36FA7.150e-4343.93Putative C-S lyase n=1 Tax=Verrucomicrobia bacteri... [more]
A1AQI6_PELPD6.830e-4241.75Aminotransferase, class I and II n=1 Tax=Pelobacte... [more]
B3E8K7_TRIL11.000e-4144.19Aminotransferase class I and II n=1 Tax=Trichlorob... [more]
A0A351HDT6_9BACT1.400e-4145.66Aspartate aminotransferase n=1 Tax=Opitutae bacter... [more]
A0A2E4IZI8_9BACT1.880e-4144.44Aspartate aminotransferase n=1 Tax=Opitutaceae bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 96..243
e-value: 1.4E-9
score: 37.6
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 99..108
e-value: 2.3E-39
score: 137.4
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 109..243
e-value: 2.3E-39
score: 137.4
NoneNo IPR availablePANTHERPTHR43525:SF1PROTEIN MALYcoord: 73..243
NoneNo IPR availablePANTHERPTHR43525FAMILY NOT NAMEDcoord: 73..243
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.809
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 74..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12395contigEcto-sp13_S_contig12395:483..3165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12395.1980.1mRNA_Ecto-sp13_S_contig12395.1980.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12395 319..3877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12395.1980.1 ID=prot_Ecto-sp13_S_contig12395.1980.1|Name=mRNA_Ecto-sp13_S_contig12395.1980.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MRIRSAALMMTSLALLARHVVGFRVSSGVCIRSPSTPSSSRSSVRRMSST
GEMGRSATNPSARGPERERQNAFDFETPIDRSNTGSLKLDVYGGRDVIPL
WVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVD
VGDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRG
LVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVGEPDASKW
GNAVIGFTSNEMAIVLGGWGGRYGFYVSWFVGRVYRVVVSLLPLLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004839Aminotransferase_I/II
IPR015422PyrdxlP-dep_Trfase_dom1
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase