mRNA_Ecto-sp13_S_contig12395.1980.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A6H5KJ03_9PHAE (Aminotran_1_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJ03_9PHAE) HSP 1 Score: 455 bits (1171), Expect = 1.630e-155 Identity = 232/246 (94.31%), Postives = 233/246 (94.72%), Query Frame = 3
Query: 132 MRIRSAALMMTSLALLARHVVGFRVSSGVCIRSPSTPSSSRSSVRRMSSTGEMGRSATNPSARGPERERQNAFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYK---DMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
MRIRSAAL MTSLALLARHVVGFRV SGV IRSP+TPSSSRSS RRMSSTGEMGRSATNP GP RERQ AFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYK DMHGVD GDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG
Sbjct: 1 MRIRSAALTMTSLALLARHVVGFRVRSGVRIRSPATPSSSRSSARRMSSTGEMGRSATNPPIGGPGRERQTAFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKATTDMHGVD-GDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 245
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A835ZGK3_9STRA (Aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK3_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.270e-50 Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 3
Query: 339 QNAFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDV-GDKSWLFFTPGTIQSMHAACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
++ FDFET DRS TG+LK D Y GRD+IPLWVADMD KT PAI A+++ G++GY+ PTEG +AV Y + M G+++ K + F PG +Q+++ C++LP A VMV TP YPPF +P+ TGR LV VP R WT DW ME A+ + P+ L+LCNP+NPVG
Sbjct: 77 EDEFDFETLPDRSGTGALKWDKYAGRDIIPLWVADMDFKTCPAIQTALQEYVQDGVYGYTNPTEGATSAVAGYLRGM-GIEITSPKDEIIFLPGAVQTLNIVCRLLPPGAGVMVFTPIYPPFLSAPEYTGRTLVTVPLVRGPEDWTFDWEAMEAAISQKPDIGALLLCNPHNPVG 250
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A2E5JY27_9BACT (Aspartate aminotransferase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E5JY27_9BACT) HSP 1 Score: 167 bits (424), Expect = 1.400e-44 Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPET-ASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
+DF+TP +R TGSLK Y DV+PLWVADMD K +P I++A++ R HG+FGY+ P E V+ +V+NY HG + D+ W+F++PGT+ +++ C+ E+ +SVM TP YPPF +P + + L+ V R RWT D+ ME A++ P+T +LCNP+NPVG
Sbjct: 3 YDFDTPTNRRKTGSLKWGKYSDGDVLPLWVADMDFKAAPEILEALESRLGHGVFGYTIPREEVEDSVINYMDRHHGYKI-DRRWIFWSPGTVPALNLFCRAFGESDSSVMTATPVYPPFLTAPGHADKNLIQVDLTRNENRWTFDFEAMENALQ--PDTRSFILCNPHNPVG 171
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A355SYE6_9BACT (Aspartate aminotransferase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A355SYE6_9BACT) HSP 1 Score: 163 bits (413), Expect = 5.980e-43 Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLP-ETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPV 857
++F+T DR+ GSLK D Y GRD++PLWVADMD T+P I+DA++KR DHGIFGY+ P E AV+NY + HG SWL F PG + +++ C +T SVM TP Y PF +P GR L+ VP G WTLD++ ME A++ P T + +LC+P+NPV
Sbjct: 6 YNFDTCPDRNGYGSLKWDKYKGRDILPLWVADMDFTTAPEILDALQKRLDHGIFGYTIPYEAPIEAVLNYLQRQHGYSA-QASWLNFLPGLVPAINLCCHAFTSKTDSVMTATPVYAPFLTAPDYAGRELIKVPLCLQGETWTLDFDAMEAAIK--PNTKIFVLCSPHNPV 173
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A6N6ZGK8_9BACT (Cystathione beta-lyase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZGK8_9BACT) HSP 1 Score: 162 bits (410), Expect = 1.740e-42 Identity = 77/172 (44.77%), Postives = 110/172 (63.95%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMH-AACKMLPETASVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
FDF++ IDR+NTGSLK D Y RDV+P WVADMD K+ PA++DA+ +R DHG+FGY+ T+ AV++Y + +HG+ +K WL + PG + +++ +A E ++ TP YPPF +P R L V GR+T DW +EEA+ P T + +LCNP+NPVG
Sbjct: 3 FDFDSQIDRTNTGSLKWDKYRDRDVLPFWVADMDFKSPPAVLDALHQRVDHGVFGYTLATDEAVEAVLSYLERVHGLQA-EKEWLVWMPGLVPALNVSAAAYTKEGEEILTCTPVYPPFLSAPVWRDRVLKTVDLKIESGRYTFDWEALEEAVT--PSTRVFILCNPHNPVG 171
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: UPI0019AE36FA (Putative C-S lyase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019AE36FA) HSP 1 Score: 160 bits (405), Expect = 9.450e-42 Identity = 76/173 (43.93%), Postives = 110/173 (63.58%), Query Frame = 3
Query: 345 AFDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETA-SVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
+FDF+TP DR T S K D Y GRD++PLWVADMD ++ PA+I+A+ +R DHG+FGY+ P + V+ + +G V ++ WL + PG + ++ C+ + + +V TP YPPFF +P+N R LV VP AGG W +D +E A+ P T LL+LC+P+NPVG
Sbjct: 6 SFDFDTPTDRRGTASEKWDRYAGRDILPLWVADMDFRSPPAVIEALHRRVDHGVFGYTAPPHELIATVLEMLQREYGWQVPEE-WLIWLPGLVCGLNVTCRAVGDPGDAVATFTPVYPPFFSAPRNADRELVGVPLLDAGGHWLMDLAALERAIT--PRTRLLLLCSPHNPVG 175
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A1AQI6_PELPD (Aminotransferase, class I and II n=1 Tax=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) TaxID=338966 RepID=A1AQI6_PELPD) HSP 1 Score: 157 bits (398), Expect = 8.760e-41 Identity = 86/206 (41.75%), Postives = 121/206 (58.74%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYY-KDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETAS-VMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVGE----------PDASKWGNAVIGFTSNEMAIVL 929
FDF++ +DRSN+GS K D Y GRD+IPLWVADMD ++ PAII A+ +R DHG+FGY+ P +GV AVM + +D H + W+ + PG + ++ C+ + E V+ +TP YPPF +P + R LV VP G RW D + +E A+ P + LL+LC+P+NPVG D +K N VIG +VL
Sbjct: 6 FDFDSIVDRSNSGSEKWDRYKGRDIIPLWVADMDFRSPPAIIRALHERVDHGLFGYTRPWQGVTDAVMEHLERDFHWRI--EAEWIVWLPGLVCGLNVLCRAVGEIGDDVVTLTPVYPPFLSAPSLSRRNLVTVPLVLRGTRWEADRDELERAIT--PRSRLLLLCSPHNPVGRCWTREELLGFADLAKRHNLVIGSDEIHAGLVL 207
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: B3E8K7_TRIL1 (Aminotransferase class I and II n=1 Tax=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) TaxID=398767 RepID=B3E8K7_TRIL1) HSP 1 Score: 157 bits (397), Expect = 1.280e-40 Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETA-SVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
FDF+T IDR NTGS K D Y G+D+IPLWVADMD ++ PA+++A+++R +HG+FGYS P E + V+ + +G V K WL + PG + ++ +C+ + +V TP YPPF +P GR L+ VP GRW +D +E+A+ P T LL+LC+P+NPVG
Sbjct: 2 FDFDTVIDRRNTGSEKWDRYAGQDIIPLWVADMDFRSPPAVLEALQQRVEHGVFGYSRPPEELVAVVLAMLRQEYGWQVQSK-WLVWLPGLVCGLNVSCRAVGAPGDAVATFTPVYPPFLTAPGLAGRELISVPLVEQQGRWEMDLEVLEQAIT--PRTRLLLLCSPHNPVG 170
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A351HDT6_9BACT (Aspartate aminotransferase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A351HDT6_9BACT) HSP 1 Score: 157 bits (396), Expect = 1.780e-40 Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETA-SVMVMTPSYPPFFKSPKNTGRGLVLVPADRAGG-RWTLDWNGMEEAMRKHPETALLMLCNPYNPVG 860
++F++ +R GSLK D Y GRD++PLWVADMD +++P IIDA++ R DHG+FGY+ P E AV+NY + HG +WL F PG + +++ C E SVM TP YPPF +P R L+ VP G +WTLD++ ME A+R P T L +LC+P+NPVG
Sbjct: 6 YNFDSCPERKGFGSLKWDKYKGRDILPLWVADMDFRSAPEIIDALQARLDHGVFGYTIPHEAPIEAVLNYLEGRHGY-AARAAWLNFLPGLVPAINLCCHAFSEPGDSVMTATPVYPPFLSAPDYAQRELIKVPLCLNGADQWTLDFDAMEAAVR--PNTKLFVLCSPHNPVG 175
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Match: A0A2E4IZI8_9BACT (Aspartate aminotransferase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E4IZI8_9BACT) HSP 1 Score: 156 bits (395), Expect = 2.380e-40 Identity = 76/171 (44.44%), Postives = 106/171 (61.99%), Query Frame = 3
Query: 348 FDFETPIDRSNTGSLKLDVYGGRDVIPLWVADMDLKTSPAIIDAVKKRADHGIFGYSFPTEGVKTAVMNYYKDMHGVDVGDKSWLFFTPGTIQSMHAACKMLPETAS-VMVMTPSYPPFFKSPKNTGRGLVLVPADRAGGRWTLDWNGMEEAMRKHPETALLMLCNPYNPV 857
FDFETP+ R+ T S K Y GRDV+P+WVADMD K+SPAI++A+ R +HGIFGYS PT ++ K+ + V + SW + PG + ++ + ET V+ ++P YPPF +PKN+ R V VP G RW +DW+ ME A+ + T L +LCNP+NPV
Sbjct: 3 FDFETPVQRAGTDSQKWQKYAGRDVLPMWVADMDFKSSPAILEALHARIEHGIFGYSRPTPSTMDTMVRAMKERYDWTV-NPSWFVWLPGLVCGLNVTAQAFAETGDEVLTLSPIYPPFMTAPKNSARISVSVPLVLDGQRWVIDWDAMEAAVTER--TKLFLLCNPHNPV 170 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12395.1980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12395.1980.1 >prot_Ecto-sp13_S_contig12395.1980.1 ID=prot_Ecto-sp13_S_contig12395.1980.1|Name=mRNA_Ecto-sp13_S_contig12395.1980.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp MRIRSAALMMTSLALLARHVVGFRVSSGVCIRSPSTPSSSRSSVRRMSSTback to top mRNA from alignment at Ecto-sp13_S_contig12395:319..3877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12395.1980.1 ID=mRNA_Ecto-sp13_S_contig12395.1980.1|Name=mRNA_Ecto-sp13_S_contig12395.1980.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3559bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12395:319..3877- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12395:319..3877- >mRNA_Ecto-sp13_S_contig12395.1980.1 ID=mRNA_Ecto-sp13_S_contig12395.1980.1|Name=mRNA_Ecto-sp13_S_contig12395.1980.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=891bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12395:319..3877- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |