prot_Ecto-sp13_S_contig84193.19795.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84193.19795.1
Unique Nameprot_Ecto-sp13_S_contig84193.19795.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length102
Homology
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A6H5KYC8_9PHAE (RNase III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYC8_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.620e-54
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0
Query:    1 LPAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNLV 94
            LP VEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLF SAKGSRRSSGQLSATRQRFVDSHACESFARQLNL+
Sbjct:   14 LPVVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFRSAKGSRRSSGQLSATRQRFVDSHACESFARQLNLL 107          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A835Z0E4_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.250e-23
Identity = 52/93 (55.91%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    1 LPAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            +PA E AL Y F ++ LLL ALTHRS+CNE  TA+GD D LEWLGDSVLQ A+S WL+ S   + RS  +L+  RQ+FVD+ AC  +A +L L
Sbjct:  392 VPAAEAALRYTFSNKLLLLQALTHRSYCNENRTATGDNDALEWLGDSVLQHAISDWLYNSF--AERSVHKLTDLRQQFVDTTACADYASRLGL 482          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A835ZIJ8_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.490e-20
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    1 LPAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNLVR 95
            +PA E ALGY F D+ LLL ALT +S+ NE  +A+GD   +EWLGD VLQ AVS WL+ S   + R  G+++  R+ +VD+ AC  +A+ L L R
Sbjct:   64 VPAAEEALGYEFLDQMLLLQALTLKSYVNEVESATGDNGAMEWLGDCVLQHAVSDWLYTSTAATHRQEGRMTERRKAYVDTTACARYAQCLGLPR 158          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A7G9WDS0_9FIRM (Ribonuclease 3 n=3 Tax=Oscillospiraceae TaxID=216572 RepID=A0A7G9WDS0_9FIRM)

HSP 1 Score: 74.3 bits (181), Expect = 4.840e-14
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    1 LPAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            +  +E  LGY F +++LLL ALTH SF NETH   G  + LE+LGDSVL   V+ +L+ +        G L+ TR   V   AC  F+RQ+N+
Sbjct:    4 MAPLEEKLGYTFQNKQLLLNALTHSSFANETHAPGGSNERLEFLGDSVLGFVVADYLYRNFPDWPE--GHLTKTRAALVCEQACCDFSRQMNV 94          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A2E3LVF3_9BACT (Ribonuclease 3 n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3LVF3_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 1.150e-13
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 0
Query:    4 VEHALGYRFGDRRLLLTALTHRSFCNETH-TASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            +EH + Y F D+ LL  AL HRSF NE   +  G  + LE+LGDSVL L +S +L+ S     R  G LS  R R V++ AC S+ R LN+
Sbjct:   14 LEHRISYTFSDKNLLARALVHRSFANEHQDSVPGHNERLEFLGDSVLGLIISEYLYQSFP--ERPEGDLSTLRSRLVEASACLSYLRSLNI 102          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A859DPW1_9FIRM (Ribonuclease 3 n=2 Tax=Oscillospiraceae TaxID=216572 RepID=A0A859DPW1_9FIRM)

HSP 1 Score: 72.8 bits (177), Expect = 1.860e-13
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    1 LPAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            L  +E  LGY F D++LLL ALTH SF NETH   G  + LE+LGDS+L   V+ +L+ +        G+L+ TR   V   AC  F++++++
Sbjct:    4 LSGLEKNLGYTFQDKQLLLNALTHSSFANETHAPGGSNERLEFLGDSILGFVVADYLYRNFP--EWPEGRLTKTRAALVCEQACCDFSKEMDV 94          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A6M1YXA6_9BACT (Ribonuclease 3 n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1YXA6_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 5.710e-13
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0
Query:    1 LPAVEHALGYRFGDRRLLLTALTHRSFCNETH-TASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            +PA+E  LGY F ++ LL  A THRS+ NE      G  + LE+LGDSVL L +S +L+       +S G LS  R   VD+ AC  + RQL+L
Sbjct:    5 IPAIEKILGYTFLEKELLTLAFTHRSYSNEHRGLVEGHNERLEFLGDSVLGLMISGYLYRHLPA--QSEGHLSHLRASLVDAEACVRYTRQLDL 96          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: RNC_PARUW (Ribonuclease 3 n=8 Tax=Candidatus Protochlamydia TaxID=282132 RepID=RNC_PARUW)

HSP 1 Score: 70.9 bits (172), Expect = 1.210e-12
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    2 PAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            PA+E  LGY F D +LL+ A  HRSF NE    +   + LE+LGDSVL + +S +L+   K  +   GQLS  R R V++ +C  + + L+L
Sbjct:   19 PAIEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLGMLISDYLY--CKLPKTPEGQLSYLRSRLVEASSCVHYIQSLDL 108          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: A0A6G4ZSA5_9BACT (Ribonuclease 3 n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6G4ZSA5_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 5.770e-12
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 0
Query:    4 VEHALGYRFGDRRLLLTALTHRSFCNETHT-ASGDFDELEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            +E  LGY F ++ LLL A THRS+ NE      G  + LE+LGDSVL L VSS+L+       +S G LS  R   V + +C  + RQLNL
Sbjct:    6 IESRLGYVFSNKELLLLAFTHRSYFNENREQVKGHNERLEFLGDSVLGLIVSSYLYTHLP--TQSEGHLSHLRAHLVGAESCVKYMRQLNL 94          
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Match: UPI001F44A265 (ribonuclease III n=2 Tax=Catonella massiliensis TaxID=2799636 RepID=UPI001F44A265)

HSP 1 Score: 68.9 bits (167), Expect = 6.550e-12
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    4 VEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDE-LEWLGDSVLQLAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL 93
            +E  +GY F DR+LL  A +H SF NE H +  D +E +E+LGD+VL+LA S +LF   K  +   G+L+  R R V   A    AR+++L
Sbjct:   13 IEQTIGYEFKDRKLLTNAFSHSSFVNEKHLSKSDCNERMEFLGDAVLELATSEFLFNRHKDMQE--GELTKLRARLVCEQALAYSAREMDL 101          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84193.19795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYC8_9PHAE2.620e-5496.81RNase III domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z0E4_9STRA8.250e-2355.91RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZIJ8_9STRA5.490e-2048.42RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A7G9WDS0_9FIRM4.840e-1443.01Ribonuclease 3 n=3 Tax=Oscillospiraceae TaxID=2165... [more]
A0A2E3LVF3_9BACT1.150e-1345.05Ribonuclease 3 n=1 Tax=Waddliaceae bacterium TaxID... [more]
A0A859DPW1_9FIRM1.860e-1340.86Ribonuclease 3 n=2 Tax=Oscillospiraceae TaxID=2165... [more]
A0A6M1YXA6_9BACT5.710e-1343.62Ribonuclease 3 n=1 Tax=Chlamydiae bacterium TaxID=... [more]
RNC_PARUW1.210e-1241.30Ribonuclease 3 n=8 Tax=Candidatus Protochlamydia T... [more]
A0A6G4ZSA5_9BACT5.770e-1245.05Ribonuclease 3 n=1 Tax=Chlamydiae bacterium TaxID=... [more]
UPI001F44A2656.550e-1241.76ribonuclease III n=2 Tax=Catonella massiliensis Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 1..99
e-value: 2.7E-20
score: 74.5
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 3..95
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 14..94
e-value: 1.9E-13
score: 50.7
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1..93
score: 15.946
NoneNo IPR availablePANTHERPTHR11207:SF0RIBONUCLEASE 3coord: 2..94
NoneNo IPR availablePANTHERPTHR11207RIBONUCLEASE IIIcoord: 2..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84193contigEcto-sp13_S_contig84193:65..370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84193.19795.1mRNA_Ecto-sp13_S_contig84193.19795.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84193 65..370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84193.19795.1 ID=prot_Ecto-sp13_S_contig84193.19795.1|Name=mRNA_Ecto-sp13_S_contig84193.19795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp
LPAVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQ
LAVSSWLFGSAKGSRRSSGQLSATRQRFVDSHACESFARQLNLVREIDVL
L*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036389RNase_III_sf
IPR000999RNase_III_dom