prot_Ecto-sp13_S_contig8415.19790.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8415.19790.1
Unique Nameprot_Ecto-sp13_S_contig8415.19790.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length611
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8415.19790.1 vs. uniprot
Match: D8LS28_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS28_ECTSI)

HSP 1 Score: 832 bits (2150), Expect = 7.630e-294
Identity = 513/605 (84.79%), Postives = 526/605 (86.94%), Query Frame = 0 
Query:    1 MHYMKNAVMTGTRRIARHVPMSMPNPKAXXXXXXXXXXXXKFPTKYNPYKRSSTRRSNNDFSEDAGGSMADVFSGAHLGNGXXXXXXXXXXXXXXXXXXXGEMNGLTWQAHDGIDDSGGVSSSGXXXXXXXXXXXXXXXXXXGARGLSPRRKSYLWKRPTAKPGGDGGXXGVQSYASAGAILRPRPDAETVTVVPQEXXXXXXXXXALLDGRTSVSGHADGGEARRPSAAGTVPGDVPQQGSGAADXXXAATAAAVTGDGDNEGRNGVDLSGRAARSGDAGGGDGGGVELLAGVKDSGDGHRFRVRGASFLADGREVQAEPAVCPLVYTELFTFASADGPHEVPAATVAEEACALRGRVDHIATKGQCASKITELTAGSGGHAGEGHAGGNDDVDEEGGRSRLGPPFLVIFNFQIPGDPPLSLVAAWAVHPEWLGPDSPESLRRFFGVFYRLVDIPLSSPQPSPRETRAGXXXXXXXXXXXXXXXSPAASGSLAPSDSHLWETSDSDRGSSGDELEGVGGGSGXXGLASGGDKDKVGNISTGETTARNPSSGTVKAAADGVPGQGDRRIKLAVSLLDGPQVVAEALPQSGSSLLGHEVGTSDERG 605
            MHYMKNAVMTGTRRIARHVPMSMPNPKA  XXXXX     KFPTKYNPYKRSSTRRSNNDFSEDAGGSMAD+FSGAHLGN XXXXXXXXXXXXXXXXXX  EM+GLTWQAHDGIDDSGGVSSSG  XXXXXXXXXXXXXXXX A GLSPRRKSYLWKRPTAK GG+  XXGVQSY SAGAILRPRPDAETVTV PQE         ALLDGR SVSGHADGGEARR  AAGTVPGDVP Q SGAAD   AAT AAV G  +N GRN VDLSGRAARSGDAGGG GGGVELLAGVKD GDGHRFRVRGASFLADGREVQAEPAVCPLVY ELFTFASAD PHEVPAATVAEEACA  GRVDHIATKG+CASKITELTA SGGHAGEGHAGGNDDVDEEGGRSRLGPPFLVIFNFQIPGDPPLSLVAAWAVHPE LGPDSPESLRRFFGVFYRLVDIPLSSP+PS  ETRAG       XXXXX   SP ASGSL PSDSHLWETSDSDR SSGDELEGVGG SG  GL +GGDK+K+GN+STGET A N  SGTVKAAADGVPGQGD++IKLAVSLLDGPQVVAEALP+SGSSLLGHE      RG
Sbjct:  234 MHYMKNAVMTGTRRIARHVPMSMPNPKAIQXXXXXPKGVPKFPTKYNPYKRSSTRRSNNDFSEDAGGSMADIFSGAHLGNXXXXXXXXXXXXXXXXXXX--EMDGLTWQAHDGIDDSGGVSSSGGAXXXXXXXXXXXXXXXXXASGLSPRRKSYLWKRPTAKTGGNXXXXGVQSYTSAGAILRPRPDAETVTVAPQETGGGGAA--ALLDGRPSVSGHADGGEARR--AAGTVPGDVPHQESGAADAAAAATVAAVAGGLENGGRNRVDLSGRAARSGDAGGGSGGGVELLAGVKDGGDGHRFRVRGASFLADGREVQAEPAVCPLVYAELFTFASADRPHEVPAATVAEEACASSGRVDHIATKGRCASKITELTARSGGHAGEGHAGGNDDVDEEGGRSRLGPPFLVIFNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPRPSSGETRAGGGGAADGXXXXXAVASPTASGSLTPSDSHLWETSDSDRDSSGDELEGVGGRSGGGGLTNGGDKNKIGNVSTGETPAGNQRSGTVKAAADGVPGQGDQQIKLAVSLLDGPQVVAEALPESGSSLLGHEASLRYFRG 832
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8415.19790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS28_ECTSI7.630e-29484.79PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009769Protein ENHANCED DISEASE RESISTANCE 2, C-terminalPFAMPF07059DUF1336coord: 298..430
e-value: 4.5E-5
score: 23.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8415contigEcto-sp13_S_contig8415:305..6150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8415.19790.1mRNA_Ecto-sp13_S_contig8415.19790.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8415 305..6162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8415.19790.1 ID=prot_Ecto-sp13_S_contig8415.19790.1|Name=mRNA_Ecto-sp13_S_contig8415.19790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=611bp
MHYMKNAVMTGTRRIARHVPMSMPNPKAIQRHIPMPKGVPKFPTKYNPYK
RSSTRRSNNDFSEDAGGSMADVFSGAHLGNGSGNGNGGAGSASAGRGGGD
GEMNGLTWQAHDGIDDSGGVSSSGGGGIESSGGGETSSSGGGGARGLSPR
RKSYLWKRPTAKPGGDGGGGGVQSYASAGAILRPRPDAETVTVVPQETAA
AAAAAAALLDGRTSVSGHADGGEARRPSAAGTVPGDVPQQGSGAADAAAA
ATAAAVTGDGDNEGRNGVDLSGRAARSGDAGGGDGGGVELLAGVKDSGDG
HRFRVRGASFLADGREVQAEPAVCPLVYTELFTFASADGPHEVPAATVAE
EACALRGRVDHIATKGQCASKITELTAGSGGHAGEGHAGGNDDVDEEGGR
SRLGPPFLVIFNFQIPGDPPLSLVAAWAVHPEWLGPDSPESLRRFFGVFY
RLVDIPLSSPQPSPRETRAGGGGAADGDGGGAAVASPAASGSLAPSDSHL
WETSDSDRGSSGDELEGVGGGSGGGGLASGGDKDKVGNISTGETTARNPS
SGTVKAAADGVPGQGDRRIKLAVSLLDGPQVVAEALPQSGSSLLGHEVGT
SDERGVLVQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009769EDR2_C