prot_Ecto-sp13_S_contig841.19785.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig841.19785.1
Unique Nameprot_Ecto-sp13_S_contig841.19785.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length535
Homology
BLAST of mRNA_Ecto-sp13_S_contig841.19785.1 vs. uniprot
Match: D8LGU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU3_ECTSI)

HSP 1 Score: 927 bits (2396), Expect = 0.000e+0
Identity = 493/548 (89.96%), Postives = 501/548 (91.42%), Query Frame = 0
Query:    1 MGEISQGVYVTPALNAAACSLLSSYTLISILDHERWMKEWGDEHEAVAVMHLRTPILSAAVAMGIGGITTVHQVALSSLHLDGEIELGANVLCTCLAAVTGITTMFAMLYVARKDTFGGVERVERLKEVILKRHTIAELKLKKGLGKKAAYLGQLQHIVAAGTILAMGILGCWALNVLGLTGKFMVVWRTSGIVMLAFYLLVASIVSCWLLFRVLVWKPSYEYLRPLCSVVFAISVWSVDLF--------------GKTIAITFEYAGDGLGRVGLGWSVGASRDGGEWLMVMMAFGAVITQYAIALELRLAYCGLQDTNLDLQLLAGTSAPEEHIRKTSAIKNNTSKRRHTGQGGRTGNTGSRSPPARSRRRSVVVHASAASSFASPVSSMGSPLSPGSPNSQTMNLTQTFSPGSTCGGDGLAKQAAHLSASAGVVSALFRMGQKSIGLSTKSSQSRSIRVQPAMDCSKVLVYEPSVAEDPEEDNNHPHPLLPSLRHPTHKPPPVASPPGQASASSVEEGRWTRRPTSDGRGSPPPVAVDYSSRSAL 534
            MGEISQGVYVTPALNAAACSLLSSYTLISILDHERWMKEWGDEHEAVAVMHLRTPILSAAVAMGIGGITTVHQVALSSL LDGEIELG NVLCTCLAAVTGITTMFAMLYVARKDTFGGV+RVERLKEVILKRHTIAELKLKKGLGKKAAYLGQLQHIVAAGTILAMGILGCWALNVLGLTG+FMVVWRTSGIV+LAFYLLV SIVSCWLLFRVLVWKPSYEYLRPLCSVVFAIS+WS DL               GKTIAITFEY GDGLGRVGLGWSVGASRDGGEWLM+MMAFGAV+TQYAIALELRLAYCGLQDTNLDLQLLAGT APEEHIRKTSAIKNNTSKRRHTGQGGRTGNTGSRSPPARSRRRSVVVHASAA+SFASP                TMNLT+TFSPGST GGDGLAK  AHLSASAGVVSAL RMGQKSIGL TKSSQSRSIRVQPAMDCSKVLVYEPSVAEDPEEDNNHPHPLLPSLRHPTHKPPPV SPP QASASSVE GRW RRPTSDGRGSPPPVAVDYSS SAL
Sbjct:    1 MGEISQGVYVTPALNAAACSLLSSYTLISILDHERWMKEWGDEHEAVAVMHLRTPILSAAVAMGIGGITTVHQVALSSLRLDGEIELGGNVLCTCLAAVTGITTMFAMLYVARKDTFGGVDRVERLKEVILKRHTIAELKLKKGLGKKAAYLGQLQHIVAAGTILAMGILGCWALNVLGLTGEFMVVWRTSGIVVLAFYLLVTSIVSCWLLFRVLVWKPSYEYLRPLCSVVFAISLWSADLLQRGSIDCHVCVQAVGKTIAITFEYTGDGLGRVGLGWSVGASRDGGEWLMIMMAFGAVMTQYAIALELRLAYCGLQDTNLDLQLLAGTGAPEEHIRKTSAIKNNTSKRRHTGQGGRTGNTGSRSPPARSRRRSVVVHASAAASFASP----------------TMNLTRTFSPGSTGGGDGLAKHPAHLSASAGVVSALLRMGQKSIGLPTKSSQSRSIRVQPAMDCSKVLVYEPSVAEDPEEDNNHPHPLLPSLRHPTHKPPPVESPPRQASASSVEGGRWARRPTSDGRGSPPPVAVDYSSCSAL 532          
BLAST of mRNA_Ecto-sp13_S_contig841.19785.1 vs. uniprot
Match: A0A836CFP1_9STRA (MHYT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP1_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.600e-18
Identity = 83/308 (26.95%), Postives = 141/308 (45.78%), Query Frame = 0
Query:   52 LRTPILSAAVAMGIGGITTVHQVALSSLHLDGEIELGANVLC----------------------TCLAAVTGITTMFAMLYVARKDTFGGVERVERLKEVI--LKRHTIAELKLKKGLGKK-----AAYLGQLQHIVAAGTILAMGILGCWALNVLGLTGKFMVVWRTSGIVMLAFYLLVASIVSCWLLFRVLVWKPSYEYLRPLCSVVFAISVWSVDLFGK----------------TIAITFEYAGDGLGRVGLGWSVGASRDGGEWLMVMMAFGAVITQYAIALELRLAYCGLQDTNLDLQLLAG 314
            L+ P+   A+A+ +G I  +H + +S+ HL+                                 T ++ +     + A L VA  D + G +RVERL +V+  L++ + A LK  K  G++      AYLG+LQH+     + A+G++    L ++ +TG F +VW    +       LV S+   W+LFR+L+WK S  +L+P+C+ V A+ V ++                      +A+ + +A D     G  + V  +   G    V++A  A+  + A+  +LR AY  LQDTNL   L +G
Sbjct:  107 LQRPLEWCALALAVGAIWCMHFLGMSAFHLEMPAAAXXXXXXXXXXXXXXXXXAHEATSFKWGLTAVSMIACALMLRAGLGVAAHDVYAGADRVERLMQVMSELQQRSNASLKDLKSAGQRRRILRVAYLGRLQHVAGGAALTALGVICMHYLGMMAMTGSFHMVWNWWWVAASCVIALVVSLAGFWILFRLLIWKASLTWLKPVCAAVIAVVVCAMRYTAXXXXXXXXXXXXXXXXGALAVHYIHAPDLTPAAG-SFQVTTNVQLGLCTSVLLA--ALAAERAVCQDLRSAYAQLQDTNLYAMLSSG 411          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig841.19785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGU3_ECTSI0.000e+089.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFP1_9STRA2.600e-1826.95MHYT domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 294..534
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 244..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 273..292
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig841contigEcto-sp13_S_contig841:3383..9619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig841.19785.1mRNA_Ecto-sp13_S_contig841.19785.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig841 3383..9619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig841.19785.1 ID=prot_Ecto-sp13_S_contig841.19785.1|Name=mRNA_Ecto-sp13_S_contig841.19785.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=535bp
MGEISQGVYVTPALNAAACSLLSSYTLISILDHERWMKEWGDEHEAVAVM
HLRTPILSAAVAMGIGGITTVHQVALSSLHLDGEIELGANVLCTCLAAVT
GITTMFAMLYVARKDTFGGVERVERLKEVILKRHTIAELKLKKGLGKKAA
YLGQLQHIVAAGTILAMGILGCWALNVLGLTGKFMVVWRTSGIVMLAFYL
LVASIVSCWLLFRVLVWKPSYEYLRPLCSVVFAISVWSVDLFGKTIAITF
EYAGDGLGRVGLGWSVGASRDGGEWLMVMMAFGAVITQYAIALELRLAYC
GLQDTNLDLQLLAGTSAPEEHIRKTSAIKNNTSKRRHTGQGGRTGNTGSR
SPPARSRRRSVVVHASAASSFASPVSSMGSPLSPGSPNSQTMNLTQTFSP
GSTCGGDGLAKQAAHLSASAGVVSALFRMGQKSIGLSTKSSQSRSIRVQP
AMDCSKVLVYEPSVAEDPEEDNNHPHPLLPSLRHPTHKPPPVASPPGQAS
ASSVEEGRWTRRPTSDGRGSPPPVAVDYSSRSAL*
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