mRNA_Ecto-sp13_S_contig8409.19783.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8409.19783.1
Unique NamemRNA_Ecto-sp13_S_contig8409.19783.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 6.740e-162
Identity = 272/339 (80.24%), Postives = 287/339 (84.66%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKDT-------GKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTEEDNVDDGTGTHRSRKRRSGGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEEGATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*CSVRRGQKPSKQARSTAIAESG 998
            CDARP+YGLPGATRAVYCF+HKKGPMVQLFK+T       GKATTG PRSQ  TEPAA            TK   APSN DRN AK+ RRG+Q TEEDN  D +GTHRS+KR SGGKDER AIS+STVAG NLTKT+AKTSA S P PAPAAE NPPS PNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLR+KAELRQQRKQYQAAGLKSGVVLE+F+P ATGTEAAGD IEER+GEVRGE GATT RG NPGWQKVSPE LS PSSKQHGTG+    SV RGQKPSKQARSTA+AESG
Sbjct:   58 CDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPGKATTGKPRSQAPTEPAAAAASVG------TKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRSSGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSPEVLSAPSSKQHGTGQREETSVGRGQKPSKQARSTAVAESG 390          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE)

HSP 1 Score: 467 bits (1201), Expect = 5.880e-151
Identity = 274/344 (79.65%), Postives = 290/344 (84.30%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKDT-------GKATTGIPRSQVSTEPAAXXXXXXXXXXXX-----TKKTPAPSNTDRNGAKRTRRGRQVTEEDNVDDGTGTHRSRKRRSGGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEEGATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*CSVRRGQKPSKQARSTAIAESG 998
            CDARP+YGLPGATRAVYCF+HKKGPMVQLFK+T       GKATTG PRSQV TE + XXXXXXXXXXXX      KK  AP N DRNGAK  RRGRQ TEEDN  DG+GTH+S KR SGGKDER AIS+STV G NLTKT+AK +ASSLP PAPAAEP PPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLR+KAELR QRK+YQAAGLKSGVVLE+F+P ATGTEAAGD IEER+GEVRGE GATTP G NPGWQKVSPE LS  S KQH TG+    SV  GQKPSKQ R T +AESG
Sbjct:  285 CDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSGGKDERGAISSSTVTGENLTKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNPGWQKVSPETLSAASPKQHSTGQRRESSVGTGQKPSKQVRPTTVAESG 628          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 1.740e-139
Identity = 264/340 (77.65%), Postives = 280/340 (82.35%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKD-------TGKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTEEDNVDDGTGTHRSRKRRS-GGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEEGATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*CSVRRGQKPSKQARSTAIAESG 998
            CDARP+YGLPGATRA+YCFAHKK PMVQLFK+        G ATTG  RSQ    PAAXXXXXXXX     K T APSN DRNGAK+ RRG Q TEEDN  D  G H S+KRRS GGKDER  IS++ V G NLTK + KTSASSLP PAPA EPNPPS  NNRLADSSGMAPSVEFLVLRQARE AKTEAEASGLGRRPRAPSRRALEAAGRLKG GAQWMSREKKAEDLR+KAELR QRKQYQAAGLKSGVVLE+F+P ATGTEAAGD IE+R+GEVRGE GATTPRG NPGW KVSPEALS PSSKQHG+G+    SV R QKPSKQARSTA+AESG
Sbjct:  295 CDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAGNATTGK-RSQ---GPAAXXXXXXXXSVGANK-TRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQHGSGQGKGSSVGRRQKPSKQARSTAVAESG 629          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 1.650e-109
Identity = 228/351 (64.96%), Postives = 243/351 (69.23%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKD-------------------TGKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTEEDNVDDGTGTHRSRKRRSGGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEEGATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*CSVRRGQKPSKQARSTAIAESG 998
            C+ARP+YGLPGATRAVYCF+HKKGPMVQLFK+                   T KATTG  RSQ        XXXXXXXX    KKT APS+ DRNG+K+ RRG+Q TEEDN  D +GTHRS+KRRSGGKDER AIS++ V   NLTKT+AKTSA SLP PAPAAE NPPS PNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQY                                                   QKVSPEALS P SKQHGTG+    SV RGQKPSKQARSTA+AESG
Sbjct:   92 CEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGK-RSQ-----GPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVSGTHRSKKRRSGGKDERGAISSAQVTKENLTKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQY---------------------------------------------------QKVSPEALSAPYSKQHGTGQRKETSVGRGQKPSKQARSTAVAESG 385          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.310e-54
Identity = 140/270 (51.85%), Postives = 174/270 (64.44%), Query Frame = 3
Query:  207 APSNTDRNGAKRTRRGRQVTEE-DNVDDGTGTHRSRKRR--SGGKDERDAISTSTVAGVNL-TKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEEG---ATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*CSVRRGQKPSKQARSTAIAES 995
            APSN D+ GA +  +GR+ T++ D+ D G     S+KRR  +GGKD R  +S       +L T  S +T+ SSL  P  AA   P S P NR  D++GMAPSVEF +LRQARE AK EA ASG GRRPRAPSRRALEA+G+LK  GAQWM+RE+KAE+ R KAELR+QR+QY+AAGLKSGVVLE F+  A GT  AGD +    G V GE G   ATT  G +P WQKVSP  L+    ++  T +    S    ++PSK+ R  A   S
Sbjct:   81 APSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGKDNRGEVSKVNATREDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGV---GGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQATEQEETLSPSS-ERPSKRPRPPAAPNS 346          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 2.900e-53
Identity = 134/272 (49.26%), Postives = 169/272 (62.13%), Query Frame = 3
Query:  201 TPAPSNTDRNGAKRTRRGRQVTEEDNVDDGTGTHRSRKRR---SGGKDERDAISTSTVAGVNL-TKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEEG---ATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*CSVRRGQKPSKQARSTAIAES 995
            T APS+ D+ GA    + R+   +    DG   + S K+R   +GGKD R   S       +L T  S +T+ SSLP P  AA   P S P NR  D++GMAPSVEF +LRQARE AK EA  SG GRRPRAPSRRALEA+G+LK  GAQWM+RE+KAE+ R+KAELR+QR+QY+AAG KSGVVLE F+  A GT   GD +    G V G+ G   ATT  G +P WQKVSPE L+  + ++  T +    S    ++PSK+ R  A   S
Sbjct:   29 TRAPSSVDKTGANNAWQSRKAKNDGYSTDGGDKNSSSKKRRGSNGGKDNRGEASKGNATREDLPTTVSVETTVSSLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGV---GGGVAGKIGVGSATTKHGRDPAWQKVSPEMLAASAEQEQATEKEELLSASAEKRPSKRPRPPAAPNS 297          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 3.290e-43
Identity = 123/270 (45.56%), Postives = 155/270 (57.41%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKDTGKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTEED----NVDDGTGTHRSRKRRSGGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEPN---------------PPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFI 755
            C ARP YGLPGA RA YCF+HKKG MV LF +         +      P               K T   +  D+ GAK+ RR   + E++    + DDG   HR  K+    K + +    ++ A V    T+A    S +   +PAA+P+               PP  P +R +D  GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE  RV +ELR++RK+ + AGLK GVVLE F+
Sbjct:  200 CGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKRVTPAAPTEGKRKKQKKGHEERKMTGMTA--DQRGAKKARRESSIKEDNKGATSKDDGG--HRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 6.820e-43
Identity = 132/291 (45.36%), Postives = 162/291 (55.67%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKDTGKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTE--EDNVDDGTGTHRSRK--RRSGGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPA-------------PAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGE 824
            C ARP +GLPGA RAVYCF+HKKG MV LF +         +S  S  P               + T   +  D+ GAK+ RR   + E  +       G HR  K  R +  K  R   ++    G   T  +A TS  S+  PA             PA    PP  P +R +D  GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE  RV +ELR++RK+ + AGLK GVVLE F+P A    A      E +G +RG+
Sbjct:  254 CGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAAPTEGKKKKQTQAKKEREMTGMTA--DQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRAPSRRAL-----EASGRLRGD 535          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 3.240e-41
Identity = 129/270 (47.78%), Postives = 158/270 (58.52%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKDTGKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTEED----NVDDGTGTHRSRKRRSGGKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEP---------------NPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFI 755
            C ARP YGLPGA  AVYCF+HKKG MV LF           +      P      XXXXXXXX K T   +  D+ GAK+ RR   + E++    + DDG   HR  K+  G + + +  + ++   V    T+A    S +    PAA+P                PP  P +R   S GMAPSVE L+LRQARE AKTEAEASG GRR RAPSRRALEA+G+LKG GAQWM+REKKAE  RV  ELR++RK+ + AGLK GVVLE F+
Sbjct:  100 CGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVTPAAPTEGKRKXXXXXXXXRKMTGMTA--DQRGAKKARRESSIKEDNKGATSKDDGG--HRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSR--PSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363          
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.710e-39
Identity = 125/268 (46.64%), Postives = 153/268 (57.09%), Query Frame = 3
Query:    3 CDARPEYGLPGATRAVYCFAHKKGPMVQLFKDTGKATTGIPRSQVSTEPAAXXXXXXXXXXXXTKKTPAPSNTDRNGAKRTRRGRQVTEEDN---VDDGTGTHRSRKRRSG--------GKDERDAISTSTVAGVNLTKTSAKTSASSLPCPAPAAEPNP------PSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQAAGLKSGVVLEIFI 755
            CDARP YGLPGA RAVYCF+HKKG MV LF           +   +  P       XXXXXXX          D+ GAK+ RR   + E++      DG G   ++K R          G  ER   + +T A    ++ S K+SA+  P  +      P      P  P NR   S GM+PSVE L+LRQARE AK EAEASG GRR RAPSRRALEA+GRL+G GAQWM+REK+AE  RV  ELR++RK+ + AGL  GVVLE F+
Sbjct:  200 CDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAVAPTEGKRKKXXXXXXXX--XXXSMTADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNR--PSEGMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8409.19783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G0V0_ECTSI6.740e-16280.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LLY6_9PHAE5.880e-15179.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L360_9PHAE1.740e-13977.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0U7_ECTSI1.650e-10964.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEM4_ECTSI3.310e-5451.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L640_9PHAE2.900e-5349.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYF0_9PHAE3.290e-4345.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLI4_9PHAE6.820e-4345.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH07_ECTSI3.240e-4147.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGW8_ECTSI1.710e-3946.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8409contigEcto-sp13_S_contig8409:497..3472 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2609
Hectar predicted targeting categoryother localisation
Exons2
Cds size855
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464110.9051266-UTR-Ecto-sp13_S_contig8409:496..5731681464110.9051266-UTR-Ecto-sp13_S_contig8409:496..573Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8409 497..573 +
1681464110.934133-UTR-Ecto-sp13_S_contig8409:1795..34721681464110.934133-UTR-Ecto-sp13_S_contig8409:1795..3472Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8409 1796..3472 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464110.9154663-CDS-Ecto-sp13_S_contig8409:573..5991681464110.9154663-CDS-Ecto-sp13_S_contig8409:573..599Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8409 574..599 +
1681464110.9248378-CDS-Ecto-sp13_S_contig8409:966..17951681464110.9248378-CDS-Ecto-sp13_S_contig8409:966..1795Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8409 967..1795 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8409.19783.1prot_Ecto-sp13_S_contig8409.19783.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8409 574..1795 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8409.19783.1

>prot_Ecto-sp13_S_contig8409.19783.1 ID=prot_Ecto-sp13_S_contig8409.19783.1|Name=mRNA_Ecto-sp13_S_contig8409.19783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp
MVQLFKDTGKATTGIPRSQVSTEPAAAAAAAAAAASGGTKKTPAPSNTDR
NGAKRTRRGRQVTEEDNVDDGTGTHRSRKRRSGGKDERDAISTSTVAGVN
LTKTSAKTSASSLPCPAPAAEPNPPSFPNNRLADSSGMAPSVEFLVLRQA
REDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRV
KAELRQQRKQYQAAGLKSGVVLEIFIPTATGTEAAGDAIEERNGEVRGEE
GATTPRGGNPGWQKVSPEALSVPSSKQHGTGETT*
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mRNA from alignment at Ecto-sp13_S_contig8409:497..3472+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8409.19783.1 ID=mRNA_Ecto-sp13_S_contig8409.19783.1|Name=mRNA_Ecto-sp13_S_contig8409.19783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2976bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8409:497..3472+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATGTGACGCTCGGCCCGAGTACGGCCTGCCGGGTGCAACGCGCGCCGTG TACTGCTTCGCCCATAAGAAGGGCCCAATGGTGCAACTCTTCAAGGACAC TGGGTAAGCTGAGTGCGCTGTTGCCCCAAGTGTCACATGGTTGGTGTTGT TTTAGTGTTTTGGAACCAAGCAGCTGAGTGTCAGTAGACTACGCGGTACC TCAAACCTATCGCGAAACAGTAGTTTACAACTGTCGTACGGCGGAGGATC CGAATATAGAGGAAATACGGTCGATGCAGCCGTGAAATACGGTCGATGCA GCCGTTTCTTCCTAGTTTCCTGTTTCCTTCCAGGCCGCAGATAAGCAACG AAGTGCTGTTCCGTTTCGCCTGTCGGCATCCCAGAAACATGTTACCGAGG TCGTTTTTTTGAGAACATTGACAGATACGTGTGACACCCTACCGTTGCCT GTTGCGTCACATCGCTGCAGGAAGGCAACCACGGGCATACCTCGCAGCCA GGTTTCTACTGAACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCAT CAGGTGGAACAAAGAAAACCCCAGCGCCGAGTAACACAGATCGCAACGGG GCTAAGAGAACGCGGCGAGGGCGACAGGTGACGGAGGAAGACAATGTCGA CGATGGCACAGGCACGCACAGAAGCAGAAAGAGGCGTTCGGGCGGAAAGG ACGAACGGGACGCGATTTCCACCTCCACGGTGGCTGGGGTAAACCTGACG AAAACGTCCGCTAAGACTTCTGCATCGTCCCTCCCATGTCCAGCTCCCGC CGCCGAACCCAACCCCCCCTCTTTTCCCAACAACCGGCTGGCCGACTCGT CGGGGATGGCCCCATCCGTAGAGTTTCTCGTACTTAGGCAGGCGAGGGAG GATGCCAAGACGGAGGCCGAGGCCAGCGGCCTGGGTAGAAGGCCCCGCGC GCCGTCACGGCGGGCCCTGGAGGCGGCGGGCCGGTTGAAGGGCACCGGTG CACAATGGATGAGTCGCGAAAAAAAGGCGGAGGATCTGAGAGTCAAGGCG GAGCTGAGGCAGCAGCGGAAGCAGTACCAGGCGGCAGGCCTGAAGTCTGG GGTTGTGCTAGAGATTTTCATACCGACGGCGACCGGGACCGAGGCAGCGG GTGATGCGATCGAGGAGAGGAATGGGGAGGTAAGAGGAGAGGAGGGAGCA ACGACGCCTAGAGGTGGTAACCCCGGATGGCAGAAGGTATCGCCAGAAGC TCTCTCAGTGCCTTCTTCAAAGCAGCACGGTACGGGAGAGACGACATAAT GTTCCGTAAGACGAGGGCAGAAGCCTTCGAAGCAAGCCAGGTCCACCGCT ATAGCGGAGAGCGGTTAGCCCCAAGGCCTTCACCGTGGTGTACGGTATGG GATGGGTATTGGACTCTGCGTCGACCGACGGCGTGGCGTCATGCGGTTGC TGCTGCTACCGCCGCCGAAGCCATCCGGAATCTAGCCGCTAGGAGCGCTG CGAGACATCCAGGATATGAAGAGCAGCTACTGATCTCCGAGCAATACTCG AGAACGTACGTTTTATCAGTTGTAGGGAGAAGGGGAACAGGGAGACAGAC CAAGAGCGACATAAAAGGGACACCGAGGTGCTGCCTACACGTGGCATGTG CCGAGAAAGCACTAGACAATAACATTTTATTTTTGGGTTGTTTTGCGTTT GTCTGCACACAAGGGCACGCACATCGACGAAGGTCGTATACTTGTCCCCG TTGAATTTCGTCACTGGGGGTGCTCTGGCAGGGTAGGGTATGACGGATGA CGTGAGGGTTCAGGGCGTATAGGTTGTACATGAAGGCTTTTCCTGCCTGG AGGATTGTTTCAGTAGTCGCAAACGTGCGGTGAGGTCTCATGGCTAGCGT CCGGCGGTTGGAACGATTGTCAGGAGCGCTATCTTGACGGAAAGAACAGA GTTTCATGCTGTATGTCTTCAACGGTAGTTGCTCGAATTGGAATCGTAGG GCGTGTTTCGAAGCGGCCGTGTTGTGGTACGAGCTACAGCTTGTAAGGAA GAGCAGGTACATACGTATTTGTGTATCCCTTCACGAAGCGTTTGTCGATT GGAGGTAGTAGATAGCTCCGGTCAAGTTCCGCGTCGTACGTACGTAGTTG CGGTCACGCTGCTTGGTGACGCCAGACTTGTGATCGTAGAAATTATGTGC TGCGCATTTACCAAAGGACAACAATGTTGGGGCCCGGCTTTATTCGAGAC TCTTTTCTGATTATCCATGTCGGGATATGAAATGAACGTACATATCAATA TGCATTCGTGAGCCTTGATGAGGGGGTTTGTCGTGTACTCCCTACACGTG GCATGCGCCGAGCAAGTACTAATATGTTATTTTTGGGGTTGTTGTGCCTT CGTCTGCACACAGGGGCACGCACATCGACGAAGACCGTAGATGTGCCCCC GTTGAAGTGCGTTGCTGGGCGCGCTCTGGTAGGGTAGGGTATATGACGGA TGACGTGAGGGTTCAGGGCATAGATTTTGCATGTGAAGGCTTTTTCTGCC TGGAGGATTGTTTTCGTAGTCGCAAACGTGTGGAAAGGTCTCATGGCTAG CGTACGGCGGTTGGAACGGTTTGTCAGGAGCGCTATCTTGGCCGAAAGAA CAGAGCTGCATGCTGTATGTCTTCAACGGTAGTTGCTCGAATTGGAATCG TAGGGCGTGTTTCGAAGCGGTCGTGATGTGGCACGGGCTATAGCTTGTAA GGAAGAAACAGGAGTGTTTGTGTAGATATTCACGAAATGTTTGCCGCTTA GAGATACTAGAGAGTTCCGGTCAAATTCAGCGTCGTACATACGTAGTTGC GGTCACGCTGCTTGGTGACGCCAGGCTTGCGCATCTGCCGAATGACGACA TAGGTTGGGGGAACAATTTTGGCCTATGCGGATTTCTGGATATTCATGTG TAAATTGCAGGATACGAACTGAAGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8409:497..3472+

>mRNA_Ecto-sp13_S_contig8409.19783.1 ID=mRNA_Ecto-sp13_S_contig8409.19783.1|Name=mRNA_Ecto-sp13_S_contig8409.19783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=855bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8409:497..3472+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGCAACTCTTCAAGGACACTGGGAAGGCAACCACGGGCATACCTCG
CAGCCAGGTTTCTACTGAACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CTGCATCAGGTGGAACAAAGAAAACCCCAGCGCCGAGTAACACAGATCGC
AACGGGGCTAAGAGAACGCGGCGAGGGCGACAGGTGACGGAGGAAGACAA
TGTCGACGATGGCACAGGCACGCACAGAAGCAGAAAGAGGCGTTCGGGCG
GAAAGGACGAACGGGACGCGATTTCCACCTCCACGGTGGCTGGGGTAAAC
CTGACGAAAACGTCCGCTAAGACTTCTGCATCGTCCCTCCCATGTCCAGC
TCCCGCCGCCGAACCCAACCCCCCCTCTTTTCCCAACAACCGGCTGGCCG
ACTCGTCGGGGATGGCCCCATCCGTAGAGTTTCTCGTACTTAGGCAGGCG
AGGGAGGATGCCAAGACGGAGGCCGAGGCCAGCGGCCTGGGTAGAAGGCC
CCGCGCGCCGTCACGGCGGGCCCTGGAGGCGGCGGGCCGGTTGAAGGGCA
CCGGTGCACAATGGATGAGTCGCGAAAAAAAGGCGGAGGATCTGAGAGTC
AAGGCGGAGCTGAGGCAGCAGCGGAAGCAGTACCAGGCGGCAGGCCTGAA
GTCTGGGGTTGTGCTAGAGATTTTCATACCGACGGCGACCGGGACCGAGG
CAGCGGGTGATGCGATCGAGGAGAGGAATGGGGAGGTAAGAGGAGAGGAG
GGAGCAACGACGCCTAGAGGTGGTAACCCCGGATGGCAGAAGGTATCGCC
AGAAGCTCTCTCAGTGCCTTCTTCAAAGCAGCACGGTACGGGAGAGACGA
CATAA
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