prot_Ecto-sp13_S_contig84038.19780.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84038.19780.1
Unique Nameprot_Ecto-sp13_S_contig84038.19780.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig84038.19780.1 vs. uniprot
Match: D7FUW9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUW9_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 6.810e-39
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0 
Query:   11 ACKCGNNEAVMAFLSSCSIDLEHKSATGKTPLLEVCWEGHKRTAELLIREGADVHAKDDADFCCLHAATYQ 81
            A KCGNN AV+AFLSSCSIDLEHKSATGKTPL+EVCWEGHKRTAELLIREGADVHAKDDADFCCLHAATYQ
Sbjct:  107 ASKCGNNGAVVAFLSSCSIDLEHKSATGKTPLVEVCWEGHKRTAELLIREGADVHAKDDADFCCLHAATYQ 177
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BLAST of mRNA_Ecto-sp13_S_contig84038.19780.1 vs. uniprot
Match: UPI00201EAC5A (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EAC5A)

HSP 1 Score: 57.4 bits (137), Expect = 1.800e-7
Identity = 27/78 (34.62%), Postives = 46/78 (58.97%), Query Frame = 0 
Query:    2 DNHQELFYAACKCGNNEAVMAFLSSCSIDLEHKSATGKTPLLEVCWEGHKRTAELLIREGADVHAKDDADFCCLHAAT 79
            D++  + + AC  G+ E V   LS  ++D+  K   G+TP++    +GH++T +LL+++GADV   DD     LH A+
Sbjct:  295 DSNDTILHVACFGGHVEMVQYLLSKVTVDINCKGNYGRTPVMVAAEKGHRKTFDLLVKQGADVSLVDDNGHNILHLAS 372
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84038.19780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUW9_ECTSI6.810e-3994.37Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
UPI00201EAC5A1.800e-734.62ankyrin repeat domain-containing protein 50-like n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 3..33
e-value: 1000.0
score: 5.0
coord: 70..99
e-value: 0.74
score: 18.8
coord: 37..66
e-value: 0.01
score: 25.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 75..99
score: 11.033
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 11.354
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 4..68
e-value: 3.7E-8
score: 33.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 3..99
score: 22.994
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..99
e-value: 9.4E-24
score: 85.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..98
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 4..99
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 4..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84038contigEcto-sp13_S_contig84038:72..368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84038.19780.1mRNA_Ecto-sp13_S_contig84038.19780.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84038 72..368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84038.19780.1 ID=prot_Ecto-sp13_S_contig84038.19780.1|Name=mRNA_Ecto-sp13_S_contig84038.19780.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
MDNHQELFYAACKCGNNEAVMAFLSSCSIDLEHKSATGKTPLLEVCWEGH
KRTAELLIREGADVHAKDDADFCCLHAATYQGHLALVDLLLDNGADIEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf