prot_Ecto-sp13_S_contig8400.19777.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8400.19777.1
Unique Nameprot_Ecto-sp13_S_contig8400.19777.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1358
Homology
BLAST of mRNA_Ecto-sp13_S_contig8400.19777.1 vs. uniprot
Match: D7FYZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ9_ECTSI)

HSP 1 Score: 1881 bits (4872), Expect = 0.000e+0
Identity = 1155/1352 (85.43%), Postives = 1176/1352 (86.98%), Query Frame = 0
Query:    1 MLLARVGSGMTSNQRRSGASLAEARGGAPHLPEPPTAVIQALNKQVAPERFTEGDARAVRTLAPAIAAGSRLIVSLLNFSGRGGGANPAREHASP-FCCPPATEPSSRGCPEELLLLRDGLRRAREGLGADRARLFVLDADLAPGVTTGAGGRLRLQLWHEDPAPPWSVGTSGALGRSGGGGGRGVRLDAGLHGVALSTGRAARSADALSDPLHDREPDVREGFLARSVLCAPLLERQPXXXXXXXXXXXXETDRGST-TRRGGIASGVPFAVLELTLGRRSVPVDDDGRASEASIARGSGLGESGG-RTRKAFTEGDEALAEAFAHDLAGLLSGLLAAGFRPRASATTLAGGGGHLGTAHGVGRSRGSARDGRASWQQRRAIPSVDGACDDDDRGRLLTRADLGRPTQQQNGHGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRASVATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHGLVVSDEQRRGTASAGVANVEPGGRQQQVEAIEARSWATAQRVLEHCKESLAADKRPRQHHFPDGSANPAVATASSTSSSHATSITPAVRSLVSTLLPGCTAVLLLLDRATGRLRDVGFETDHPDEGGADLATPQQPPPVQREDVARRALASGKALLSRMADPGEAAATPEGGGGSSDLSRRRIFCVPVCGTAERPYGVLQLFLPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAKVVTDSVGLALGWCEALDRQEKASQEQAXXXXXXXXXXXXXXERSREELEARHKEELRLARQSHAARAAETADAHARAVASLLEDREELAAAXXXXXXLARARKDGARALVAWREASRRGRKAEAIAARLLERRRGKALREWRSRTLALRARDGAEAAGIGASARRGLRRAIGTWTRNVARRRVAEERRLAGARLVAEVLRRSGGAVRRCFGVWRVAARDASAAQEALAQKEEDEKRTAFVDEASFHCGGELSRAEARAQLLSERVADMCRRRRNDRVVRSACRAWLDLAQQMGQMRENVRLAELWRRRQGLKSALTRWREVIVPQPRTIPPALTAEEGPPTTGTGPPAVDLAESETWMERVGPWGLIGENPAAAAVAGEARGGRSVPPPAGIGGGQAPTRSGKRVLVSGGRE-VVEAAVAHSPIRANALACGTGGGSSVRSSSRADRAAASPRAAENTAFRDNNATWDGSLERLRLETLTVAAAGGFRQQRNRTSALRLLSAWRRAAATERSKREALSRLVRGARRRRLRGGLGRWRAGTRAVRAKEERRAAREGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLATEREKELRLEKAAGEGL 1348
            MLLARVGSGMTSNQRRSGASLAEA GG PHLPEPPTAVIQALNKQVAPERFTEGDARAVRTLAPAIAAGSRLIVSLLN SGR GGANPAREHASP F CPPATEPSSRGCPEELLLLRDGLRRAREGLGADRARLFVLD DLAPGV  G GGRLRLQLWHEDPA PWSVG SGALG+SGGGG  GVRLDAGLHGVA+STGRAARSADALSDPL+DREPDVREGFLARSVLCAPLLERQPXXXXXXXXXXXXETDRGST +  GGIASGVPFAVLELTLGRRSVPVDDDGRA+EASIARGSGLGESGG RTRKAF EGDEALAEAFA DLAGLLSGLLAAGFRPR SATTLAGGGGHLGTA GV  SRGSARDGRASWQQRRAIPSVD ACDD DRGRLLTRADL RPTQQ N HGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRASVATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHG VVS+EQRRG AS         GRQQQVEAIEARSWATAQRVLEHCKESLAADKRPRQHH PDGSAN AVA ASSTS+SHA SI PAVRSLVSTLLPGCTAVLLLLDRATGRLRD GFETDHPDEGGAD ATPQQPP VQREDVARRALASGKALLSRMADPGEAAA PEGGGGSSDLSRRRIFCVPV                                                                 VTDSVGLALGWCEALDRQEKASQEQA XXXXXXXXXXXXX    EELEARHKEELRLARQSH ARAAETADAHARAVASLLED+EELAA XXXXXX  RARKDGARALVAWREASRRGRKAEAIAARLLERRRGKALREWRSRTLALRARDGAEAAG+ ASARRGLRRA+GTWT+NVARRRVAEERRLAGARLVAEVLRRSGG V+ CF VWRVAARDASAAQ+ALAQ E DEKR A VDE       ELSRAEARAQLLSERVADMCRRRRNDRVVRSACRAWL LAQQMGQ RENVRLAELWRRRQ LKSALTRWR VIVPQ ++IPPALTAEEGPP TGTGPPAV L ESET +ERVGPWG IGE P AAAVAGEA GGR VPPPAG  GGQA TR G+R+LVSGGRE VV+AAVAHSPIR +ALA GTGGGSSVRSSS ADRAAASPRAAE TAFRDNNAT DG LERLRLETLT AAAGGFRQQR+RTSALRLLSAWRRAAATERSKREALSRLVRGARRRRLRGGL RWR G RAVRAKEERRAAREGAAAXXXXXXXXXXXXXXXXXXXXXX        KLATEREKELRLEKAAGE L
Sbjct:   78 MLLARVGSGMTSNQRRSGASLAEAGGGHPHLPEPPTAVIQALNKQVAPERFTEGDARAVRTLAPAIAAGSRLIVSLLNLSGRAGGANPAREHASPKFDCPPATEPSSRGCPEELLLLRDGLRRAREGLGADRARLFVLDTDLAPGVAVGGGGRLRLQLWHEDPARPWSVGMSGALGQSGGGGWGGVRLDAGLHGVAVSTGRAARSADALSDPLYDREPDVREGFLARSVLCAPLLERQPXXXXXXXXXXXXETDRGSTASSSGGIASGVPFAVLELTLGRRSVPVDDDGRATEASIARGSGLGESGGGRTRKAFAEGDEALAEAFARDLAGLLSGLLAAGFRPRESATTLAGGGGHLGTARGV--SRGSARDGRASWQQRRAIPSVDDACDDHDRGRLLTRADLRRPTQQDNDHGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRASVATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHGRVVSEEQRRGAASL--------GRQQQVEAIEARSWATAQRVLEHCKESLAADKRPRQHHHPDGSANLAVAAASSTSNSHAASIAPAVRSLVSTLLPGCTAVLLLLDRATGRLRDAGFETDHPDEGGADRATPQQPP-VQREDVARRALASGKALLSRMADPGEAAAAPEGGGGSSDLSRRRIFCVPV-----------------------------------------------------------------VTDSVGLALGWCEALDRQEKASQEQAAXXXXXXXXXXXXXXXXXEELEARHKEELRLARQSHGARAAETADAHARAVASLLEDKEELAAXXXXXXXXXRARKDGARALVAWREASRRGRKAEAIAARLLERRRGKALREWRSRTLALRARDGAEAAGVEASARRGLRRAVGTWTKNVARRRVAEERRLAGARLVAEVLRRSGGPVKICFCVWRVAARDASAAQKALAQNEADEKRRAVVDE-------ELSRAEARAQLLSERVADMCRRRRNDRVVRSACRAWLGLAQQMGQRRENVRLAELWRRRQALKSALTRWRGVIVPQAQSIPPALTAEEGPPATGTGPPAVGLTESETRVERVGPWGSIGETPVAAAVAGEAGGGRGVPPPAGSRGGQASTRGGERLLVSGGREGVVQAAVAHSPIRTDALASGTGGGSSVRSSSVADRAAASPRAAEITAFRDNNATGDGGLERLRLETLTEAAAGGFRQQRDRTSALRLLSAWRRAAATERSKREALSRLVRGARRRRLRGGLSRWRVGARAVRAKEERRAAREGAAAXXXXXXXXXXXXXXXXXXXXXXARGRAAAEKLATEREKELRLEKAAGEEL 1346          
BLAST of mRNA_Ecto-sp13_S_contig8400.19777.1 vs. uniprot
Match: A0A6H5K3T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T9_9PHAE)

HSP 1 Score: 1804 bits (4672), Expect = 0.000e+0
Identity = 1156/1349 (85.69%), Postives = 1184/1349 (87.77%), Query Frame = 0
Query:   39 IQALNKQVAPERFTEGDARAVRTLAPAIAAGSRLIVSLLNFSGRGGGANPAREHASPFCCPP----ATEPSSRGCPEELLLLRDGLRRAREGLGADRARLFVLDADLAPGVTTGAGGRLRLQLWHEDPAPPWSVGTSGALGRSGGGGGR-GVRLDAGLHGVALSTGRAARSADALSDPLHDREPDVREGFLARSVLCAPLLERQPXXXXXXXXXXXXETDRGSTTRRGGIASGVPFAVLELTLGRRSVPVDDDGRASEASIARGSGLGESGG-RTRKAFTEGDEALAEAFAHDLAGLLSGLLAAGFRPRASATTLAGGGGHLGTAHGVGRSRGSARDGRASWQQRRAIPSVDGACDDDDRGRLLTRADLGRPTQQQNGHGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRASVATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHGLVVSDEQRRGTASAGVANVEPGGRQQQVEAIEARSWATAQRVLEHCKESLAADKRPRQHHFPDGSANPAVATASSTSSSHATSITPAVRSLVSTLLPGCTAVLLLLDRATGRLRDVGFETDHPDEGGADLATPQQPPPVQREDVARRALASGKALLSRMADPGEAAATPEGGGGSSDLSRRRIFCVPVCGTAERPYGVLQLFLPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAKVVTDSVGLALGWCEALDRQEKASQEQAXXXXXXXXXXXXXX----ERSREELEARHKEELRLARQSHAARAAETADAHARAVASLLEDREELAAAXXXXXXLARARKDGARALVAWREASRRGRKAEAIAARLLERRRGKALREWRSRTLALRARDGAEAAGIGASARRGLRRAIGTWTRNVARRRVAEERRLAGARLVAEVLRRSGGAVRRCFGVWRVAARDASAAQEALAQKEEDEKRTAFVDEASFHCGG-----------ELSRAEARAQLLSERVADMCRRRRNDRVVRSACRAWLDLAQQMGQMRENVRLAELWRRRQGLKSALTRW-------REVIVPQPRTIPPALTAEEGPPTTGTGPPAVDLAESETWMERVGPWGLIGENPAAAAVAGEARGGRSVPPPAGIGGGQAPTRSGKRVLVSGGRE-VVEAAVAHSPIRANALACGTGGGSSVRSSSRADRAAASPRAAENTAFRDNNATWDGSLERLRLETLTVAAAGGFRQQRNRTSALRLLSAWRRAAATERSKREALSRLVRGARRRRLRGGLGRWRAGTRAVRAKEERRAAREGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLATEREKELRLEKAAGEGLREAVERLQKE 1358
            + ALNKQVAPERFTEGDARAVRTLAPAIAAG               G                   ATEPSSRGCPEELLLLRDGLRRAREGLGADRARL VLDADLAPGV TG GGRLRLQLWHEDPAPPWSVGTSGALGRSG      GVRLDAGLHGVALSTGRA RSADALSDPL+DREPDVREGFLARSVLCAPLLERQPXXXXXXXXXXXX TDR ST  RGGIASGVP AVLELTLGRRSVPVDDDGRA+EASIARGSGLGESGG RTRKAF EGDEALAEAFA DLAGLLSGLLAAGFRPRA+ATTLAGGGGHLGTA G GRSRGSARDGRASWQQRRAIPSVDGAC+DD RGRLLTRADLGRPTQQQNGHGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRASVATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHG VV+DEQRRGTA  GVANVEPGGRQQQVEAIEARSWATAQRVLEHCKESLAADK+PRQHH PDGSANPAVATASSTSSSHA SITPAVRSLVSTLLPGCTAVLLLLDRATGRLRD GFETDHPD GGADLATPQQPPPVQRED+ARRAL SGKALLSRMADPGEAAA PEG   SSDLSRRRIFCVPVCG+AER YGVLQLFLP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAKVVTDSVGLALGWCEALDRQEKASQEQ XXXXXXXXXXXXXX    ERSREELEARH EELRLARQSH               ASLLE RE+LAAA      LARA+KDGARALVAWREASRRGRKAEAIAARLLERRRGKALR+WRSRTLALRAR  AEAAGI ASARRGLR+A+GTWTRNVARRRVA+ERRLAGARLV +VLRRSGGAVRRCFGVWRVAA+DAS AQEALAQKEEDEKR AFV EAS HCGG           ELSRAEARAQLLSERVADMC RRRNDRVVRSACRAWL +AQQMGQ RENVRLAELWRRRQGLKSALTRW       REVIVP+ +T PPALTAEEGPP TGTGPPAVDLAESET ME VGPWG IGENPAAAAVAGEA GGR    P+GIGGGQAPTR GKRVLVS GRE VV+AAVAHSPIRA+ALA GTGGGSSV SSS ADRAAASPRAA NTAFRDNNAT DG L RLRLETLT AAAG FRQQR+RT ALRLLSAWRR+AATERSKREALSRLVRGARRRRLRGGLGRWRAGT+AVRAKEERRAAREGA+ XXXXXXXXXXXXXXXXXXXX          KLATEREKELR+EKAAGE LREAVERLQ E
Sbjct:  208 VPALNKQVAPERFTEGDARAVRTLAPAIAAGXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXXXXXXATEPSSRGCPEELLLLRDGLRRAREGLGADRARLLVLDADLAPGVKTGGGGRLRLQLWHEDPAPPWSVGTSGALGRSGXXXXXXGVRLDAGLHGVALSTGRAVRSADALSDPLYDREPDVREGFLARSVLCAPLLERQPXXXXXXXXXXXXXTDRRSTASRGGIASGVPLAVLELTLGRRSVPVDDDGRATEASIARGSGLGESGGGRTRKAFAEGDEALAEAFARDLAGLLSGLLAAGFRPRAAATTLAGGGGHLGTAGGAGRSRGSARDGRASWQQRRAIPSVDGACEDD-RGRLLTRADLGRPTQQQNGHGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRASVATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHGRVVTDEQRRGTAGVGVANVEPGGRQQQVEAIEARSWATAQRVLEHCKESLAADKQPRQHHPPDGSANPAVATASSTSSSHAASITPAVRSLVSTLLPGCTAVLLLLDRATGRLRDAGFETDHPDAGGADLATPQQPPPVQREDMARRALTSGKALLSRMADPGEAAAAPEGXXXSSDLSRRRIFCVPVCGSAERTYGVLQLFLP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAKVVTDSVGLALGWCEALDRQEKASQEQXXXXXXXXXXXXXXXXXTRERSREELEARHNEELRLARQSHXXXXXXXXXXXXXXXASLLEGREDLAAAAARALALARAKKDGARALVAWREASRRGRKAEAIAARLLERRRGKALRQWRSRTLALRARVRAEAAGIEASARRGLRQAVGTWTRNVARRRVAKERRLAGARLVGDVLRRSGGAVRRCFGVWRVAAKDASVAQEALAQKEEDEKRRAFVHEASIHCGGVDRVYSAAGLLELSRAEARAQLLSERVADMCGRRRNDRVVRSACRAWLGIAQQMGQRRENVRLAELWRRRQGLKSALTRWGLENRRWREVIVPRAQTTPPALTAEEGPPATGTGPPAVDLAESETRMEGVGPWGSIGENPAAAAVAGEA-GGRGATLPSGIGGGQAPTRGGKRVLVSEGREGVVKAAVAHSPIRADALASGTGGGSSVPSSSIADRAAASPRAAGNTAFRDNNATGDGDLGRLRLETLTEAAAGWFRQQRDRTFALRLLSAWRRSAATERSKREALSRLVRGARRRRLRGGLGRWRAGTQAVRAKEERRAAREGASXXXXXXXXXXXXXXXXXXXXXRGRAAAE---KLATEREKELRVEKAAGEELREAVERLQTE 1550          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8400.19777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYZ9_ECTSI0.000e+085.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3T9_9PHAE0.000e+085.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 992..1012
NoneNo IPR availableCOILSCoilCoilcoord: 1338..1358
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 120..235
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 114..331
e-value: 5.9E-11
score: 44.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8400contigEcto-sp13_S_contig8400:21..5413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8400.19777.1mRNA_Ecto-sp13_S_contig8400.19777.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8400 2..5413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8400.19777.1 ID=prot_Ecto-sp13_S_contig8400.19777.1|Name=mRNA_Ecto-sp13_S_contig8400.19777.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1358bp
MLLARVGSGMTSNQRRSGASLAEARGGAPHLPEPPTAVIQALNKQVAPER
FTEGDARAVRTLAPAIAAGSRLIVSLLNFSGRGGGANPAREHASPFCCPP
ATEPSSRGCPEELLLLRDGLRRAREGLGADRARLFVLDADLAPGVTTGAG
GRLRLQLWHEDPAPPWSVGTSGALGRSGGGGGRGVRLDAGLHGVALSTGR
AARSADALSDPLHDREPDVREGFLARSVLCAPLLERQPPPSGGDTAAAAQ
ETDRGSTTRRGGIASGVPFAVLELTLGRRSVPVDDDGRASEASIARGSGL
GESGGRTRKAFTEGDEALAEAFAHDLAGLLSGLLAAGFRPRASATTLAGG
GGHLGTAHGVGRSRGSARDGRASWQQRRAIPSVDGACDDDDRGRLLTRAD
LGRPTQQQNGHGQTGLEGVEARGRVRGQMGSSSTSTAVGVSPLGAGVRAS
VATTGQKSPDGDEGPLPPSPATEGSSGYGGGSPTTSPHGLVVSDEQRRGT
ASAGVANVEPGGRQQQVEAIEARSWATAQRVLEHCKESLAADKRPRQHHF
PDGSANPAVATASSTSSSHATSITPAVRSLVSTLLPGCTAVLLLLDRATG
RLRDVGFETDHPDEGGADLATPQQPPPVQREDVARRALASGKALLSRMAD
PGEAAATPEGGGGSSDLSRRRIFCVPVCGTAERPYGVLQLFLPPAPPPAA
AGGNGAAAALVSPPSSSRGKAAVPPPPPLPPPPPSFFMAAKVVTDSVGLA
LGWCEALDRQEKASQEQAAAAARTAAAAAAARERSREELEARHKEELRLA
RQSHAARAAETADAHARAVASLLEDREELAAAAARALALARARKDGARAL
VAWREASRRGRKAEAIAARLLERRRGKALREWRSRTLALRARDGAEAAGI
GASARRGLRRAIGTWTRNVARRRVAEERRLAGARLVAEVLRRSGGAVRRC
FGVWRVAARDASAAQEALAQKEEDEKRTAFVDEASFHCGGELSRAEARAQ
LLSERVADMCRRRRNDRVVRSACRAWLDLAQQMGQMRENVRLAELWRRRQ
GLKSALTRWREVIVPQPRTIPPALTAEEGPPTTGTGPPAVDLAESETWME
RVGPWGLIGENPAAAAVAGEARGGRSVPPPAGIGGGQAPTRSGKRVLVSG
GREVVEAAVAHSPIRANALACGTGGGSSVRSSSRADRAAASPRAAENTAF
RDNNATWDGSLERLRLETLTVAAAGGFRQQRNRTSALRLLSAWRRAAATE
RSKREALSRLVRGARRRRLRGGLGRWRAGTRAVRAKEERRAAREGAAASA
AKAKEAVAEAAVAAEAAAAAAKGRAAAEKLATEREKELRLEKAAGEGLRE
AVERLQKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029016GAF-like_dom_sf