prot_Ecto-sp13_S_contig840.19776.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig840.19776.1
Unique Nameprot_Ecto-sp13_S_contig840.19776.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig840.19776.1 vs. uniprot
Match: D8LPQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ1_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.760e-97
Identity = 161/182 (88.46%), Postives = 168/182 (92.31%), Query Frame = 0 
Query:    1 MARKELPQALTLEKFAAGKDGRSNAFKKKKQAKKRKLFEKAQLKRQYAKLLKKEAATARGEQGPEAPQPDGAAGVGNEKHADGLVLTPNRKRKEEAGGGELKRRRELSDDRESGERQHVAEGRKEEQRKPGKWRRPEHRPDPFKAAK-VKGVTTRRSFGGSLKTDVQHGALLVGLVQHITGV 181
            MARKELPQALTLEKFAAGKDGR+NAFKKKKQAKKRKLFEKAQLKRQYAKLLKKEA TARGE GP+AP+ DGAAGVG EK A  LVLTPNRK KEEA GGELKRRRELSDDR+SGERQ VAEGRK+EQRKPGKWRRPEHRPDPFKAAK ++GVTTRRSFGGS KTDVQH ALLVGLVQHIT V
Sbjct:    1 MARKELPQALTLEKFAAGKDGRANAFKKKKQAKKRKLFEKAQLKRQYAKLLKKEAVTARGEHGPDAPRSDGAAGVGKEKRAGRLVLTPNRKWKEEASGGELKRRRELSDDRQSGERQQVAEGRKQEQRKPGKWRRPEHRPDPFKAAKALQGVTTRRSFGGSPKTDVQHSALLVGLVQHITAV 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig840.19776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPQ1_ECTSI1.760e-9788.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig840contigEcto-sp13_S_contig840:18230..19333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig840.19776.1mRNA_Ecto-sp13_S_contig840.19776.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig840 18230..19333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig840.19776.1 ID=prot_Ecto-sp13_S_contig840.19776.1|Name=mRNA_Ecto-sp13_S_contig840.19776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MARKELPQALTLEKFAAGKDGRSNAFKKKKQAKKRKLFEKAQLKRQYAKL
LKKEAATARGEQGPEAPQPDGAAGVGNEKHADGLVLTPNRKRKEEAGGGE
LKRRRELSDDRESGERQHVAEGRKEEQRKPGKWRRPEHRPDPFKAAKVKG
VTTRRSFGGSLKTDVQHGALLVGLVQHITGV*
back to top