prot_Ecto-sp13_S_contig840.19774.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig840.19774.1
Unique Nameprot_Ecto-sp13_S_contig840.19774.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length602
Homology
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: D8LPP9_ECTSI (CCCH-type Zn finger-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPP9_ECTSI)

HSP 1 Score: 999 bits (2584), Expect = 0.000e+0
Identity = 558/601 (92.85%), Postives = 567/601 (94.34%), Query Frame = 0
Query:    1 MFGTGGGFXXXXXFVPTPAFGERETTPAVGAAETPGGQVSTAQPFGQQASGTNAAPLPNPGKIAAAAPSAGDCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGGRFGGGXXMAAGRGGXXXXXGGPRSQGWETVDRSKQTCVFFVQGKCTKGDACPFSHAIPSEGGVSQAAEANHPPQRAAVAEGRPQPPAMDSSPSPVPATRNDNVPQTKTSASEASRGGETKAVGIPGQSLALVRVSGAGREEARSISRRVGTFGDGASKADPALAVASAGKTYVTARNGQARATSSSDQRQEVPGIIVLPDGGLVTRKRAAELQLRKDERVDAEARNVRQRDGRQQGRAQERRPTSGSRGVLPVGRVPILDRLGPVTQASDTAPTTERIVAPARIRREAPTLQAREREEPRPHVTPVERPGLQPFSSSSLPRSRVMASALPTRRTGGGRGGDGDSTSAIARPAVVAHRKSSALDFKIPTLDEIKSRKAREEVAAPRVATKRTQALSASGGEKPLTATPAAPAAVEEAPTSPNSVVSTTVGGQPSLPLXXXXXXXXXXXXVQSDPPQLDAEDMDEFSEWL 601
            MFGTGGGFXXXXX VPTP FG+RETTPAVGAAETPGGQVSTAQPFGQQASGTNAAP PNPGKIAAAAP+AGDCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGGRFGGGXXMAAGRGGXXXX GGPR QGWETVDRSKQTCVFFVQGKCTKGDACPFSHAIPSEGGVSQAAEANH PQRAAV EGRPQPPAMDSSP+PVPA RND+VPQTKTSASEASRG ETKA GIPGQS A VRVSGAGREEARS SRRVG FGDGASKADPALAVASAGK YVTARNGQARATSSSDQRQE PGIIVLPDGGLVTRKRAAELQLRKDER DAEARNVRQRDGR+QGRAQERRPTSGSRGVLPVGRVPILDRLGPVTQASDTAPTTE IVAPARIRREAPTLQAR+REEPRPHVTPVERPGLQP SSSSLPRSRVMASALPTRRTGGGRG  GDSTSAIARPAVVA RKSSALDFKIPTLDEIKSRKA+ EVAAPRV TKR QA SAS GEKP++ATPAAP AVEEAPTSPNSVVSTTVG QPSLPLXXXXXXX     VQSDPPQLDAEDMDEFSEWL
Sbjct:    1 MFGTGGGFXXXXXXVPTPGFGQRETTPAVGAAETPGGQVSTAQPFGQQASGTNAAPSPNPGKIAAAAPAAGDCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGGRFGGGXXMAAGRGGXXXXRGGPRLQGWETVDRSKQTCVFFVQGKCTKGDACPFSHAIPSEGGVSQAAEANHLPQRAAVPEGRPQPPAMDSSPAPVPAARNDSVPQTKTSASEASRGEETKANGIPGQSSASVRVSGAGREEARSFSRRVGAFGDGASKADPALAVASAGKAYVTARNGQARATSSSDQRQEAPGIIVLPDGGLVTRKRAAELQLRKDERGDAEARNVRQRDGREQGRAQERRPTSGSRGVLPVGRVPILDRLGPVTQASDTAPTTEWIVAPARIRREAPTLQARKREEPRPHVTPVERPGLQPSSSSSLPRSRVMASALPTRRTGGGRGAGGDSTSAIARPAVVAQRKSSALDFKIPTLDEIKSRKAKAEVAAPRVTTKRDQAFSASNGEKPMSATPAAPDAVEEAPTSPNSVVSTTVGVQPSLPLXXXXXXXT----VQSDPPQLDAEDMDEFSEWL 597          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A836CN26_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN26_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.390e-11
Identity = 42/119 (35.29%), Postives = 56/119 (47.06%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGGRFGGGXXMAAGRGGXXXXXGGPRSQGWETVDRSKQTCVFFVQGKCTKGDACPFSHAI 190
            DC++FL+  C +G  C FRHSE A+A+ + CR+W  G CK    C F+H                 G X       XXXXX               +TC++F QG C  GDACP+ H +
Sbjct:   24 DCHFFLKTGCRRGAECKFRHSEVAKANPVPCRYWPMGTCKSGSACAFVHS----------------GPXXXXXXXXXXXXXXXXXXXXXPAPSGGLRTCIYFAQGNCANGDACPYVHCM 126          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A7S3G5L2_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G5L2_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 2.910e-10
Identity = 39/123 (31.71%), Postives = 51/123 (41.46%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGGRFGGGXXMAAGRGGXXXXXGGPRSQGWETVDRSKQTCVFFVQGKCTKGDACPFSHAIPSEG 194
            DC Y+LQG C +G+NC++RH EAA  +   C  W  G C + + CP  HP  G                                        R +  C FF++G C KG ACPF H   +EG
Sbjct:    6 DCMYYLQGNCNQGDNCVYRHCEAALFTKEECALWNEGKCTN-MKCPKRHPSAG-------------------------------------VKARGQTICRFFLEGTCIKGSACPFVHPKNAEG 90          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A7S4KNQ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KNQ6_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 5.890e-10
Identity = 41/121 (33.88%), Postives = 55/121 (45.45%), Query Frame = 0
Query:   70 AGDCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHP-VRGQGMGGGRGGRFGGGXXMAAGRGGXXXXXGGPRSQGWETVDRSKQTCVFFVQGK-CTKGDACPFSH 188
            A DC+YFLQG+CTKG++C +RHS  A  +  VC+FW +  C +   C F HP + G G+                             +      DRS+  C +  Q   CTK D CPF H
Sbjct:    5 AADCFYFLQGSCTKGSSCTYRHSSVALGNHTVCKFWLSNSCTNTA-CTFRHPAIPGHGV-----------------------------AAAPPPKDRSQTPCYWETQPSGCTKED-CPFLH 94          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A6J8A8H3_MYTCO (ZC3H11 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8A8H3_MYTCO)

HSP 1 Score: 67.8 bits (164), Expect = 4.860e-8
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLH 120
            DC+++    CTKG NC FRH EAA++S + C FWQ G C    NCP+ H
Sbjct:    7 DCHFYYNSNCTKGENCAFRHCEAAKSSMVTCTFWQQGICSKP-NCPYRH 54          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A0L7REX6_9HYME (Zinc finger CCCH domain-containing protein 11A n=4 Tax=Apinae TaxID=70987 RepID=A0A0L7REX6_9HYME)

HSP 1 Score: 63.2 bits (152), Expect = 5.030e-8
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLH 120
            DCY+F   TCTKG+NC FRH  +A    I+C FWQ G C D+ +C F H
Sbjct:    9 DCYFFYYSTCTKGDNCPFRHEPSALGCEIMCVFWQQGKCLDE-HCNFRH 56          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: UPI0009A2A7D5 (LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2A7D5)

HSP 1 Score: 67.4 bits (163), Expect = 5.820e-8
Identity = 29/49 (59.18%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLH 120
            DCY++   TCTKGNNCLFRH EAA  S  VC  WQ G C   V C F H
Sbjct:    7 DCYFYFYSTCTKGNNCLFRHCEAALGSETVCTLWQEGRCFRQV-CKFRH 54          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A8B6DG41_MYTGA (Uncharacterized protein n=4 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DG41_MYTGA)

HSP 1 Score: 67.0 bits (162), Expect = 8.490e-8
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLH 120
            DC+++    C+KG NC FRH EAA++S + C FWQ G C    NCP+ H
Sbjct:    7 DCHFYYNSNCSKGENCAFRHCEAAKSSMVTCTFWQQGICSK-ANCPYRH 54          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: A0A1B6EM06_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6EM06_9HEMI)

HSP 1 Score: 62.4 bits (150), Expect = 1.300e-7
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   72 DCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLH 120
            DCY++   TCTKG+NCLFRH E A    +VC +W+ G C +  +C F H
Sbjct:   43 DCYFYYYSTCTKGDNCLFRHEEGALGCEVVCAYWKEGKCFNQ-HCNFRH 90          
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Match: UPI001C9C878F (zinc finger CCCH domain-containing protein 11B-like isoform X1 n=2 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C878F)

HSP 1 Score: 63.5 bits (153), Expect = 6.730e-7
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   68 PSAGDCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLH 120
            P   DCY+F   TCTKG+NC FRH  +A    ++C++WQ G C ++ +C F H
Sbjct:   24 PKNNDCYFFYYSTCTKGDNCAFRHEPSALGCEVMCQYWQQGNCLNE-HCNFRH 75          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig840.19774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPP9_ECTSI0.000e+092.85CCCH-type Zn finger-containing protein n=2 Tax=Ect... [more]
A0A836CN26_9STRA1.390e-1135.29Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3G5L2_9EUKA2.910e-1031.71Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A7S4KNQ6_9EUKA5.890e-1033.88Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A6J8A8H3_MYTCO4.860e-851.02ZC3H11 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=... [more]
A0A0L7REX6_9HYME5.030e-853.06Zinc finger CCCH domain-containing protein 11A n=4... [more]
UPI0009A2A7D55.820e-859.18LOW QUALITY PROTEIN: zinc finger CCCH domain-conta... [more]
A0A8B6DG41_MYTGA8.490e-848.98Uncharacterized protein n=4 Tax=Mytilus galloprovi... [more]
A0A1B6EM06_9HEMI1.300e-748.98Uncharacterized protein (Fragment) n=2 Tax=Cuerna ... [more]
UPI001C9C878F6.730e-745.28zinc finger CCCH domain-containing protein 11B-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 97..122
e-value: 5.4E-4
score: 29.3
coord: 165..190
e-value: 2.1E-4
score: 30.7
coord: 67..93
e-value: 0.002
score: 27.4
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 164..191
score: 15.507
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 96..123
score: 12.765
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 67..94
score: 14.145
NoneNo IPR availablePFAMPF18345zf_CCCH_4coord: 170..188
e-value: 5.6E-8
score: 32.6
NoneNo IPR availableGENE3D4.10.1000.10coord: 157..205
e-value: 3.7E-6
score: 28.7
coord: 64..125
e-value: 5.1E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR15725ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAININGcoord: 71..303
NoneNo IPR availablePANTHERPTHR15725:SF0ZINC FINGER CCCH-TYPE-CONTAINING 11Acoord: 71..303
IPR041686Zinc-finger CCCH domainPFAMPF15663zf-CCCH_3coord: 71..120
e-value: 5.3E-14
score: 52.4
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 73..92
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 164..189
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 100..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig840contigEcto-sp13_S_contig840:5503..9990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig840.19774.1mRNA_Ecto-sp13_S_contig840.19774.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig840 5503..9990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig840.19774.1 ID=prot_Ecto-sp13_S_contig840.19774.1|Name=mRNA_Ecto-sp13_S_contig840.19774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=602bp
MFGTGGGFGTGGGFVPTPAFGERETTPAVGAAETPGGQVSTAQPFGQQAS
GTNAAPLPNPGKIAAAAPSAGDCYYFLQGTCTKGNNCLFRHSEAARASGI
VCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGGRFGGGRGMAAGRGGFGG
GRGGPRSQGWETVDRSKQTCVFFVQGKCTKGDACPFSHAIPSEGGVSQAA
EANHPPQRAAVAEGRPQPPAMDSSPSPVPATRNDNVPQTKTSASEASRGG
ETKAVGIPGQSLALVRVSGAGREEARSISRRVGTFGDGASKADPALAVAS
AGKTYVTARNGQARATSSSDQRQEVPGIIVLPDGGLVTRKRAAELQLRKD
ERVDAEARNVRQRDGRQQGRAQERRPTSGSRGVLPVGRVPILDRLGPVTQ
ASDTAPTTERIVAPARIRREAPTLQAREREEPRPHVTPVERPGLQPFSSS
SLPRSRVMASALPTRRTGGGRGGDGDSTSAIARPAVVAHRKSSALDFKIP
TLDEIKSRKAREEVAAPRVATKRTQALSASGGEKPLTATPAAPAAVEEAP
TSPNSVVSTTVGGQPSLPLPAPAPAPTPTPTVQSDPPQLDAEDMDEFSEW
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR041686Znf-CCCH_3
IPR036855Znf_CCCH_sf