mRNA_Ecto-sp13_S_contig84.19772.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: D7FTB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB6_ECTSI) HSP 1 Score: 802 bits (2072), Expect = 2.960e-283 Identity = 415/500 (83.00%), Postives = 421/500 (84.20%), Query Frame = 1
Query: 1 MQQCRVVSVIKSPAPNPGTPASLLSFVQAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFDHAEQLAQQVTFSDDFADDTTATGATEDSGGNIFRTMVSTTFLVVVLALVGGVFWFGVVALKVKWRRAGERGAGAYEAVG 1500
MQQCRVVS IKSP PNPGTPAS L F QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIE MDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPM VLTEPNRFASLLAAPHGPCLAQQKADN AYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQ LLYGVAHFLGWHFDV+GAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRT+TWTPEFGQ+EVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFD AEQ+AQ +TFSDDFADDT AT ATEDSGG+I RTMV KWRRAGERGAGAYEAVG
Sbjct: 1 MQQCRVVSGIKSPPPNPGTPASPLPFFQAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIESMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMAVLTEPNRFASLLAAPHGPCLAQQKADNAAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQ-----------------------------------------LLYGVAHFLGWHFDVKGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTFTWTPEFGQREVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFDQAEQMAQHITFSDDFADDTAATDATEDSGGDIVRTMV-------------------------KWRRAGERGAGAYEAVG 434
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: A0A6H5L0W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W9_9PHAE) HSP 1 Score: 473 bits (1217), Expect = 4.100e-157 Identity = 238/259 (91.89%), Postives = 241/259 (93.05%), Query Frame = 1
Query: 1 MQQCRVVSVIKSPAPNPGTPASLLSFVQAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAG 777
MQQCRVVSVIKSP PNPGT LL QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYI MDFLPPTLGSG PTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEP+RFASLLAAPHGPCLAQQKADN AYDSTRG ELIQQSRNITDVVS+ACGVPTEAYTNVDNGKEGLVLGVKDV DMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQ + G
Sbjct: 1 MQQCRVVSVIKSPPPNPGTAPFLLPCFQAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIGSMDFLPPTLGSGSMPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPDRFASLLAAPHGPCLAQQKADNAAYDSTRGVELIQQSRNITDVVSKACGVPTEAYTNVDNGKEGLVLGVKDVGDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQANHLLG 259
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: K3WPM1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPM1_GLOUD) HSP 1 Score: 305 bits (780), Expect = 7.680e-90 Identity = 170/426 (39.91%), Postives = 239/426 (56.10%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICN-DVPFD--HAEQLAQQVTFSDDFADDTTATGATEDSG 1350
+APN VV +CP N N Y VP QLTE GM Q L G ++R+ Y+E FL P+L F ++ ++D+A RC Q+A A+ GL+P GTGP GFP++P+PV + + AAP GPC A AD Y TR EL+ +++ + + V + CGV E G E LVLGVKD++DM FD + LP ++ + + QLAFT L ERYYS R+ITYW G F LL++ NSAA + ++ Y YHGHRELL+G+ LGW+FD EG P ALG +++ PATTM FELH + +D+ A Y+V+T+ W+P+ G+++V L+ CS +E C L AI++ + TG+WQEICN +P H Q + +DD + T +T +G
Sbjct: 38 RAPNGVVAHICPTNSGNLNAYKVPLEQLTEIGMRQMLAAGEYVRKVYVEEKGFLSPSLNGVNHTHFEAYFRADAATRCHQSATALGYGLYPDGTGPKGFPHEPVPVTMQLLKNEHEFAAPKGPCAATLHADLGVYAETRALELLDENQKMLEKVGEICGVSVEQIPTTPGG-EDLVLGVKDIADMFIFDRDEELPPTKGLTTEISAQIEQLAFTNLMERYYSTDREITYWVGGFADLLLNNLNSAA-KPTSPSPTEYRYYSYHGHRELLHGLGKMLGWNFDFEGLPKALGMTALHPATTMAFELHTKI-------------TRDDTEA------YFVKTFIWSPKTGREQVKLEKCSSLE----CPLDEFNAIITKHISKTGTWQEICNFGIPAQNQHLVQQGSSASVTDDASTGTAGVWSTMSNG 438
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: A0A1V9Y910_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y910_9STRA) HSP 1 Score: 302 bits (773), Expect = 2.750e-89 Identity = 162/397 (40.81%), Postives = 227/397 (57.18%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDD-FNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFDHA 1269
+APN + LCP N N AKY+VPP QLTENGM Q G +R Y++++ FL PT+ F S+ ++DSA RC Q+A AM GL+P GTGP GF QP+ V + + AAP GPC A KAD Y ++RG +L++Q+R + + V Q CGV N+ NG E ++ G+KD++DM FDEQQGL LA ++ + + QLAFT L ERYY+ RQ+TYW G F LL + + +H+ G Y YHGHRE+L+G+ LGW F EG P AL +SS+ PATTM+FE+H R + ++V+T+ W+P ++ + L CS VE C L I+ + +Q+TG+W++ICN P +A
Sbjct: 17 RAPNNIAKFLCPNNLGNFAKYHVPPEQLTENGMKQLRSAGQHVRAEYVDKLKFLSPTINGPEHVHFESYFRADSADRCGQSAIAMGYGLYPDGTGPHGFEKQPISVYMQLLKNEHEFAAPKGPCKAVNKADIAMYQTSRGAQLVEQNRELLEKVGQLCGVSVWDIPNLPNG-EDIITGIKDLADMFIFDEQQGLEPLAGMTPELRHQIEQLAFTNLMERYYTTPRQVTYWVGGFADLLLKNVYQPTKPQHEAGSFK---YYSYHGHREMLHGLGKMLGWEFSFEGLPVALNSSSLHPATTMLFEVHSRNNS------------------------FFVKTFLWSPYTSRETIHLSKCSAVE----CPLDEFAGIIKNHIQETGTWEQICNFDPQTYA 381
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: A0A5D6XXA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXA9_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.850e-85 Identity = 170/406 (41.87%), Postives = 229/406 (56.40%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTE--PNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRP-DHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFDH-AEQLAQQ 1287
+APN VV+ +CP A Y+VP QLTE GM Q L G LR Y++ FL P+ F ++ ++D+A RC Q+A A+ GL+P GTGP GFP QP+PV + PN AAP GPC A AD +AY ++R ELI+++R D + + CGV + V G E LVLGVKD++DM FD +GLPR ++ + + + LAF L ERYYS R++TYW G F LL + N+AA H P ++ Y YHGHRELL+G+ LGW+F EG P A+ +++ PATT+ FELH R + TGAE Y+V TY W+P+ +++V L CS C L +AIV+ + TG+WQEICN P A LAQQ
Sbjct: 36 RAPNGVVETICPGAARVNA-YHVPLEQLTEVGMRQMLAAGEHLRAVYVDEKRFLAPSFNGVNNSHFETYFRADAATRCSQSATALGYGLYPDGTGPHGFPRQPVPVTMQLLPNEHD--FAAPKGPCSAVLNADLSAYATSRALELIEKNRAALDAMGEVCGVALDEIPTVPGG-EDLVLGVKDIADMFIFDRDEGLPRAKGLTAEVSDQLEHLAFQHLMERYYSTDREVTYWVGGFADLLLSNLNAAA--HPGSPSPAEYRYFSYHGHRELLHGLGKMLGWNFRFEGLPEAMNMTALHPATTLAFELHART-----DAATGAES-------------YFVETYIWSPKTAREQVALAKCSA----RACPLDEFKAIVATHIAKTGTWQEICNYHPIQAPANDLAQQ 413
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: A0A2D4BT22_PYTIN (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT22_PYTIN) HSP 1 Score: 305 bits (780), Expect = 1.250e-83 Identity = 183/467 (39.19%), Postives = 253/467 (54.18%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICN--DVPFDHAEQLAQQVTFSDDFADDTTATGATEDSGGNIFRTMVSTTFLVVVLALVGGVFWFGVVALKVKWRRAGERG 1476
+APN VV LCP N AN AKY+VP QLTE GM Q + +G +R+ Y++ M FL P+ F S+ +SD+A RC Q+A A+ GL+P GTGP GFP QP+PV + R AAP GPC KAD AY TR L+Q+ ++ + VS+ CG ++ G E +VL VKDV+DM FD Q+ LP LA ++ + + +LAFT L ERYY+ R ITYW G FP LL + AA + ++ Y YHGHRELL+G+ LGW+ G P+ALG +S+ P TTM FELH N TT +E +Y+VRT+ W+P+ ++ V L CS ++ C L AI+ + + TG+WQ+ICN P +QV D ++T A E S T FL+V+ AL+G FG++ ++ R +G
Sbjct: 783 RAPNDVVHALCPKNNANLAKYHVPVEQLTEFGMQQLVAVGEHIRKVYVDEMKFLSPSFNGVNHTHFESYFRSDAATRCSQSATALGYGLYPDGTGPEGFPRQPVPVYMQLLRNEHDFAAPKGPCKPTLKADLDAYAKTRAPVLLQEYKDTLERVSEICGANLLEAPSIPGG-EDVVLAVKDVADMFIFDRQERLPPLAGLTPEVSARLEKLAFTNLMERYYTTDRMITYWNGGFPDLLLGNLYGAANPSSPSPK-EYRYYSYHGHRELLHGLGKMLGWNLSFAGEPSALGMTSLHPGTTMFFELHAEK-----NATTESE-------------HYFVRTFVWSPQTAREAVKLSKCSTLD----CPLDEFNAIIKNHIARTGTWQDICNYHPTPAQSVPATLKQV--------DNSSTQAVEGSE-------TGTAFLIVISALLGLGLIFGILQAVIRMRNFRRQG 1210
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: G4YHC2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YHC2_PHYSP) HSP 1 Score: 283 bits (725), Expect = 6.350e-82 Identity = 163/394 (41.37%), Postives = 220/394 (55.84%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYI-----ERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICN 1248
+APN VV CP NKAN Y VP QLTE GMNQ +G +R TY+ FL +L F ++ ++D+A RC Q+A A+ GL+P GTGPPGFP+QP+P+ + AAP GPC + AD Y TR EL Q R++ D++ + CGV + NV G E +VLGVKD++DM FD +GLP ++ A E + QLAFT L ERYYS R+ITYW G F L++ A R ++ Y +HGHRELL+G+ LGW F EG P AL SS+ P TTM FEL RA E AE+ Q + A+E Y+VRTY W+P ++++ L CS + C L I+++ + TG+W+ IC+
Sbjct: 43 RAPNDVVKVTCPRNKANLDAYKVPLTQLTEIGMNQLQAVGEHVRHTYVVDEPHHEEAFLSRSLNGVNHSHFETYFRADAATRCSQSATALGYGLYPDGTGPPGFPHQPVPITMQLVENEHAFAAPKGPCRSTMDADVAVYAETRAPELFGQYRDVLDLLGEVCGVAVDDIPNVPGG-EDVVLGVKDLADMFIFDRDEGLPLPDGMTVDAREKLEQLAFTNLMERYYSTDREITYWVGGFADLLMNTLQGGAVP-TAPSRAEYRYFSFHGHRELLHGLGMMLGWEFHFEGLPVALNVSSLHPGTTMFFEL--RARELT------AEEAQKQPDAKEA---YFVRTYMWSPFTEREQIKLTKCSVAD----CPLDEFYKIMTNHIARTGTWEAICD 419
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: A0A8K1CT79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT79_PYTOL) HSP 1 Score: 283 bits (724), Expect = 6.640e-82 Identity = 162/390 (41.54%), Postives = 213/390 (54.62%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQE-VVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICN 1248
+APN +V+ +CP N N YNVP QLTE GM Q + +G +R+ Y+E FL T F ++ +SD+A RC Q+A A+ GL+P GTGP GFP QP+PV + + AAP GPC AD Y TR +EL+ Q + +S+ CGV + G E LVL VKD++DM FD + LP L ++ + E + QLAFT L ERYY+ R ITYW G F LL N AA D ++ Y YHGHRELL+G+A +GW F EG PTAL TS++ P TTM FELH RA+ A N DE+ Y+++T+ W P Q+E V L CS + C L I+ + TG+WQ ICN
Sbjct: 39 RAPNDIVERICPNNLKNLEAYNVPLEQLTEFGMQQLVAVGEHIRKVYVEEKKFLSSTFNGVKHAHFETYFRSDAATRCSQSATAVGYGLYPDGTGPKGFPRQPVPVTMQLLQNEHDFAAPKGPCKKTFVADMVKYADTRAKELMTQYNDSLVKMSEICGVNVFDVPKMQGG-EDLVLAVKDIADMFIFDRDEQLPPLDGLTPELSEQLEQLAFTNLMERYYTTDRMITYWNGGFSDLLLGKLNEAAMP-DSPSPKEYRYFSYHGHRELLHGLAKMIGWDFSFEGLPTALNTSALHPGTTMFFELHARANTSATN---------DES--------YFLKTFMWDPTTKQREQVTLSKCSSAD----CPLNEFNNIIKSHIARTGTWQSICN 405
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: A0A662WF36_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WF36_9STRA) HSP 1 Score: 278 bits (710), Expect = 9.280e-80 Identity = 162/396 (40.91%), Postives = 220/396 (55.56%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETY-----IERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAA--TRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICN 1248
+APN VV +CP NKAN Y VP QLTE GMNQ L +G+ +R TY + FL +L F ++ ++D+A RC Q+A A+ GL+P GTGP GFP+QP+P+ + AAP GPC + AD Y TR EL +Q R++ D V++ CGVP E V G E +V+ VKDV+DM FD +GLP ++ E + +LAFT L ERYY+ R+ITYW G F L++ A T G+ + Y +HGHRELL+G+A LGW F EG P AL +S+ P TTM FEL R N TT E+ + A E Y+VRTY W+P +++V L CS + C L I++ + TG+W+ IC+
Sbjct: 43 RAPNDVVQAICPRNKANVEAYKVPLTQLTEIGMNQLLAVGDHVRHTYMVDEPLHEEAFLSRSLNGVNHSHFETYFRADAATRCSQSATALGYGLYPDGTGPTGFPHQPVPITMQLVENEHAFAAPKGPCKSTMNADLAKYAETRAPELFEQYRDVLDQVAKVCGVPIEDMAKVPGG-EDVVMSVKDVADMFVFDHDEGLPLPEGMTADLREKLEELAFTNLMERYYTTDREITYWVGGFGDLLMNTLRGGAVPTAPSAGE---YRYYSFHGHRELLHGLAMMLGWDFHFEGLPEALNVTSVHPGTTMFFELRAR------NLTT--EEALEPPGALEA---YFVRTYVWSPFTEREQVKLTKCSAKD----CPLDEFSEIITGHIARTGTWETICD 419
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Match: F0WMG0_9STRA (Uncharacterized protein AlNc14C156G7650 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMG0_9STRA) HSP 1 Score: 276 bits (707), Expect = 1.670e-79 Identity = 152/399 (38.10%), Postives = 221/399 (55.39%), Query Frame = 1
Query: 82 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIERMDFLPPTLGSGCTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPNRFASLLAAPHGPCLAQQKADNTAYDSTRGEELIQ-QSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQITYWAGDFPPTLLDDFNSAATRHDKGQRPDHLYLGYHGHRELLYGVAHFLGWHFDVEGAPTALGTSSIPPATTMVFELHYRAHEQADNGTTGAEQVQDEASAQEEAGYYYVRTYTWTPEFGQQEVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFDHAEQ 1275
+APN V +CP N AN Y VPP QLT NGMNQ +++G +RE Y+E +FL + F ++ ++D+A RC +A+A+A+GL+P+G+GP GFP Q +PV E + + AAP GPC A D Y + EL Q + +++ D + ACG+ ++ G E L+L VKD++DML FD+Q+GL L + + + QL F L ERYYS+ R ITYW G FP LL + N AA + R ++ Y YHGHRELL+ + LGW F G P A+ T+S+ P TT+ FELH A+ T E+ Y+VRT+ ++P +Q++ L CS ++ C L I+ + + TG+W+ IC +D A Q
Sbjct: 38 RAPNYVTHTICPNNHANLQAYKVPPAQLTVNGMNQLVQVGKHIREIYVETQNFLSESFSGEKRLHFEAYFRADAATRCAHSAEALALGLYPFGSGPEGFPLQLVPVTMELLQHEHVFAAPKGPCKATLARDLAQYAQQKAPELFQGEDKDVLDRLGAACGINMTDVPHLKGG-EDLILAVKDIADMLTFDQQEGLSPLPGLDTDTMKKVEQLGFRNLMERYYSSDRMITYWNGAFPDLLLKNLNDAARPNSPTSR-EYRYFSYHGHRELLHALGKLLGWEFHFNGLPEAMNTTSLEPGTTLFFELH------ANKSDTNQEES------------YFVRTFLYSPATARQQIKLSKCSQLD----CPLLKFNRIIRNHIDRTGTWEAICG---YDEASQ 409 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84.19772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig84.19772.1 >prot_Ecto-sp13_S_contig84.19772.1 ID=prot_Ecto-sp13_S_contig84.19772.1|Name=mRNA_Ecto-sp13_S_contig84.19772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=501bp MQQCRVVSVIKSPAPNPGTPASLLSFVQAPNTVVDELCPANKANRAKYNVback to top mRNA from alignment at Ecto-sp13_S_contig84:23279..32297- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig84.19772.1 ID=mRNA_Ecto-sp13_S_contig84.19772.1|Name=mRNA_Ecto-sp13_S_contig84.19772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9019bp|location=Sequence derived from alignment at Ecto-sp13_S_contig84:23279..32297- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig84:23279..32297- >mRNA_Ecto-sp13_S_contig84.19772.1 ID=mRNA_Ecto-sp13_S_contig84.19772.1|Name=mRNA_Ecto-sp13_S_contig84.19772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig84:23279..32297- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |