mRNA_Ecto-sp13_S_contig8399.19770.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI) HSP 1 Score: 1281 bits (3315), Expect = 0.000e+0 Identity = 703/810 (86.79%), Postives = 727/810 (89.75%), Query Frame = 3
Query: 264 FSRVFAAPCDAAALVYQDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDQSGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTDADDTTKTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSWDGDNNGEEDFVLVALDVGEVDPIPTPAPSQSPLPVPSTXXXXXXXXXXXXXXXXXLTIRAPPETTLAPFTRAPFVLLPPEEGLPTTTTPTPSSAGSGPLQGQTLAPTSPPRGSDPDLASVVGVVAMVVVGVSFFAVCVSCVLGCVTGKDKXXXXXXXXXXXXXXXXXXXXRSXXXXXXXXXXXXQSSPSFLARCRRNRHVFMCTKLGLSAMALASPVDVGLDLYVISGYWMDSHPLWATLLVVLFVLSCRFTIAFAALHPPPDKNVILPLYVFPFWTASYHGLAEEPENIARAATATKQDGEEAEKCLGSFLPIWLRSLFTDWLKAAKNENNWCAWFLILLKFELILVLLCWWAVVLIVGATWVVICQNIGLFKKARGGASEQSLKEEEEKLSQRQSYMNSIMFVEAALESFPQLSFQTYVFFWFGGDPVRFTLSALTSIGSILIALFKYLTTSEKMKAALNKLRAIFRPDAAPA 2693
F V P + +QDGT DEDNLNDAVVNSDGSVVLAGSTEGDW GTNAGLGD AAVKLD+SGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASN GGYDFCAAKLDADGNELWSWQDGTDADDTTK VAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGIN+GSE FVVVKIDGRDGSELWRWQ+GTSA DKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQ VAGAPRAILAGTTEGSWDGDNNGEEDFVLV+LDVGEV+PIPTPAPSQ XXXXXXXXXXX LTIRAP +TT PFTRAPFVLLPPEEGLPTTT P PSSA SG LQGQTLAPTSPP+ SDPDLA+VVGV AM VVGV+ FA CV CVLGC+ G+DKXXXXXXXXXXXXXXXXXX RS XXX Q SPSFLARCRRNR+VFM TKL S MALASPVDVG DL VI GYWMDSHPLW TLLVVLFVLSCRFT+AFAALHPPPDKNVILPLYVFPFW ASYH LAEEPEN AR+A ATK+DGEEAEKCLGSFLPIWLRSLFTDWLKAA N++NWCAWFLILLKFELILVL CWWA+VLIVGATWVVI QNIGLF KA GASEQSL+EEEEKLSQRQSYMNSI FVEAALES PQLSFQTYVFFWFGGDP RFTLSAL +IGSIL+AL+ YLTTSEKMKAALN LRAIFRPDAAPA
Sbjct: 228 FLAVKLGPDGVYSWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWSGTNAGLGDLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNVGGYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINKGSEGFVVVKIDGRDGSELWRWQNGTSAADKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQVVAGAPRAILAGTTEGSWDGDNNGEEDFVLVSLDVGEVEPIPTPAPSQXXXXX-XXXXXXXXXXXXXSTPAPQLTIRAP-KTTPTPFTRAPFVLLPPEEGLPTTTAPAPSSASSGLLQGQTLAPTSPPQDSDPDLANVVGVAAMAVVGVAIFAGCVGCVLGCIKGEDKXXXXXXXXXXXXXXXXXX--RSTXXXERSSGEGSQPSPSFLARCRRNRYVFMFTKLYESVMALASPVDVGTDLSVIYGYWMDSHPLWTTLLVVLFVLSCRFTVAFAALHPPPDKNVILPLYVFPFWAASYHNLAEEPENTARSARATKEDGEEAEKCLGSFLPIWLRSLFTDWLKAADNQDNWCAWFLILLKFELILVLFCWWALVLIVGATWVVIRQNIGLFMKALLGASEQSLEEEEEKLSQRQSYMNSIKFVEAALESVPQLSFQTYVFFWFGGDPARFTLSALIAIGSILVALYTYLTTSEKMKAALNMLRAIFRPDAAPA 1033
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: A0A6H5JZC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE) HSP 1 Score: 391 bits (1005), Expect = 3.380e-124 Identity = 292/795 (36.73%), Postives = 307/795 (38.62%), Query Frame = 3
Query: 309 YQDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDQSGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTDADDTTKTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSWDGDNNGEEDFVLVALDVGEVDPIPTPAPSQSPLPVPSTXXXXXXXXXXXXXXXXXLTIRAPPETTLAPFTRAPFVLLPPEEGLPTTTTPTPSSAGSGPLQGQTLAPTSPPRGSDPDLASVVGVVAMVVVGVSFFAVCVSCVLGCVTGKDKXXXXXXXXXXXXXXXXXXXXRSXXXXXXXXXXXXQSSPSFLARCRRNRHVFMCTKLGLSAMALASPVDVGLDLYVISGYWMDSHPLWATLLVVLFVLSCRFTIAFAALHPPPDKNVILPLYVFPFWTASYHGLAEEPENIARAATATKQDGEEAEKCLGSFLPIWLRSLFTDWLKAAKNENNWCAWFLILLKFELILVLLCWWAVVLIVGATWVVICQNIGLFKKARGGASEQSLKEEEEKLSQRQSYMNSIMFVEAALESFPQLSFQTYVFFWFGGDPVRFTLSALTSIGSILIALFKYLTTSEKMKAALNKLRAIFRPDAAPA 2693
+QDGT DEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLD+SGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGT ADDTTK VAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKL+ANGTLAWRWQ WL+AA NE+NWC WFLILLKFELILVL WWA++LIVGATWVVICQNIGLF KA GASEQSLKEEEEKLSQRQSYMNSI FVEAALES PQLSFQTYVFF FGGDP+RFT+SAL +IGSI++AL+ +LTTSE+MKAALN RAIFR D APA
Sbjct: 65 WQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTGADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLEANGTLAWRWQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWLEAANNEDNWCTWFLILLKFELILVLFSWWAIILIVGATWVVICQNIGLFMKALRGASEQSLKEEEEKLSQRQSYMNSIKFVEAALESVPQLSFQTYVFFRFGGDPMRFTVSALLAIGSIVLALYLFLTTSEEMKAALNMFRAIFRRDGAPA 391
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI) HSP 1 Score: 239 bits (611), Expect = 7.100e-66 Identity = 154/360 (42.78%), Postives = 201/360 (55.83%), Query Frame = 3
Query: 309 YQDGTGDEDNLND-AVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDQSGAVLWKWQSGTSDDELL---VGITSA-----------NSASGSE---VVLVGRTEGSW-AASNAGGYDFCAAKL-DADGNELWSWQDGTDADDTTKTVAVDGDGS-VFLAGYTEGDWNQPNEGE-TDFAVTKLDA-NGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAILDDDSVVVTGYSEGDW--AETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSWDGDNNGEEDFVLVAL 1313
+QDGT DNL A V D S VLAG T+GDW TN G DF AVK Q G W+ Q+GT + + +TS+ SA+G E ++L G T+G W A++AGG DF A + DG++LWSWQDGT+ DD V G GS V LAG T GDW N GE TDFA KL+A +G+ WR+QDG+ ++ V D V LAGY+ G+ GG N G D VVK+D DG LWRWQ GT+ +D AA+ +D S+VV GY+ G W +E NAG D +LD +G+E+W WQ GT D + AA + + +LAG +EG W + G L+A+
Sbjct: 11 WQDGTSGTDNLYGVAAVGGDDSFVLAGRTQGDWAETNEGDFDFMAVKFAQDGTEQWRLQAGTPETDTFHDAAAVTSSPSTVANMAATGTSAAGDESTAIILAGFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLDA-DGGVLWRWQGGTAESDVCSAAAVAEDGSIVVAGYTVGSWGGSEANAGEDDLVVVKLDKDGNELWHWQEGTPLKDRLFAAALCEDGG----FVLAGYSEGDWAAADAGAGGSDLIAV 365
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 213 bits (541), Expect = 1.340e-54 Identity = 148/362 (40.88%), Postives = 196/362 (54.14%), Query Frame = 3
Query: 309 YQDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDF----AAVKLDQSGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNEL-WSWQDGTDADDTT--KTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLD-ANGTLAWRWQDGTED-EEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAA-RLDANGSEM-WRWQAGTDSSDWITAATVSQAVAGAP-RAILAGTTEGSW-DGDNNGEEDFVLVALDVGEVDPIPTPAPS 1355
+Q GT + D LN ++ SDGS VLAG + G W GTNA D AA KLD G +LWKWQ + +A + G VV G G W + G DF A LDAD EL W WQDG++ D T+A +G+ SV +AGYT G+++ N G DF KL+ +G+ WRWQDGT++ ++ G + G L G + G + G N G+ DF VV +D DG+E WRWQDGT+ + L G A+ DD S+++ G ET S F A +L A+G E+ WRWQ G A+ + AGA + ILAG T+GSW DG N G +DF+ V L+ TPAPS
Sbjct: 8 WQAGTAETDYLNAVLMGSDGSSVLAGLSFGLWNGTNADTSDASLRPAATKLDADGNILWKWQHD-------INAFAAAAGEGRSVVTAGFASGGWEGTGLGFVDFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGE-SVVMAGYTSGNFSGVNAGSNDFVAIKLNFTDGSEVWRWQDGTDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLD-VDGNESWRWQDGTTEQEWLVGVAVQDDGSILLAGQQ----METTGDESVFFTALKLQADGEEVTWRWQGGNAGD----ASRLYDMAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIAT----TPAPS 348
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 202 bits (515), Expect = 5.360e-53 Identity = 139/365 (38.08%), Postives = 189/365 (51.78%), Query Frame = 3
Query: 291 DAAAL-VYQDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGT-NAGLGDFAAVKLDQSGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDA-DGNELWSWQDGTDADDT-TKTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGT---EDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAI-LDDDSVVVTGYSEGDWAETNAGGSDFCAA---RLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSW-DGDNNGEEDFVLVALDVGEVDPIPTPA 1349
D A L +Q+GT DED L+DA DG VV AG G G + GLGDF A+K D G W+WQ GT DE GIT+ + + VVL G T G W +N G + A KLD DG+ +W +Q G + ++ A DGS+ + G T+GDW+ G TDF LD +G+ WR+QDG+ +G+ + DG V LAG + G + G N G++DF VVK+ +G W WQDGT + G A +D S+V GY+ G WA A D A +D +G+ +W +QAGT + D V A A+LAG + G+W D + DF V ++ G V P PA
Sbjct: 9 DGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDE---GITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAAL--SDGSVVLAGTTDGNYAGTNAGAQDFAVVKLT-EEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGA----ALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPA 363
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 207 bits (527), Expect = 2.180e-51 Identity = 149/396 (37.63%), Postives = 194/396 (48.99%), Query Frame = 3
Query: 306 VYQDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDQSGAVLWKWQSG------------------------------TSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTDADDTTKTVAV-DGDGSVFLAGYTEGDWN-QPNEGETDFAVTKLDA-NGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRW---------QDGTSATDKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSWDGDNNGEED-FVLVALDVGEVDPIPTPAPSQSP 1364
V+QDGT + D + +GS VLAG+TEG W GTN G D AA+KLD G LW++Q G T +D++ + A S V+ VG+T GSW G DF A +LD +G E+W +QDGT+ +D A+ DGD SV +AG T +++ N G D V KL+A +GT WR+QDGT + ++ V D G+ +AG + G + G N G +DF VK+ S R QDGT+ D L G AI D SV++ G + GDW NAG DF L A+G E+WRWQ G R ILAG T GSW N+ E+ FV V LDV TPAPS SP
Sbjct: 7 VWQDGTSETDVFAGGAMGPNGSCVLAGATEGAWDGTNFGGNDMAAIKLDAEGNELWRYQDGSVVLAGHQNLDFYVTXXXXXXXXXXXXXXXTPEDDIPYWMAMAGDGS---VICVGQTYGSWDGDANGDSDFAAFRLDGNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQTYVNFSGASNSGSADIVVVKLNATSGTEIWRYQDGTSVYDKLGLIAVAEDNGIVVAGSTDGIWSGENAGLDDFAAVKL-----SSFSRLIIMYAHVLPQDGTAENDFLDGVAIQADGSVILGGNTVGDWDGANAGERDFIMVALSADGEELWRWQNGXXXXXXXXXXXXXXX----GRVILAGNTAGSWGATNSLEDAAFVAVMLDVPTS---ATPAPSASP 387
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE) HSP 1 Score: 200 bits (508), Expect = 6.560e-51 Identity = 127/316 (40.19%), Postives = 172/316 (54.43%), Query Frame = 3
Query: 438 AVKLDQSGAVLWKWQSGTSDDELLVGITSAN--------------SASGSE---VVLVGRTEGSW-AASNAGGYDFCAAKL-DADGNELWSWQDGTDADDTTKTVAVDGDGS-VFLAGYTEGDWNQPNEGE-TDFAVTKLDA-NGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAILDDDSVVVTGYSEGDW--AETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSWDGDNNGEEDFVLVAL 1313
AVK Q G W+ Q+GT + + +A+ SA+G E +VL G T+G W A++AGG DF A L DG+ LWSWQDGT+ DD + G GS V LAG T GDW N GE TDFA KL+A +G+ WR+QDG+ ++ V D V LAGY+ G+ GG+N G D VVK+D DG LWRWQ GT+ +D + +D S+V+ GY+ G W +E NAG D +LD +G+E+W WQ GT D + AA + + +LAG +EG W + G L+A+
Sbjct: 2 AVKFAQDGTEQWRLQAGTPETDTFHDAAAASGSPSTVATMAATGTSAAGDESTAIVLAGFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDA-DGGVLWRWQGGTAESDVCSATVVAEDGSIVLAGYTVGSWDGSEANAGEEDLVVVKLDKDGNELWHWQEGTSLKDRLFAAALCEDGG----FVLAGYSEGDWAAADAGAGGSDLIAV 312
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.160e-50 Identity = 131/358 (36.59%), Postives = 188/358 (52.51%), Query Frame = 3
Query: 309 YQDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGT-NAGLGDFAAVKLDQSGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLD-ADGNELWSWQDGTDADDT-TKTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTE---DEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAI-LDDDSVVVTGYSEGDWAETNAGGSDFCAA---RLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSW-DGDNNGEEDFVLVALDVGEVDPIPTPA 1349
+Q+GT ED ++DA DG VV+ G + G G + GLGDF A+K D G W+WQ GT DE+ I++ + + VVL G T+G W +N G + A KLD +DG+ +W +Q G + ++ A DGS+ + G T+GDW+ G DF LD +G+ WR+QDG+ +G+ + DG V LAG + G + G N G++DF VVK+ +G W WQDGT + G A +D S+V GY+ G WA A D A +D +G+ +W +QAGT S D V A A+LAG ++G+W D + DF V ++ G V P PA
Sbjct: 70 WQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEV---ISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAAL--SDGSVVLAGTTDGDYAGTNAGAQDFAVVKLT-EEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGA----ALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPA 417
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 204 bits (519), Expect = 1.650e-50 Identity = 138/397 (34.76%), Postives = 195/397 (49.12%), Query Frame = 3
Query: 360 SDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDQSGAVLWKWQSGTS------------DDELLVGITS------------------------------------ANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTDADDTT-KTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSE-DFVVVKIDGRDGSELWRWQDGTSAT-DKLFGAAILDDDSVVVTGYSEGD--WAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSWDGDNN-GEEDFVLVALDVGEVDPI--PTPAPSQSPLPVPST 1382
SDGS V G T GDW G + +AA+K+D+ GAV+W+W +GT+ +L G T A S SGS V + +G WA + GGYDF A K+D DGN LW WQDGT D V+ D +GSV +AG T D++ P+ G DF KLD+ GT W WQDGT + DG V LAGY+ G + G G E DF VK+D G+E+WRWQ G + ++ ++ +D +V++ G + G ++ G SD L A+G E+WRW+ G+ S D++ A R ++ G+ GSW G+ N G EDF++V L+ +D PT +P+ + P P+T
Sbjct: 3 SDGSSVTTGYTFGDWMGIDVDNPAWAALKVDEEGAVVWEWLNGTTLSYVAGAVIGLDGSVILAGSTVDGXXXXXXXXXXXXXXXXXXXXQDNSIDANCRAYGVAASDSGSVVAVGTINDGEWATPSVGGYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSGPSVGSLDFVAIKLDSGGTTLWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEWSGGLTGEECDFAAVKLDAN-GTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAGRTGGSQVMSDKRVGSSDIATVMLGADGQEIWRWKQGSSSDDFMLR---GMAAGSDGRMVMVGSINGSWGGEPNLGSEDFLVVLLNTSTLDTSTPPTTSPTVALSPAPAT 395
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 196 bits (498), Expect = 4.690e-49 Identity = 136/365 (37.26%), Postives = 190/365 (52.05%), Query Frame = 3
Query: 291 DAAALVY-QDGTGDEDNLNDAVVNSDGSVVLAGSTEGDWGGT-NAGLGDFAAVKLDQSGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDA-DGNELWSWQDGTDADDT-TKTVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTE---DEEFGLMVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTSATDKLFGAAI-LDDDSVVVTGYSEGDWAETNAGG---SDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQAVAGAPRAILAGTTEGSW-DGDNNGEEDFVLVALDVGEVDPIPTPA 1349
D A L Y Q+G+ ++D L DA DG VV AG G G + GLGDF A+K D G W+WQ GT DE++ +T + +A G+ VVL G T+G W +N G + A KLD DG+ +W +Q G + ++ A DGS+ + G T+GDW+ G DF L+ +G+ WR+QDG+E +G+ + DG V LAG + G + N G +DF +VK+ +G W WQDGT D GAA +D S+V GY+ G WA A SD +D +G+ +W +QAGT + VS A A+LAG + G+W D + DF V + G V P PA
Sbjct: 66 DGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVI--LTCSKTADGN-VVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAAL--SDGSVVLAGVTDGDYAETNAGEQDFALVKLT-EEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTTGFETFVGVDVSPDGA----ALLAGYSTGTWEDSTTDFYADFAGVLIATGAVPATPAPA 420 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8399.19770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8399.19770.1 >prot_Ecto-sp13_S_contig8399.19770.1 ID=prot_Ecto-sp13_S_contig8399.19770.1|Name=mRNA_Ecto-sp13_S_contig8399.19770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=637bp MVVVGRDGGVYLAGYSTGAFGGINEGSEDFVVVKIDGRDGSELWRWQDGTback to top mRNA from alignment at Ecto-sp13_S_contig8399:2..6415+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8399.19770.1 ID=mRNA_Ecto-sp13_S_contig8399.19770.1|Name=mRNA_Ecto-sp13_S_contig8399.19770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8399:2..6415+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8399:2..6415+ >mRNA_Ecto-sp13_S_contig8399.19770.1 ID=mRNA_Ecto-sp13_S_contig8399.19770.1|Name=mRNA_Ecto-sp13_S_contig8399.19770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1911bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8399:2..6415+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |