prot_Ecto-sp13_S_contig8395.19767.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8395.19767.1
Unique Nameprot_Ecto-sp13_S_contig8395.19767.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8395.19767.1 vs. uniprot
Match: A0A6H5L7N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7N2_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.280e-46
Identity = 92/96 (95.83%), Postives = 92/96 (95.83%), Query Frame = 0 
Query:    8 DTSAPQALPSPSMTEIPFLANRPDVQDSVNAAHERLGLVTSYLRDIVRETQNFRKAGVAMAKASEDLGASLMSADHLDAPARAESFSDESRGDSGT 103
            DTSAPQALPSPSMTEIPFLANRPDVQDSVNAAHERLGLVT YLRDIVRETQNFRKAGVAMAKASEDLGA LMSAD L APARAESFSDESRGDSGT
Sbjct:    2 DTSAPQALPSPSMTEIPFLANRPDVQDSVNAAHERLGLVTHYLRDIVRETQNFRKAGVAMAKASEDLGAFLMSADQLHAPARAESFSDESRGDSGT 97
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BLAST of mRNA_Ecto-sp13_S_contig8395.19767.1 vs. uniprot
Match: D8LRY2_ECTSI (ArfGAP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY2_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.100e-9
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:   67 MAKASEDLGASLMSADHLDAPARAESFSDESRGDSGT 103
            MAKASE+LGA LMSADHLDAPARAESFSDESRGDSGT
Sbjct:    1 MAKASEELGAFLMSADHLDAPARAESFSDESRGDSGT 37
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8395.19767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7N2_9PHAE1.280e-4695.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRY2_ECTSI1.100e-994.59ArfGAP n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8395contigEcto-sp13_S_contig8395:2046..6395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8395.19767.1mRNA_Ecto-sp13_S_contig8395.19767.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8395 2046..6786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8395.19767.1 ID=prot_Ecto-sp13_S_contig8395.19767.1|Name=mRNA_Ecto-sp13_S_contig8395.19767.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MTSFVSTDTSAPQALPSPSMTEIPFLANRPDVQDSVNAAHERLGLVTSYL
RDIVRETQNFRKAGVAMAKASEDLGASLMSADHLDAPARAESFSDESRGD
SGT
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