prot_Ecto-sp13_S_contig8393.19766.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8393.19766.1
Unique Nameprot_Ecto-sp13_S_contig8393.19766.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: A0A6H5KRS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS9_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 2.420e-189
Identity = 282/312 (90.38%), Postives = 290/312 (92.95%), Query Frame = 0
Query:    1 MPSTVRCVCRRIFRAITARWFISVLIVVACQATSTLRNRGATSATASTCA-RSAXXSSAGATSTCRASRSAFLLSARCRTTFRSQPHRRGVPTRRGTHHRSRRYFPHRYTELLRMGARSGDDSYRGVPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLNFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIRALQKLEDAAEA 311
            MPST+R VCRR FRAITARW +SVLIVVACQATSTLRNR AT A  STC+ + A  SSAGATSTCRASRSAFL S+RC T FRSQPHRRGV TR GTHHR RRYFPHRYTELLRMGA SGD+ Y+G PAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVE SMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNL FIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAI+PQMVPLSQLVLLGIRALQKLEDAAEA
Sbjct:    1 MPSTMRRVCRRPFRAITARWLLSVLIVVACQATSTLRNRCATPAATSTCSMQGACSSSAGATSTCRASRSAFLPSSRCGTKFRSQPHRRGVSTRPGTHHRIRRYFPHRYTELLRMGAGSGDERYQGAPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVELSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAEA 312          
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: D8LN10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN10_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 4.900e-129
Identity = 192/198 (96.97%), Postives = 193/198 (97.47%), Query Frame = 0
Query:  114 MGARSGDDSYRGVPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLNFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIRALQKLEDAAEA 311
            MGARSGD SYRG PAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNL FIDEQEPKSVEEFHIKSQ  VDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAI+PQMVPLSQLVLLGIRALQKLEDAAEA
Sbjct:    1 MGARSGDGSYRGGPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQ--VDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAEA 196          
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: A0A1Y1HTH8_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HTH8_KLENI)

HSP 1 Score: 115 bits (287), Expect = 8.060e-27
Identity = 70/196 (35.71%), Postives = 109/196 (55.61%), Query Frame = 0
Query:  117 RSGDDSYRGVPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTR-----VPGQTLTGVEKRYRTQWISALDFVMQNLNFIDE---QEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIRALQK 304
            R+  D     P G R     L  +CQ +  A  E+CVEN GRP A ++ DFV  ++E    G S++++ ++LQ            V G  LTG E+RYR+QW+  +   +Q L    E   Q+P + +E  I   A +  V+ G++T +EQ+ VKFD+AL+T G +GG  +E   + PQ +P++QLVLL ++ L +
Sbjct:   57 RAASDGTNSQPQGCRS----LDDVCQDIEKAFSEVCVENLGRPAAAALFDFVAATVEAYMLGASRDKVTIQLQYGSKEAYRIERDVAGYRLTGSEERYRSQWLDVIYTTLQLLKQGSEEWRQQPATQDESLI---AIIHRVLEGQRTGEEQSLVKFDRALSTAGASGGATSERRVVAPQWIPVTQLVLLTMKVLNE 245          
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: A0A388LBA0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LBA0_CHABU)

HSP 1 Score: 114 bits (285), Expect = 6.630e-26
Identity = 67/198 (33.84%), Postives = 108/198 (54.55%), Query Frame = 0
Query:  119 GDDSYRGVPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQL----LDST-TRVPGQTLTGVEKRYRTQWISALDFVMQNLNFIDEQEPKSVEEFHIKSQAS-VDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIRALQKLEDAAE 310
            G    R +P G     R L  LC+ +  A  E+CV+N GRP   ++ DF   + E    G++++QL LEL+     +D    +  G  LT  E+RYR+QWI  +   +  +  ++ +E  +  +   +   + V  V+ G++T +EQT VKFD+ALAT G +GG A +   I PQ VP+SQ+VLL ++ + + +   E
Sbjct:  119 GKSEDRELPRGDT-SGRSLPQLCRLVERAFFEVCVQNLGRPAGMALYDFTVATSEAFFKGFTRDQLALELRFGSHHMDGYGVQAAGYRLTSSEERYRSQWIDTIYVTLHMMKVVEPEEASNTPDMGDEWLRNIVHRVLEGQRTGEEQTAVKFDRALATAGASGGAAAQKKVIAPQWVPVSQIVLLTMKVVAEAQARHE 315          
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: A0A2R6W5D4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W5D4_MARPO)

HSP 1 Score: 112 bits (280), Expect = 1.220e-25
Identity = 62/181 (34.25%), Postives = 103/181 (56.91%), Query Frame = 0
Query:  134 KRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLD-----STTRVPGQTLTGVEKRYRTQWISALDFVMQNLNFIDEQEPKSV-----EEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIRALQK 304
            K  L  +C+ +     E+CVEN+GRP   ++ +FV  ++    +G+++++L L+L   D     S     G  LT  E++YR+QW+  +   +Q L  +D Q  +S       + H+ S   V  V+ G+Q+ DEQ+FVKFD+ LAT G +GG   +  A+ PQ +PL+QLVLL ++ + +
Sbjct:   82 KPSLADICRCLQHCFFEICVENRGRPAGTALHEFVGAAVAAYLAGHTRDRLSLQLAYGDNGMEESKLETEGFRLTASEEQYRSQWLDTIYTTLQFLKVVDNQASRSSLVTAQTDSHLFS--IVRRVVEGQQSGDEQSFVKFDRGLATKGASGGAIAQREAVAPQFIPLTQLVLLTMKVVNE 260          
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: A0A0G4F2M6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F2M6_VITBC)

HSP 1 Score: 100 bits (249), Expect = 1.450e-21
Identity = 63/171 (36.84%), Postives = 97/171 (56.73%), Query Frame = 0
Query:  142 QAMNDAILEMCVENKGRPLAKSMTDFVEFSMEG-LASGYSKEQLLLELQLLDST--TRVPGQTLTGVEKRYRTQWISALDFVMQNLNFID-----EQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIRALQK 304
            +++N    E C+ N+GR LA+++ DFVE  ++  +  G S  QL LE Q+       R P + LT  +K  R +WI  +   ++ L  +      E E  S        Q  V   ++G+QT D Q++V FD++LAT G  GGVATE +A+ PQ++PLSQLVLL ++A+ +
Sbjct:   47 RSLNLYYREACLHNRGRSLAEALGDFVEECVDVFIYGGCSPVQLQLETQVEGEIHCERNPLERLTQDDKEARARWIRCVWLTLRTLGVVSVRRDSEVEGPSTSAADAALQGLVSTTVKGQQTGDRQSYVPFDRSLATRGNQGGVATENVAVPPQVIPLSQLVLLTMKAVNE 217          
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Match: A0A2K1KSW5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KSW5_PHYPA)

HSP 1 Score: 95.1 bits (235), Expect = 3.980e-19
Identity = 50/166 (30.12%), Postives = 94/166 (56.63%), Query Frame = 0
Query:  137 LVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQ-----LLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLNFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLL 297
            L  +C+ ++    E+CV+N GR   +++ +FV  +++   +GY+ ++L L++      + +      G  LT  E+ YRTQW++ +   +Q L   D +   S    +++    +   + G++  +EQ+ VKFD+ LAT G +GG  +E + I+PQ VP++Q+VLL
Sbjct:  100 LDDVCRRLHLCFFEICVQNLGRSAGQALHEFVCAAVDAFMAGYTFDRLNLQIVHGSGGMEEFKMENAGYRLTASEEYYRTQWLTTIYVTLQMLKVADNEASASFVTENLQLVQIIHRTLEGQRHGEEQSLVKFDRGLATKGASGGAVSEKLVISPQWVPVTQIVLL 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8393.19766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KRS9_9PHAE2.420e-18990.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN10_ECTSI4.900e-12996.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y1HTH8_KLENI8.060e-2735.71Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A388LBA0_CHABU6.630e-2633.84Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2R6W5D4_MARPO1.220e-2534.25Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A0G4F2M6_VITBC1.450e-2136.84Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2K1KSW5_PHYPA3.980e-1930.12Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 302..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..311
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8393contigEcto-sp13_S_contig8393:3171..5895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8393.19766.1mRNA_Ecto-sp13_S_contig8393.19766.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8393 2507..5955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8393.19766.1 ID=prot_Ecto-sp13_S_contig8393.19766.1|Name=mRNA_Ecto-sp13_S_contig8393.19766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MPSTVRCVCRRIFRAITARWFISVLIVVACQATSTLRNRGATSATASTCA
RSARSSSAGATSTCRASRSAFLLSARCRTTFRSQPHRRGVPTRRGTHHRS
RRYFPHRYTELLRMGARSGDDSYRGVPAGPRPKKRPLVFLCQAMNDAILE
MCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQ
TLTGVEKRYRTQWISALDFVMQNLNFIDEQEPKSVEEFHIKSQASVDVVM
RGRQTNDEQTFVKFDKALATGGVAGGVATECIAITPQMVPLSQLVLLGIR
ALQKLEDAAEA*
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