prot_Ecto-sp13_S_contig12386.1976.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12386.1976.1
Unique Nameprot_Ecto-sp13_S_contig12386.1976.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length65
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12386.1976.1 vs. uniprot
Match: D7FU50_ECTSI (CBF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU50_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.730e-20
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0 
Query:   14 GCRGGQDKAAGVYQAWLEARYLDFLRVLFGWIAEFDDFHRRGPALRT 60
            G  GGQDKAA VYQAWLEARYLDFLRVL GWIAEFDDFHR+GPALRT
Sbjct:  116 GVEGGQDKAARVYQAWLEARYLDFLRVLLGWIAEFDDFHRQGPALRT 162
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12386.1976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU50_ECTSI1.730e-2089.36CBF domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12386contigEcto-sp13_S_contig12386:2670..3533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12386.1976.1mRNA_Ecto-sp13_S_contig12386.1976.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12386 2649..4984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12386.1976.1 ID=prot_Ecto-sp13_S_contig12386.1976.1|Name=mRNA_Ecto-sp13_S_contig12386.1976.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
MTLAVIFREERCCGCRGGQDKAAGVYQAWLEARYLDFLRVLFGWIAEFDD
FHRRGPALRTPCSS*
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