|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig839.19760.1 vs. uniprot
Match: A0A6H5KX29_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX29_9PHAE) HSP 1 Score: 1526 bits (3952), Expect = 0.000e+0 Identity = 1107/1335 (82.92%), Postives = 1134/1335 (84.94%), Query Frame = 1
Query: 1 MPAEAEHASGDARKRTVAVAEFAEFVHALQEFHSKADHDVLDALRVANNGRVGRVFSEADAHVLEIGGASGAGAPAIPVADSPPPSPLVXXXXXXXXSKVEEARLPPRSSRRGKLRVRDSNVSTASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSAQDEAEVDKENQPAAAVAKGRGRPPLPKRKKLGGGTANPADADGSGPKAEPVRRSGRNSGLPPEPTEGSRPRGGSIARAPNSSRGGGCCTQNKCETGDNGDSSSSGDVAAAEIAELRAIKVSSMKVVDLRAALRKLGSSAGGLKAVLQVRLEETIAARVSELETPPQTIEGDQEEREQEEQRDAPAAGAAARSEDASTISGLPSTRSSVAPGAALGPLTRLSMPRLSAESVTVPSPVRASPFFGNDSEQXXXXXXXXXXXXXXXXXXXXXXXGGALEGASGAPESGGGGDGDHGVEDLMDIDSEKLESDDDSGDDIEGMETDTSKIDQRGVPVGEAAAARSAREEDVPKTGASGDMEESEGEGGADPPLSPVPDAGSGVPARAAAADSDTLPVAEDVTEIVPEVTPVDVSSNMVDEEDEEEAEEGEVVLTAEDRKGLADEAAPEESGSPSGTAVEGGAKVECEAAGAGDVSAKGMAVEEERPSGEAAMEDEMDVEEPRSEEGTPKDIFAPPALEDKPVGYGSVSSSSGTQSFPCKTPGSAAVSRSSTSLLSSGGSSITNLPRNDSGVGPAGGSGGDIVGGKRARPIAAQETPGSAAGXXXXXXXXXXXXXXXXXXXKRPKTGKEKVSLQEIMSQMRKTYAKKGGTPGAASKAXXXXXXXXXXDFTATRKPEVAAAXXXXXXXXXXXXXXTPVSKSDARSEAAVVAAAEAXXXXXXXXXXXXXXXXXXXXXXXXX--GKPSNLITTLHSFTSVLSKKNAAAAAAAPLGKWDRLAAGTGASSNARTVPALRKAEEARLLEERRARERATSRVRTQAGGGATVAAAAGKQQLEQLHAASASAARSQGERVTPGGAMARVGAAKAFSTQAAAAGSKSAGVPDGKAVSSAGTGGAPSQPHLAPLRVTGMLSKLVPGGVAGPVGLGTEETALPPSSRKVSDLSSSDLPEPFRRSEDLFVGGAAXXXXXXXVADCDNASVRSAGSTSSSCFSMGVSSTAGGRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLAAMEEAXAKAAQEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAEGKPVAVLKRVSPAAAPASST 3999
MPAE EH SGDARKR VA AEFAEFVHALQEFHSKADHDVLDALRVANNGRVGRVFSEADAHVLEIGGASGAGAPAIPVA+SPPPSPLV KVEEARLPPRSS RGKLRVRDSNVSTASQ XXXXXXXXXX PP AQDEA DKENQPAAAVAKGRGRPPLPKRKKLGGGTANPADAD SGPKAEPVRRSGR SGLPPEPTEGSR RGGSI RAPNSS GG CTQN E GDNGDSSSSGDVAAAEIAELRAIKVSSMKVVDLRAALRKLG+SAGGLKAVLQVRLEETIAAR+SELET P TIEGDQ+EREQE QRDAPAAGA A SEDAS SGLPSTRSSVAPGAALGPLTRLSMPRLSAES VPSPVR+SPFFG+DSE XXXXXXXXXXXXXXXXX GALEGASGAPESGGGGD D GVEDLMDIDSEKLESDDDSGDDIE METDTSKIDQRGV VGEAAAA SAREEDVPKTGASGDME+SEGEGGADPPLSPVPDA SGVPARAAAAD+DTLPV E+VTEIV VTPV V NM +EED+EEAEEGEV+LT E R+GLADEAAPEESGSP GTAVEGGAKVE E AVE++RP+GEAA+ED+MDVEEPRSEEGTP+DIFAPPALEDKPVG+GSVSSSSGTQSFPCKTPGSAAVSRSSTSLLSSGG+SITN P +SGVGP GGSGGD+VGGKRARPIAAQETPGSAA XXXXXXXXXXXXXXXXXXXKRPKT KEKVSLQEIMSQMRKTYAKKGGTPGAASKA DF AT KPEVAAA XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX GKPSNLITTLHSFTSVLSKKNAAAAAAAPLGKWDRLAAG GASSNARTVPALRKAEEARLLEERRARERA SRVRTQ GG ATVAAAAGKQ L+Q HAA ASAARSQGERVTP GAMA GAAKAF+TQAAAAGS +AGVPDGKAVSSAGTGGAPSQPHLAPLRVTGMLSKLVPG VAGP GLG EETALPPSSRKVSDLSSSDLPEPFRRSEDLFVGGA XXXXXXX DCDNAS RSAGSTSSSCFSMGVSSTA GRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLAA +A AKAAQEGA TAAEGKPVAVLKR SPAA PA ST
Sbjct: 1 MPAEVEHTSGDARKRAVAGAEFAEFVHALQEFHSKADHDVLDALRVANNGRVGRVFSEADAHVLEIGGASGAGAPAIPVAESPPPSPLVGAAASPAL-KVEEARLPPRSSHRGKLRVRDSNVSTASQQXXXXXXXXXXDRGKRQRTEVGKKGSGGAAAV--PPLAQDEAGADKENQPAAAVAKGRGRPPLPKRKKLGGGTANPADADRSGPKAEPVRRSGRTSGLPPEPTEGSRARGGSIVRAPNSSGSGGGCTQNNSEAGDNGDSSSSGDVAAAEIAELRAIKVSSMKVVDLRAALRKLGASAGGLKAVLQVRLEETIAARISELETTPPTIEGDQDEREQE-QRDAPAAGAVASSEDASANSGLPSTRSSVAPGAALGPLTRLSMPRLSAESAAVPSPVRSSPFFGDDSEXXXXXXXXXXXXXXXXXXAVGVE--GALEGASGAPESGGGGDADDGVEDLMDIDSEKLESDDDSGDDIEEMETDTSKIDQRGVTVGEAAAAGSAREEDVPKTGASGDMEDSEGEGGADPPLSPVPDAASGVPARAAAADNDTLPVPEEVTEIVQVVTPVGVPGNMAEEEDKEEAEEGEVLLTEEGREGLADEAAPEESGSPGGTAVEGGAKVEGEXXXXXXXXXXXXAVEDKRPNGEAAIEDKMDVEEPRSEEGTPQDIFAPPALEDKPVGHGSVSSSSGTQSFPCKTPGSAAVSRSSTSLLSSGGTSITNAPSKESGVGPPGGSGGDVVGGKRARPIAAQETPGSAA-XXXXXXXXXXXXXXXXXXXKRPKTCKEKVSLQEIMSQMRKTYAKKGGTPGAASKAGNAGARKAAADFMATWKPEVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTVGAAAVGKPSNLITTLHSFTSVLSKKNAAAAAAAPLGKWDRLAAGAGASSNARTVPALRKAEEARLLEERRARERAASRVRTQGGGRATVAAAAGKQHLQQPHAAPASAARSQGERVTPDGAMA--GAAKAFATQAAAAGSNTAGVPDGKAVSSAGTGGAPSQPHLAPLRVTGMLSKLVPGCVAGPAGLGAEETALPPSSRKVSDLSSSDLPEPFRRSEDLFVGGAXXXXXXXXXVDCDNASDRSAGSTSSSCFSMGVSSTAAGRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAAADAKAKAAQEGAAIKAQQARKPEPAAVATVAAPAVTSTIAGATAAEGKPVAVLKRASPAATPACST 1326
BLAST of mRNA_Ecto-sp13_S_contig839.19760.1 vs. uniprot
Match: D8LJ55_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ55_ECTSI) HSP 1 Score: 1408 bits (3644), Expect = 0.000e+0 Identity = 942/1199 (78.57%), Postives = 965/1199 (80.48%), Query Frame = 1
Query: 1 MPAEAEHASGDARKRTVAVAEFAEFVHALQEFHSKADHDVLDALRVANNGRVGRVFSEADAHVLEIGGASGAGAPAIPVADSPPPSPLVXXXXXXXXSKVEEARLPPRSSRRGKLRVRDSNVSTASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSAQDEAEVDKENQPAAAVAKGRGRPPLPKRKKLGGGTANPADADGSGPKAEPVRRSGRNSGLPPEPTEGSRPRGGSIARAPNSSRGGGCCTQNKCETGDNGDSSSSGDVAAAEIAELRAIKVSSMKVVDLRAALRKLGSSAGGLKAVLQVRLEETIAARVSELETPPQTIEGDQEEREQEEQRDAPAAGAAARSEDASTISGLPSTRSSVAPGAALGPLTRLSMPRLSAESVTVPSPVRASPFFGNDSEQXXXXXXXXXXXXXXXXXXXXXXXGGALEGASGAPESGGGGDGDHGVEDLMDIDSEKLESDDDSGDDIEGMETDTSKIDQRGVPVGEAAAARSAREEDVPKTGASGDMEESEGEGGADPPLSPVPDAGSGVPARAAAADSDTLPVAEDVTEIVPEVTPVDVSSNMVDEEDEEEAEEGEVVLTAEDRKGLADEAAPEESGSPSGTAVEGGAKVECEAAGAGDVSAKGMAVEEERPSGEAAMEDEMDVEEPRSEEGTPKDIFAPPALEDKPVGYGSVSSSSGTQSFPCKTPGSAAVSRSSTSLLSSGGSSITNLPRNDSGVGPAGGSGGDIVGGKRARPIAAQETPGSAAGXXXXXXXXXXXXXXXXXXX-KRPKTGKEKVSLQEIMSQMRKTYAKKGGTPGAASKAXXXXXXXXXXDFTATRKPEVAAAXXXXXXXXXXXXXXTPVSKSDARSEAAVVAAAEAXXXXXXXXXXXXXXXXXXXXXXXXXGKPSNLITTLHSFTSVLSKKNAAAAAAAPLGKWDRLAAGTGASSNARTVPALRKAEEARLLEERRARERATSRVRTQAGGGATVAAAAGKQQLEQLHAASASAARSQGERVTPGGAMARVGAAKAFSTQAAAAGSKSAGVPDGKAVSSAGTGGAPSQPHLAPLRVTGMLSKLVPGGVAGPVGLGTEETALPPSSRKVSDLSSSDLPEPFRRSEDLFVGGAAXXXXXXXVADCDNASVRSAGSTSSSCFSMGVSSTAGGRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKK 3594
MPAEAEH SGDARKR VAVAEFAEFVHAL+EFHSKADHDVLDALRVANNGRVGRVFSEADAHVLEIGGASGAGAPAIPVADSPPPSPLV K EEARLPPRSSRRGKLRVRDSNVSTASQ XXXX PPSAQDEA DKEN+PAAAVAKGRGRPPLPKRKKLGGG ANPADADGS PKAEPVRRSGRNSGLPPEPTEGSR RGGSI RAPNSS GG CTQ+ ETGDNGD+SSS DVAAAEIAELRAIKVSSMKVVDLRAALRKLG+SAGGLKAVLQVRLEETIAAR+SELET TIEGDQEE E APAA SEDAS S LPSTRSSVAPG ALGPLTRLSMPRLSAES VPSPVRASPFFG+DSEQXXXXXXXXXXX GA E GVEDLMDIDSEKLESDDD+GDDIE METDTSK DQ GVPV E AAA SAREE+VP+TGASGDMEESEGEGGAD PLSPVPDA SGVPA AAAADSD +PVAE+VTEIV EV PVDVS NMV EEDEEEAEEGEVVLT EDRKGLAD+ ES S SGTAVEGGAKV SAKGMA EEERP+GEAA+EDEM+VEEPRSEE TPKDIF PP+LEDKPVG+GSVSSSSGTQSFPCKTPGSAAVSRSSTSLLSSGGSSI N+PRNDSGVGP GGSGGD+VGGKRARPIAAQETPGSAAG XXXXXXXXXX KRPKTGKEKVSLQEIMSQMRKTYAKKGGTPGAASKA DF ATRKPEV AA XXXXXXXX K DA XXXXXXXXXXXXXXXXXXXXXX GKPSNLITTLHSFTSVLSKKN AAA AAPLGKWDRLAAG GASSNARTVPALRKAEEARLLEERRARERA SR GERVTPGGA RVGAAKAF+TQAAAAGSK AG+PDGKAV SAGTGGAPSQPHLAPLRVTGMLSKLVPGGVAGP G+GTE TALPPSSRKVSDLSSSDLPEPFRRSEDLFVGGAAXXXXXXX ADCDNASVRSAGSTSSSCFSMGVSSTAGGRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKK
Sbjct: 1 MPAEAEHTSGDARKRAVAVAEFAEFVHALEEFHSKADHDVLDALRVANNGRVGRVFSEADAHVLEIGGASGAGAPAIPVADSPPPSPLVGAAASPAPPKAEEARLPPRSSRRGKLRVRDSNVSTASQQETAXXXXADRGKRQRTAVGRKESGGPAAV----PPSAQDEAGADKENRPAAAVAKGRGRPPLPKRKKLGGGNANPADADGSVPKAEPVRRSGRNSGLPPEPTEGSRARGGSIVRAPNSSGDGGGCTQDNSETGDNGDTSSSRDVAAAEIAELRAIKVSSMKVVDLRAALRKLGASAGGLKAVLQVRLEETIAARISELETSLPTIEGDQEEGEXXXXXXAPAAXXXXXSEDASADSRLPSTRSSVAPGVALGPLTRLSMPRLSAESAAVPSPVRASPFFGDDSEQXXXXXXXXXXXASTAVAVAAVGVEGAPEXXXXXXXXXXXXXXXXGVEDLMDIDSEKLESDDDNGDDIEEMETDTSKTDQLGVPVEEVAAAGSAREEEVPETGASGDMEESEGEGGADLPLSPVPDAASGVPAAAAAADSDAVPVAEEVTEIVQEVAPVDVSGNMVGEEDEEEAEEGEVVLTEEDRKGLADK----ESWSLSGTAVEGGAKVXXXXXXXXXXSAKGMATEEERPNGEAAIEDEMEVEEPRSEEETPKDIFVPPSLEDKPVGHGSVSSSSGTQSFPCKTPGSAAVSRSSTSLLSSGGSSIANVPRNDSGVGPPGGSGGDVVGGKRARPIAAQETPGSAAGSAVPSSVGRXXXXXXXXXXXKRPKTGKEKVSLQEIMSQMRKTYAKKGGTPGAASKAGNAGARKAAADFMATRKPEVVAAAAPAAPXXXXXXXXX---KPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV-GKPSNLITTLHSFTSVLSKKNPAAAGAAPLGKWDRLAAGAGASSNARTVPALRKAEEARLLEERRARERAASR----------------------------------GERVTPGGATGRVGAAKAFTTQAAAAGSKLAGIPDGKAVPSAGTGGAPSQPHLAPLRVTGMLSKLVPGGVAGPAGVGTEATALPPSSRKVSDLSSSDLPEPFRRSEDLFVGGAAXXXXXXXXADCDNASVRSAGSTSSSCFSMGVSSTAGGRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKK 1153
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 4001 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Ec32 ortholog description | SAP and inner centromere, ARK-binding domain protein |
| Ec32 ortholog | Ec-02_004820.1 |
| Cds size | 3999 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681464108.9369917-CDS-Ecto-sp13_S_contig839:7354..7522 | 1681464108.9369917-CDS-Ecto-sp13_S_contig839:7354..7522 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig839 7355..7522 - |
| 1681464108.950435-CDS-Ecto-sp13_S_contig839:8192..8429 | 1681464108.950435-CDS-Ecto-sp13_S_contig839:8192..8429 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig839 8193..8429 - |
| 1681464108.9623654-CDS-Ecto-sp13_S_contig839:8737..10346 | 1681464108.9623654-CDS-Ecto-sp13_S_contig839:8737..10346 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig839 8738..10346 - |
| 1681464108.9736156-CDS-Ecto-sp13_S_contig839:11084..13069 | 1681464108.9736156-CDS-Ecto-sp13_S_contig839:11084..13069 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig839 11085..13069 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig839.19760.1 >prot_Ecto-sp13_S_contig839.19760.1 ID=prot_Ecto-sp13_S_contig839.19760.1|Name=mRNA_Ecto-sp13_S_contig839.19760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1333bp
MPAEAEHASGDARKRTVAVAEFAEFVHALQEFHSKADHDVLDALRVANNG RVGRVFSEADAHVLEIGGASGAGAPAIPVADSPPPSPLVVAAPSPAPSKV EEARLPPRSSRRGKLRVRDSNVSTASQQETAAAAAAAAATDRGKRQRTAV GKKDSGGAAAVPPSAQDEAEVDKENQPAAAVAKGRGRPPLPKRKKLGGGT ANPADADGSGPKAEPVRRSGRNSGLPPEPTEGSRPRGGSIARAPNSSRGG GCCTQNKCETGDNGDSSSSGDVAAAEIAELRAIKVSSMKVVDLRAALRKL GSSAGGLKAVLQVRLEETIAARVSELETPPQTIEGDQEEREQEEQRDAPA AGAAARSEDASTISGLPSTRSSVAPGAALGPLTRLSMPRLSAESVTVPSP VRASPFFGNDSEQQQQQQQQQASTAVAVAAAAAVGVGGALEGASGAPESG GGGDGDHGVEDLMDIDSEKLESDDDSGDDIEGMETDTSKIDQRGVPVGEA AAARSAREEDVPKTGASGDMEESEGEGGADPPLSPVPDAGSGVPARAAAA DSDTLPVAEDVTEIVPEVTPVDVSSNMVDEEDEEEAEEGEVVLTAEDRKG LADEAAPEESGSPSGTAVEGGAKVECEAAGAGDVSAKGMAVEEERPSGEA AMEDEMDVEEPRSEEGTPKDIFAPPALEDKPVGYGSVSSSSGTQSFPCKT PGSAAVSRSSTSLLSSGGSSITNLPRNDSGVGPAGGSGGDIVGGKRARPI AAQETPGSAAGSAVSSSVGRSGGGGGGGGGKRPKTGKEKVSLQEIMSQMR KTYAKKGGTPGAASKAGNAGARKAAADFTATRKPEVAAATAPAAVPVAAA VPSTPVSKSDARSEAAVVAAAEAPPAPAATGSTSAEPAAPSAAAAAAAGK PSNLITTLHSFTSVLSKKNAAAAAAAPLGKWDRLAAGTGASSNARTVPAL RKAEEARLLEERRARERATSRVRTQAGGGATVAAAAGKQQLEQLHAASAS AARSQGERVTPGGAMARVGAAKAFSTQAAAAGSKSAGVPDGKAVSSAGTG GAPSQPHLAPLRVTGMLSKLVPGGVAGPVGLGTEETALPPSSRKVSDLSS SDLPEPFRRSEDLFVGGAAAAAAAAAVADCDNASVRSAGSTSSSCFSMGV SSTAGGRPSSTVSSSERVEKKIRDQRAKIALKRQARMEKIKAEEARKKAE LETKELRDAARLEASRRAKQEAEARLREQKAQRQAEVEHRREQERADKEA KDARERQEKEARRLAAMEEAKAKAAQEGAAIKAQQARKLEPAAVAAVAAP AAASTIAGATAAEGKPVAVLKRVSPAAAPASST back to topmRNA from alignment at Ecto-sp13_S_contig839:7355..13069- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig839.19760.1 ID=mRNA_Ecto-sp13_S_contig839.19760.1|Name=mRNA_Ecto-sp13_S_contig839.19760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig839:7355..13069- (Ectocarpus species13 EcNAP12_S_4_19m) ATGCCGGCCGAAGCAGAGCACGCTTCTGGTGATGCTCGGAAGCGGACCGT
GGCGGTGGCGGAGTTCGCAGAGTTCGTGCACGCGCTGCAAGAGTTCCACA
GCAAGGCCGACCACGACGTGCTGGACGCGCTCCGCGTCGCCAACAACGGG
AGGGTCGGCAGGGTGTTTTCAGAGGCGGATGCTCATGTCTTGGAGATAGG
AGGGGCGTCCGGCGCAGGAGCTCCCGCTATCCCCGTCGCTGACTCCCCGC
CACCATCTCCGCTGGTCGTGGCCGCCCCCTCTCCTGCCCCCTCCAAGGTA
GAAGAGGCGCGGCTCCCTCCCCGGTCCTCGCGCCGCGGCAAGCTGCGGGT
ACGCGATTCCAACGTCTCAACCGCATCGCAACAAGAGACTGCCGCCGCCG
CCGCCGCCGCCGCCGCCACCGATCGTGGCAAGCGACAGAGGACAGCAGTA
GGGAAGAAGGATAGCGGTGGTGCTGCTGCTGTGCCGCCATCAGCGCAAGA
TGAGGCAGAAGTAGACAAGGAGAATCAGCCCGCCGCCGCTGTTGCCAAGG
GAAGGGGTCGCCCTCCCCTCCCCAAACGCAAGAAGCTTGGCGGTGGTACC
GCTAACCCTGCCGATGCGGACGGGTCTGGGCCGAAGGCTGAGCCCGTGAG
GAGATCCGGGCGTAACTCCGGCCTTCCGCCCGAGCCGACCGAAGGCAGTC
GCCCGCGTGGCGGCAGCATCGCCCGGGCGCCCAACAGCAGCCGCGGCGGC
GGCTGCTGCACCCAGAACAAGTGCGAAACAGGGGACAACGGCGACAGCAG
CAGCAGCGGTGATGTCGCCGCCGCGGAGATCGCTGAGCTCCGCGCCATCA
AGGTTTCGTCAATGAAGGTCGTGGACCTCAGGGCAGCGTTGCGAAAGCTG
GGATCGTCGGCTGGGGGGCTCAAGGCGGTGCTCCAGGTCAGGCTCGAAGA
GACCATCGCCGCGCGCGTCTCCGAACTCGAGACCCCCCCGCAGACTATCG
AAGGCGACCAGGAAGAGCGAGAACAAGAAGAACAACGGGATGCCCCAGCA
GCGGGCGCTGCAGCAAGGTCCGAGGACGCAAGTACTATCTCGGGGCTGCC
ATCCACCAGGTCGTCGGTTGCACCGGGGGCTGCTCTAGGGCCGCTCACCC
GCCTCTCGATGCCACGGTTATCGGCAGAGTCGGTCACGGTCCCCTCACCC
GTGCGCGCCTCGCCGTTCTTCGGGAACGACTCGGAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGGCGTCTACCGCCGTAGCGGTGGCAGCAGCCGCCGCGG
TTGGTGTTGGGGGCGCTCTGGAAGGCGCCTCCGGTGCTCCTGAGAGTGGC
GGTGGAGGTGATGGTGATCACGGCGTTGAAGATCTGATGGATATCGACTC
GGAAAAGCTTGAGAGCGATGATGACAGCGGGGACGACATCGAGGGGATGG
AAACGGACACTTCGAAGATAGACCAGCGTGGAGTTCCGGTAGGGGAGGCG
GCGGCAGCAAGATCAGCACGGGAGGAAGACGTTCCCAAGACTGGTGCGTC
GGGTGATATGGAGGAAAGCGAGGGGGAGGGTGGTGCCGACCCGCCGTTGT
CGCCGGTGCCGGATGCTGGGTCAGGAGTACCTGCTAGGGCTGCAGCCGCC
GACAGCGATACGCTTCCTGTCGCCGAAGACGTGACGGAGATTGTTCCGGA
GGTCACCCCGGTCGACGTTTCCAGCAACATGGTGGACGAGGAAGACGAGG
AAGAGGCGGAAGAGGGAGAGGTGGTGCTGACAGCAGAGGACAGGAAGGGC
CTTGCTGATGAAGCTGCTCCGGAGGAGAGCGGGTCGCCGAGCGGGACTGC
TGTGGAAGGCGGAGCAAAGGTAGAGTGCGAGGCGGCGGGGGCCGGGGATG
TCTCGGCGAAGGGTATGGCGGTGGAGGAGGAGAGGCCGAGCGGAGAGGCG
GCCATGGAGGATGAGATGGACGTTGAAGAGCCCAGGTGCGTGATGCTCTC
GCCAAGTACGTCTTGGTTGCTGTGGCAAGCTGAAGGATGCGTACTGCTTG
GTGTTCTTCTCTCGCACTGCTGTTGTTGGCTGCAGCACCGCCGCACAGGG
CCTGATGCCTTTACGGCGCCGTAGAGCCGGTTGCCATGTGCCTGTGTTTC
ATTTCCGCGTTGACTTGCATGATGTAGGGTAAAATAGACTTCAGTTGTAC
AGGGGTACCCCCACACTCTGTTCGTGCGTGGACGTCGTCATCACCAGACC
GTTTCGGCCATTGCTCATCTTTGTTGAGATGCACCTTGCCTCTGTGTGCG
TGAATGAAAATACGTCTTGCACGCGAGTCATCGCGCCGGATGCGTGCGGC
GTGATTGCGTCTCGCTTCACTCATCCTCCCGTAGATTGGCGTGTGCGTGA
AATGCACTTGCCTTGTACAAAGTGTGCATTGACCATGCATGGCATACGGG
AAAATACCGGGGGCTTCGGCGTGTGCCGACTCTGTGGTCAATTATGTTCG
CGGTATCGTAGCCTTTGTACATCACCGGCAAGATGCCTTCGTATCGTTCC
CAAGCAGGGTGAGCGTGCCAATCACGGCTTCAGGTGTGGCTATATTTCAT
CAGTTGTACTTCGGTCCGATCGCTGGACAAGGTGCTGTATCAACTTCCGG
GGTAACGACTGATTGTCGTGCGGTCTTTTTTTTATCCTCCTTGGCTCTCT
TTCGCCCATTGATTTGACCACAGGAGCGAAGAAGGAACTCCGAAAGACAT
CTTCGCGCCCCCCGCGCTGGAGGACAAGCCGGTCGGGTACGGCAGTGTTA
GCAGCAGCAGCGGCACACAGAGCTTCCCTTGCAAGACTCCCGGTAGCGCG
GCAGTCTCTAGGTCGTCGACTTCTCTCCTCAGCTCCGGCGGAAGCTCGAT
CACGAACCTTCCCAGGAACGACTCGGGCGTAGGGCCCGCAGGGGGTAGCG
GTGGCGACATCGTCGGCGGGAAGCGCGCTCGTCCTATCGCGGCCCAAGAA
ACGCCGGGCAGCGCGGCCGGCTCTGCTGTCTCCTCGAGCGTCGGCCGGAG
CGGCGGCGGCGGCGGCGGGGGAGGCGGCAAGAGGCCCAAGACCGGCAAGG
AGAAGGTCAGCCTACAGGAGATCATGTCCCAGATGAGAAAGACGTACGCG
AAGAAAGGCGGCACTCCCGGCGCGGCGTCCAAGGCGGGTAACGCAGGAGC
CCGCAAGGCGGCCGCTGATTTCACGGCGACTCGGAAGCCCGAGGTGGCGG
CAGCGACAGCACCGGCGGCGGTGCCGGTGGCGGCAGCTGTCCCCTCGACC
CCGGTCTCGAAATCGGACGCGCGGAGCGAGGCGGCGGTGGTAGCGGCGGC
GGAAGCGCCTCCCGCCCCCGCCGCCACCGGGTCCACCTCGGCCGAGCCCG
CTGCGCCGTCGGCGGCGGCGGCGGCGGCGGCCGGCAAGCCCTCGAACTTG
ATCACCACCCTCCACTCTTTCACGTCCGTGCTGTCCAAGAAGAACGCAGC
CGCGGCCGCCGCCGCGCCCCTCGGCAAGTGGGACCGGCTCGCCGCCGGCA
CCGGCGCTAGCTCGAACGCCCGCACGGTGCCGGCGCTACGGAAGGCCGAA
GAGGCAAGGCTCCTCGAGGAGAGGCGCGCGCGGGAGCGGGCGACGTCGCG
GGTGAGAACGCAGGCGGGGGGGGGAGCAACGGTGGCAGCTGCTGCCGGAA
AGCAGCAGCTGGAGCAGCTGCACGCCGCGTCTGCTTCTGCGGCACGTAGT
CAGGGCGAGCGTGTGACGCCTGGCGGGGCAATGGCGAGGGTGGGGGCCGC
GAAGGCCTTCTCCACGCAGGCAGCGGCGGCGGGATCGAAATCGGCGGGAG
TTCCAGACGGAAAGGCAGTGTCTTCGGCAGGCACCGGTGGTGCTCCTTCC
CAGCCGCATCTTGCCCCCCTGCGTGTCACCGGCATGCTGTCCAAGCTTGT
GCCGGGGGGCGTGGCCGGACCAGTGGGGTTGGGGACGGAGGAAACAGCGT
TGCCCCCGTCAAGCAGGAAGGTGTCCGACTTGTCTTCGTCCGACCTGCCG
GAGCCGTTCCGTCGTTCAGAAGACCTGTTCGTCGGAGGGGCGGCTGCTGC
GGCGGCGGCAGCGGCGGTGGCGGATTGCGACAACGCTAGCGTTAGGTCCG
CCGGCAGTACGTCTTCGTCTTGCTTTTCCATGGGGGTTAGCTCCACGGCG
GGCGGGCGGCCCAGCAGTACCGTGTCCTCTTCGGAGCGCGTCGAGAAGAA
GATCAGGGACCAGCGCGCCAAGATCGCGCTCAAGCGTCAGGCTCGCATGG
AGAAGATTAAGGCGGAGGAGGCGAGGAAGAAGGTGCGCGAAGTATTCTTG
ACGTGTGGTGCTTGTACCTCGTCCATCTGACCTTACCGCTGTTCGTGTCT
TTCCTGAATTTACGGTACCACGTGGTAAGTCACCCTTTGGCGTGGGAGTT
CCGGCTGGGCGTGCCAGTCCTCTTTGTTGTTCAGGCTGTCGGCAAAGTTG
CCTTCGTGTGGGCTCTCTACTCGTATGAGCTTTGACGGACGTGTCATACC
ACTCACGCAAATCTCCTGCGGTCACTTCAATATGTTGTTCTCGTAGTGGG
CATTCGATCTGAACTGCCCCCTGTTCCTCGCCCCTTACAGGCCGAGCTCG
AGACCAAGGAGCTGCGAGACGCGGCCCGCCTGGAAGCCTCCCGCCGCGCC
AAGCAGGAGGCGGAGGCGAGGTTGCGCGAGCAGAAGGCGCAGCGGCAGGC
GGAGGTGGAGCATCGTCGCGAGCAGGAGAGGGCCGACAAGGAGGCGAAGG
ATGCCAGGGAGCGACAGGAGAAGGAGGCCAGGAGACTTGCGGCCATGGAA
GAGGCTAAGGCTAAGGCGGCGCAAGAGGTGCGTTGGCTTAGAGTACCGTG
TTCGTTGGCTGGCGGGTTGAGCGCGGGGGGGGGTGCTAGGGTTTGTTCCA
AATCGGACTGCTTGTGGTGTGTTTCAGCTTTTCGTAGGTGGCTGTGCTAG
CAACTCAAGACTTCAGCCCATTTCACAAGCTTGGCACGAAATTTGCAGTA
TTCTGAGATTAGGCAAGGGTGGGGTTGACGTTGGTTGCTGCCCGAGACGT
GCCTGCCCGAGAGATGTGCTTGCGTGCGTCGTTGGAAGTCGTGGAGTAAT
ATGCCACGCTCGACACGGTGCAATCCAGAGGGGCAAGGTGAAGAACTGAG
CAATGAGGTAGGAGGTTGCTGGGGTAGTTCTGTGCTTGATTGGTCTCATG
TGTAGCGGCAAAGCAAAGCACAGGTGAGAAGGGTGACCGCAACCGAATGT
ACGCCTGCGCAAGAGCCGTGTCTCGGTGCAGCTGGGGTAAGGTTTGAACC
GCGTTGGCACCCTTGTCGGACCACGATGTCAGGGGGTTAATCTTAACACC
TCACATAGCAGGAAATAGCCCTCTTGTGTTCAACTCCCACTCGGCGTGGC
AGTTGCGAGGCGCACCGCGCTCGGTACAGCAACCCTCCCCCAAATCACTC
TCTACTCGAACACCCGTTTGGCGCTCCTGCCGCGACGCACGAACCAGGGG
GCCGCTATCAAGGCGCAACAGGCGAGGAAACTCGAGCCCGCCGCCGTCGC
CGCTGTCGCCGCACCGGCCGCCGCCTCGACAATCGCTGGAGCCACCGCTG
CGGAAGGGAAGCCGGTGGCAGTTCTCAAGCGGGTTTCCCCAGCTGCTGCT
CCCGCTTCTTCGACC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig839:7355..13069- >mRNA_Ecto-sp13_S_contig839.19760.1 ID=mRNA_Ecto-sp13_S_contig839.19760.1|Name=mRNA_Ecto-sp13_S_contig839.19760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3999bp|location=Sequence derived from alignment at Ecto-sp13_S_contig839:7355..13069- (Ectocarpus species13 EcNAP12_S_4_19m) ATGCCGGCCGAAGCAGAGCACGCTTCTGGTGATGCTCGGAAGCGGACCGT GGCGGTGGCGGAGTTCGCAGAGTTCGTGCACGCGCTGCAAGAGTTCCACA GCAAGGCCGACCACGACGTGCTGGACGCGCTCCGCGTCGCCAACAACGGG AGGGTCGGCAGGGTGTTTTCAGAGGCGGATGCTCATGTCTTGGAGATAGG AGGGGCGTCCGGCGCAGGAGCTCCCGCTATCCCCGTCGCTGACTCCCCGC CACCATCTCCGCTGGTCGTGGCCGCCCCCTCTCCTGCCCCCTCCAAGGTA GAAGAGGCGCGGCTCCCTCCCCGGTCCTCGCGCCGCGGCAAGCTGCGGGT ACGCGATTCCAACGTCTCAACCGCATCGCAACAAGAGACTGCCGCCGCCG CCGCCGCCGCCGCCGCCACCGATCGTGGCAAGCGACAGAGGACAGCAGTA GGGAAGAAGGATAGCGGTGGTGCTGCTGCTGTGCCGCCATCAGCGCAAGA TGAGGCAGAAGTAGACAAGGAGAATCAGCCCGCCGCCGCTGTTGCCAAGG GAAGGGGTCGCCCTCCCCTCCCCAAACGCAAGAAGCTTGGCGGTGGTACC GCTAACCCTGCCGATGCGGACGGGTCTGGGCCGAAGGCTGAGCCCGTGAG GAGATCCGGGCGTAACTCCGGCCTTCCGCCCGAGCCGACCGAAGGCAGTC GCCCGCGTGGCGGCAGCATCGCCCGGGCGCCCAACAGCAGCCGCGGCGGC GGCTGCTGCACCCAGAACAAGTGCGAAACAGGGGACAACGGCGACAGCAG CAGCAGCGGTGATGTCGCCGCCGCGGAGATCGCTGAGCTCCGCGCCATCA AGGTTTCGTCAATGAAGGTCGTGGACCTCAGGGCAGCGTTGCGAAAGCTG GGATCGTCGGCTGGGGGGCTCAAGGCGGTGCTCCAGGTCAGGCTCGAAGA GACCATCGCCGCGCGCGTCTCCGAACTCGAGACCCCCCCGCAGACTATCG AAGGCGACCAGGAAGAGCGAGAACAAGAAGAACAACGGGATGCCCCAGCA GCGGGCGCTGCAGCAAGGTCCGAGGACGCAAGTACTATCTCGGGGCTGCC ATCCACCAGGTCGTCGGTTGCACCGGGGGCTGCTCTAGGGCCGCTCACCC GCCTCTCGATGCCACGGTTATCGGCAGAGTCGGTCACGGTCCCCTCACCC GTGCGCGCCTCGCCGTTCTTCGGGAACGACTCGGAGCAGCAGCAGCAGCA GCAGCAGCAGCAGGCGTCTACCGCCGTAGCGGTGGCAGCAGCCGCCGCGG TTGGTGTTGGGGGCGCTCTGGAAGGCGCCTCCGGTGCTCCTGAGAGTGGC GGTGGAGGTGATGGTGATCACGGCGTTGAAGATCTGATGGATATCGACTC GGAAAAGCTTGAGAGCGATGATGACAGCGGGGACGACATCGAGGGGATGG AAACGGACACTTCGAAGATAGACCAGCGTGGAGTTCCGGTAGGGGAGGCG GCGGCAGCAAGATCAGCACGGGAGGAAGACGTTCCCAAGACTGGTGCGTC GGGTGATATGGAGGAAAGCGAGGGGGAGGGTGGTGCCGACCCGCCGTTGT CGCCGGTGCCGGATGCTGGGTCAGGAGTACCTGCTAGGGCTGCAGCCGCC GACAGCGATACGCTTCCTGTCGCCGAAGACGTGACGGAGATTGTTCCGGA GGTCACCCCGGTCGACGTTTCCAGCAACATGGTGGACGAGGAAGACGAGG AAGAGGCGGAAGAGGGAGAGGTGGTGCTGACAGCAGAGGACAGGAAGGGC CTTGCTGATGAAGCTGCTCCGGAGGAGAGCGGGTCGCCGAGCGGGACTGC TGTGGAAGGCGGAGCAAAGGTAGAGTGCGAGGCGGCGGGGGCCGGGGATG TCTCGGCGAAGGGTATGGCGGTGGAGGAGGAGAGGCCGAGCGGAGAGGCG GCCATGGAGGATGAGATGGACGTTGAAGAGCCCAGGAGCGAAGAAGGAAC TCCGAAAGACATCTTCGCGCCCCCCGCGCTGGAGGACAAGCCGGTCGGGT ACGGCAGTGTTAGCAGCAGCAGCGGCACACAGAGCTTCCCTTGCAAGACT CCCGGTAGCGCGGCAGTCTCTAGGTCGTCGACTTCTCTCCTCAGCTCCGG CGGAAGCTCGATCACGAACCTTCCCAGGAACGACTCGGGCGTAGGGCCCG CAGGGGGTAGCGGTGGCGACATCGTCGGCGGGAAGCGCGCTCGTCCTATC GCGGCCCAAGAAACGCCGGGCAGCGCGGCCGGCTCTGCTGTCTCCTCGAG CGTCGGCCGGAGCGGCGGCGGCGGCGGCGGGGGAGGCGGCAAGAGGCCCA AGACCGGCAAGGAGAAGGTCAGCCTACAGGAGATCATGTCCCAGATGAGA AAGACGTACGCGAAGAAAGGCGGCACTCCCGGCGCGGCGTCCAAGGCGGG TAACGCAGGAGCCCGCAAGGCGGCCGCTGATTTCACGGCGACTCGGAAGC CCGAGGTGGCGGCAGCGACAGCACCGGCGGCGGTGCCGGTGGCGGCAGCT GTCCCCTCGACCCCGGTCTCGAAATCGGACGCGCGGAGCGAGGCGGCGGT GGTAGCGGCGGCGGAAGCGCCTCCCGCCCCCGCCGCCACCGGGTCCACCT CGGCCGAGCCCGCTGCGCCGTCGGCGGCGGCGGCGGCGGCGGCCGGCAAG CCCTCGAACTTGATCACCACCCTCCACTCTTTCACGTCCGTGCTGTCCAA GAAGAACGCAGCCGCGGCCGCCGCCGCGCCCCTCGGCAAGTGGGACCGGC TCGCCGCCGGCACCGGCGCTAGCTCGAACGCCCGCACGGTGCCGGCGCTA CGGAAGGCCGAAGAGGCAAGGCTCCTCGAGGAGAGGCGCGCGCGGGAGCG GGCGACGTCGCGGGTGAGAACGCAGGCGGGGGGGGGAGCAACGGTGGCAG CTGCTGCCGGAAAGCAGCAGCTGGAGCAGCTGCACGCCGCGTCTGCTTCT GCGGCACGTAGTCAGGGCGAGCGTGTGACGCCTGGCGGGGCAATGGCGAG GGTGGGGGCCGCGAAGGCCTTCTCCACGCAGGCAGCGGCGGCGGGATCGA AATCGGCGGGAGTTCCAGACGGAAAGGCAGTGTCTTCGGCAGGCACCGGT GGTGCTCCTTCCCAGCCGCATCTTGCCCCCCTGCGTGTCACCGGCATGCT GTCCAAGCTTGTGCCGGGGGGCGTGGCCGGACCAGTGGGGTTGGGGACGG AGGAAACAGCGTTGCCCCCGTCAAGCAGGAAGGTGTCCGACTTGTCTTCG TCCGACCTGCCGGAGCCGTTCCGTCGTTCAGAAGACCTGTTCGTCGGAGG GGCGGCTGCTGCGGCGGCGGCAGCGGCGGTGGCGGATTGCGACAACGCTA GCGTTAGGTCCGCCGGCAGTACGTCTTCGTCTTGCTTTTCCATGGGGGTT AGCTCCACGGCGGGCGGGCGGCCCAGCAGTACCGTGTCCTCTTCGGAGCG CGTCGAGAAGAAGATCAGGGACCAGCGCGCCAAGATCGCGCTCAAGCGTC AGGCTCGCATGGAGAAGATTAAGGCGGAGGAGGCGAGGAAGAAGGCCGAG CTCGAGACCAAGGAGCTGCGAGACGCGGCCCGCCTGGAAGCCTCCCGCCG CGCCAAGCAGGAGGCGGAGGCGAGGTTGCGCGAGCAGAAGGCGCAGCGGC AGGCGGAGGTGGAGCATCGTCGCGAGCAGGAGAGGGCCGACAAGGAGGCG AAGGATGCCAGGGAGCGACAGGAGAAGGAGGCCAGGAGACTTGCGGCCAT GGAAGAGGCTAAGGCTAAGGCGGCGCAAGAGGGGGCCGCTATCAAGGCGC AACAGGCGAGGAAACTCGAGCCCGCCGCCGTCGCCGCTGTCGCCGCACCG GCCGCCGCCTCGACAATCGCTGGAGCCACCGCTGCGGAAGGGAAGCCGGT GGCAGTTCTCAAGCGGGTTTCCCCAGCTGCTGCTCCCGCTTCTTCGACC back to top
|