prot_Ecto-sp13_S_contig8386.19753.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8386.19753.1
Unique Nameprot_Ecto-sp13_S_contig8386.19753.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length865
Homology
BLAST of mRNA_Ecto-sp13_S_contig8386.19753.1 vs. uniprot
Match: A0A6H5KMM5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM5_9PHAE)

HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0
Identity = 664/799 (83.10%), Postives = 681/799 (85.23%), Query Frame = 0
Query:   72 MTSEEDKSHAPSGGGAPVLDTSWIDDSAVVAVASGGDXXXXXXXXXXXXXXSRRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNTDAAVTSPGADSAAAFSVPALPSGSTASPDTDLPDPTAVADLFEAEEGTTLASRPSPLGTLNNNETKPSSSSAPKKKSEGKQEPLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTATISPRTMDGEVVGAAEEQASGLSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSIVMPYEAQPVMDSDLGDGHAEDETANMPPXXXXXXTGGDXXXXXXXXXXXXXXK-PSRGSTSTTNSPGDELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAVPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLEEDEPRLVSQPVRRESKEQKRGLVLRIK---PLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARRVATAXXXXXXXXXXXX-ACLETAVDGMMPGVEKRASSSVKGIAISVACTSPTRAEAASKSRRDGEGLVADPATGACATASGVSVGESAAEKESLPPGAAPGGGVDNNGDTPLKKIEGGGAVVATGDGEARDDVSGGEEADVLTMTEGITQEASPEAAAETPQTITPGEGVCVGATAAVVKNAAAIETLVSSNEAAVVDGAGEEEVMAGALVR 865
            M SEEDKS+AP+GGGAPVLDTSWIDDSAVVAVA GGD              +RRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSS G XXXXX                             QR+TDAAVTSPGADSAAA SVPA PSGSTASPDTDLPDPTAVADLFEAEEGTTLASRPSPLGTLNNNETKPSSSSAPKKKSEGKQ+PLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAA APTAT SPRTMDGEVVGA EEQASGLST                   XXXXXXXXXXXXXXXXXXXX RSIVMP EAQP+MDSDLG+ HAE ET NMPPXXXXXX    XXXXXXXXXXXXXX  PS+GSTSTTNSP DELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGA PGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLE DEPRLVSQPVRRESKEQKRGLVLRIK   PLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYK PYLRHVRDVRASRVREFAAA      XXXXXXXXXXXX AC ETAVDGMMPGVEKRASSSVKG AISVAC SPTRAEAASKSRR+GEGLVADPAT A A AS V+VGE AA KESLPPGAA   GVDNNGDTP KKI+GGGAVVA G+GEARDDVSGGEEADVLT+TEG TQEASPEAAAETP+T+T GE + VG TAAV KNAAAIETLVSSNEAAVVDGAGEE+ MA ALVR
Sbjct:    1 MASEEDKSNAPNGGGAPVLDTSWIDDSAVVAVAYGGDSGGVTRGRGGGKRRTRRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGGDXXXXXNHQKSRSPSSHDQEFGGGLAEVTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTLASRPSPLGTLNNNETKPSSSSAPKKKSEGKQDPLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAARAPTATRSPRTMDGEVVGAVEEQASGLSTAIAAAATRPGDGEETQKRVXXXXXXXXXXXXXXXXXXXX-RSIVMPCEAQPLMDSDLGEDHAEAETPNMPPXXXXXXXXXXXXXXXXXXXXXXXXXXPSQGSTSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLEGDEPRLVSQPVRRESKEQKRGLVLRIKVGDPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKVPYLRHVRDVRASRVREFAAAXXXXXXXXXXXXXXXXXXXACRETAVDGMMPGVEKRASSSVKGTAISVACISPTRAEAASKSRRNGEGLVADPATDAFAAASRVTVGELAAAKESLPPGAAS-WGVDNNGDTPSKKIDGGGAVVAIGEGEARDDVSGGEEADVLTITEGTTQEASPEAAAETPRTVTSGERLYVGVTAAVAKNAAAIETLVSSNEAAVVDGAGEEKAMAEALVR 797          
BLAST of mRNA_Ecto-sp13_S_contig8386.19753.1 vs. uniprot
Match: D8LM31_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM31_ECTSI)

HSP 1 Score: 987 bits (2551), Expect = 0.000e+0
Identity = 679/797 (85.19%), Postives = 691/797 (86.70%), Query Frame = 0
Query:   72 MTSEEDKSHAPSGGGAPVLDTSWIDDSAVVAVASGGDXXXXXXXXXXXXXXSRRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNTDAAVTSPGADSAAAFSVPALPSGSTASPDTDLPDPTAVADLFEAEEGTTLASRPSPLGTLNNNETKPSSSSAPKKKSEGKQEPLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTATISPRTMDGEVVGAAEEQASGLSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSIVMPYEAQPVMDSDLGDGHAE---DETANMPPXXXXXXTGGDXXXXXXXXXXXXXXKPSRGSTSTTNSPGDELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAVPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLEEDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARRVATAXXXXXXXXXXXXACLETAVDGMMPGVEKRASSSVKGIAISVACTSPTRAEAASKSRRDGEGLVADPATGACATASGVSVGESAAEKESLPPGAAPGGGVDNNGDTPLKKIEGGGAVVATGDGEARDDVSGGEEADVLTMTEGITQEASPEAAAETPQTITPGEGVCVGATAAVVKNAAAIETLVSSNEAAVVDGAGEEEVMAGALVR 865
            M SEEDK HAP+GGG  VLDTSWID+SAVVAV     XXXXXXXXXXXXXX  RRTLSPSIGKHNYMSNVDLNDPMKYPSLPSS  XXXXXXXXXXXXXXXXXXXXXXXXXX         QR+TDAAVTSPGADSAAA SVPA PSGSTASPDTDLPDPTAVADLFEAEEGTT A RPSPLGTLNNNETKPSSSSAPKKKSEGKQEP GQASSAAVARGR SRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTAT SPR MDGEVVGAAEEQASGLST                    XXXXXXXXXXXXXXXXXXX RSIVMP EAQP+MDSDLGDGHAE           XXXXXX    XXXXXXXXXXXXXXKPSRG+TSTTNSP DELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGA PGSQRARRVAARLFCLTGYALSAVAPEDARVLCE AGDSMEWGLE DEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAAR      XXXXXXXXXXXAC ETAVDGMMPGVEK ASSSVKG AISVACTSPTRAEAASKSRRDGEGLVADPAT A   ASGV+V ES  EKESL PGAA GGGVDNNGDTP KKI+GGGAVVA  +GEARDD SG EEADVL MT+GITQE SPEAAAETP+TITPGEG  VG TAAV  NAA IETLV S+EAAVVDGAG+EE MA AL R
Sbjct:    1 MASEEDKRHAPNGGGTLVLDTSWIDNSAVVAVXXXXXXXXXXXXXXXXXXXXXRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXELTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAPRPSPLGTLNNNETKPSSSSAPKKKSEGKQEPRGQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXX-RSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSRGNTSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEGDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARXXXX--XXXXXXXXXXXACPETAVDGMMPGVEKSASSSVKGTAISVACTSPTRAEAASKSRRDGEGLVADPATDAFPAASGVTVEESPTEKESLLPGAALGGGVDNNGDTPSKKIDGGGAVVAVEEGEARDDASGAEEADVLAMTDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPSDEAAVVDGAGQEEAMAEALGR 794          
BLAST of mRNA_Ecto-sp13_S_contig8386.19753.1 vs. uniprot
Match: A0A835Z9P5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.480e-14
Identity = 65/166 (39.16%), Postives = 92/166 (55.42%), Query Frame = 0
Query:  501 LFRAFYGAVPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGD--------SMEWGLE--EDEP------RLVSQP--VRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDG-FCYEDR-ETGEPVEPGAYKGPYLRHVRDVRASRV 646
            L R +  A PG QRARR+AAR++CL+GY LSAVA  DA +LC A           +++W  +   D+P      RL + P  +R  S  QKR LVLR++P+ + M+ +   E+   E+ATG+   +A  DG + Y D    G  V P  Y   YL+H+  VRA R+
Sbjct:  328 LCREYAAATPGGQRARRIAARVYCLSGYPLSAVAATDAELLCAARXXXXXXXXXAALDWPTDPRRDDPAAPPLPRLDALPAAMRGASNAQKRALVLRLRPVLERMEASGSVERAALEAATGLACERA--DGMYRYRDGGRAGRIVAPALYAERYLQHLAAVRAERL 491          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8386.19753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KMM5_9PHAE0.000e+083.10RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LM31_ECTSI0.000e+085.19RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z9P5_9STRA1.480e-1439.16RING-type domain-containing protein n=1 Tax=Tribon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8386contigEcto-sp13_S_contig8386:402..4293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8386.19753.1mRNA_Ecto-sp13_S_contig8386.19753.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8386 402..4293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8386.19753.1 ID=prot_Ecto-sp13_S_contig8386.19753.1|Name=mRNA_Ecto-sp13_S_contig8386.19753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=865bp
AARLANRGCILRRKTPRYSTVGHFRHNQWEERQRVSTGCLTPEVCKNSTG
VSMQKLVPSAEEASHSQGYICMTSEEDKSHAPSGGGAPVLDTSWIDDSAV
VAVASGGDSGGVTRGRGGGKRRSRRRTLSPSIGKHNYMSNVDLNDPMKYP
SLPSSSGDDGGSSNHQKSRNPSSHDQEIGGGSAELTTLRPPPQRNTDAAV
TSPGADSAAAFSVPALPSGSTASPDTDLPDPTAVADLFEAEEGTTLASRP
SPLGTLNNNETKPSSSSAPKKKSEGKQEPLGQASSAAVARGRRSRRATFG
GADARIRLEAENLAPVLPSKPPNPVPAAPAPTATISPRTMDGEVVGAAEE
QASGLSTAAAAAATRPGDGEETQERVPPPPPPPAAATKKSRSRSSRRRSI
VMPYEAQPVMDSDLGDGHAEDETANMPPPPAPPATGGDGTATAAAATADG
DGKPSRGSTSTTNSPGDELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKR
LFRAFYGAVPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSME
WGLEEDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAES
ATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFA
AARRVATASAAAAAAVSSSSACLETAVDGMMPGVEKRASSSVKGIAISVA
CTSPTRAEAASKSRRDGEGLVADPATGACATASGVSVGESAAEKESLPPG
AAPGGGVDNNGDTPLKKIEGGGAVVATGDGEARDDVSGGEEADVLTMTEG
ITQEASPEAAAETPQTITPGEGVCVGATAAVVKNAAAIETLVSSNEAAVV
DGAGEEEVMAGALVR
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