prot_Ecto-sp13_S_contig83731.19740.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig83731.19740.1
Unique Nameprot_Ecto-sp13_S_contig83731.19740.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
BLAST of mRNA_Ecto-sp13_S_contig83731.19740.1 vs. uniprot
Match: UPI001872F083 (type I secretion C-terminal target domain-containing protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872F083)

HSP 1 Score: 119 bits (298), Expect = 1.110e-28
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 0
Query:   27 VQHELAEETPGATGNHYDGGRGTDTLRLFLTTAEAEDAGISAAVASLQSFIAANSDPASLSGSGLLGSFAALGLEVRNFEDLEIFIDGVQQGPTAD 122
            V H L+EET GA GNHYDGG GTD L L LT AEA +A I+ AV  L +FI ANSDP+S+SGSG LG+F  LGLEVRNFEDLE+ +DGV   P AD
Sbjct: 3429 VVHTLSEETTGAAGNHYDGGHGTDKLVLNLTAAEAANATIAQAVQDLAAFIGANSDPSSISGSGALGAFTTLGLEVRNFEDLEVLVDGVPISPNAD 3524          
BLAST of mRNA_Ecto-sp13_S_contig83731.19740.1 vs. uniprot
Match: A0A7X2KG62_9PROT (DUF642 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2KG62_9PROT)

HSP 1 Score: 67.8 bits (164), Expect = 1.260e-10
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   37 GATGNHYDGGRGTDTLRLFLTTAEAEDAGISAAVASLQSFIAANSDPASLSGSGLLGSFAALGLEVRNFEDLEIFIDGVQQ 117
            GATG  YDGG G+DT R+ L+  +A+D  +   + S + F+ AN D    +G G L +F+ LG+ VRN+E+LE+++DG  Q
Sbjct: 2438 GATGGLYDGGAGSDTFRIELSGDQADDDAVLTELRSFREFMEANDDENRDTGQGSLFTFSTLGVSVRNWEELEVYVDGQAQ 2518          
BLAST of mRNA_Ecto-sp13_S_contig83731.19740.1 vs. uniprot
Match: A0A6B2NM53_9RHOB (Tandem-95 repeat protein n=1 Tax=Ruegeria sp. PrR005 TaxID=2706882 RepID=A0A6B2NM53_9RHOB)

HSP 1 Score: 61.6 bits (148), Expect = 1.730e-8
Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   41 NHYDGGRGTDTLRLFLTTAEAEDAGISAAVASLQSFIAANSDPASLSGSGLLGSFAALGLEVRNFEDLEIFIDGVQQGPTADIVLTTD 128
            ++Y GG G DTL L +T ++     +   +A+  +F+AAN+DP +   +G    FAA GL  R FED+ +F+DGV+  P  D V   D
Sbjct:  136 DYYAGGSGIDTLTLTMTLSDWFRIEVQNDIAAFLNFVAANTDPLTGEANGQGFDFAAFGLTAREFEDMRVFVDGVELSPEDDPVTAND 223          
BLAST of mRNA_Ecto-sp13_S_contig83731.19740.1 vs. uniprot
Match: A0A8E1WXL7_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=A0A8E1WXL7_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 3.620e-6
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0
Query:   29 HELAEETPGATGNHYDGGRGTDTLRLFLTTAEAEDAGISAAVASLQSFIAANSDPASLSGSGLLGSFAALGLEVRNFEDLEIFIDG 114
            + LAE T     N+YDGG G DTLRL LT AEA  A I A +A+ + F+A     A ++ + +   F++  L VRN+E LE+ ++G
Sbjct:   87 YRLAENT--GYSNYYDGGTGNDTLRLVLTRAEANSAEILADLAAFEEFLA-QGQQADVASNDVF-HFSSFDLTVRNWERLEVVVEG 168          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83731.19740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI001872F0831.110e-2865.63type I secretion C-terminal target domain-containi... [more]
A0A7X2KG62_9PROT1.260e-1043.21DUF642 domain-containing protein n=1 Tax=Alphaprot... [more]
A0A6B2NM53_9RHOB1.730e-838.64Tandem-95 repeat protein n=1 Tax=Ruegeria sp. PrR0... [more]
A0A8E1WXL7_9PROT3.620e-641.86Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00313CABNDNGRPTcoord: 45..53
score: 57.45
coord: 8..19
score: 37.4
coord: 20..28
score: 54.74
IPR011049Serralysin-like metalloprotease, C-terminalGENE3D2.150.10.10coord: 1..126
e-value: 5.2E-9
score: 38.5
IPR011049Serralysin-like metalloprotease, C-terminalSUPERFAMILY51120beta-Rollcoord: 3..54
IPR001343RTX calcium-binding nonapeptide repeatPFAMPF00353HemolysinCabindcoord: 4..27
e-value: 1.6E-8
score: 34.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig83731contigEcto-sp13_S_contig83731:188..571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig83731.19740.1mRNA_Ecto-sp13_S_contig83731.19740.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig83731 167..571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig83731.19740.1 ID=prot_Ecto-sp13_S_contig83731.19740.1|Name=mRNA_Ecto-sp13_S_contig83731.19740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MAQAGDDTVIGEAGDDVIYGGDGDDVVQHELAEETPGATGNHYDGGRGTD
TLRLFLTTAEAEDAGISAAVASLQSFIAANSDPASLSGSGLLGSFAALGL
EVRNFEDLEIFIDGVQQGPTADIVLTTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011049Serralysin-like_metalloprot_C
IPR001343Hemolysn_Ca-bd