mRNA_Ecto-sp13_S_contig1238.1974.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1238.1974.1
Unique NamemRNA_Ecto-sp13_S_contig1238.1974.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: D7G823_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G823_ECTSI)

HSP 1 Score: 929 bits (2402), Expect = 0.000e+0
Identity = 489/511 (95.69%), Postives = 492/511 (96.28%), Query Frame = 1
Query:    1 KAWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREGTGADTHFVEAFYASDARGWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHFRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEEAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSHVAAAADTAVXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGG-EAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPDEEDSEDLAAVAVEEENPGMTLSYALADVDIM 1530
            +AWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREG GADTHFVEAFYASDARGWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHFRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEE AAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGS VA AADTAV   XXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAA GNGN    XXXXXX      EAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASP VLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPDEEDSEDLAAVAVEEENPGMTLS+ALADVDI+
Sbjct:   19 EAWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREGAGADTHFVEAFYASDARGWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHFRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEAAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSRVAPAADTAVTSAXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGGNGNDXXXXXXXXXXXXXXXEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPLVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPDEEDSEDLAAVAVEEENPGMTLSFALADVDII 529          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE)

HSP 1 Score: 932 bits (2408), Expect = 1.760e-302
Identity = 491/512 (95.90%), Postives = 494/512 (96.48%), Query Frame = 1
Query:    1 KAWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREGTGADTHFVEAFYASDARGWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHFRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEEAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSHVAAAADTAVXXXXXXXXXXXXXXXX--ADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPDEEDSEDLAAVAVEEENPGMTLSYALADVDIM 1530
            +AWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREG GADTHFVEAFYASDAR WLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIH RGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEE AAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELA HRGSHVAA      XXXXXXXXXXXXXXXX  ADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAA  NGNGNYA XXXX GHSGGEAAAKRRGRNTSVTAIKRLLPTANGQE+QQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPD+E SEDLAAVAVEEENPGMTLSYALADVDIM
Sbjct: 3446 EAWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREGAGADTHFVEAFYASDARDWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHLRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEAAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELAFHRGSHVAAXXXXXXXXXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGSNGNGNYAAXXXX-GHSGGEAAAKRRGRNTSVTAIKRLLPTANGQENQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPDQEHSEDLAAVAVEEENPGMTLSYALADVDIM 3956          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A836C890_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C890_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.230e-35
Identity = 97/269 (36.06%), Postives = 135/269 (50.19%), Query Frame = 1
Query:  745 DAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDK-------------------------GSSWFVNVRFSLRFVMVSVSDPVPDEEDSEDLAAVAVE 1476
            D Y  C+FEHL RNAL RRLRLPHRF ALV V+L  LKNLSPH+     DVFA   L+R                       +   A+ K     ++VT   R++P A  +  +Q  WG    FR+ LPE+A P +   G  +   VM     GG  + GPP  +++AV++K  L+D  LG  +VPL  L+    +DEW  L+  K                         GSSWF+N+R +LRFV++ V++P P+EE  +   A+A +
Sbjct:   22 DPYSSCLFEHLARNALLRRLRLPHRFLALVQVELHDLKNLSPHFQAQPMDVFAVARLQR----------------------GASAPASHKHPTLGSAVTDAHRVVPCAEAKAGRQ--WGGATIFRYALPEDALPLIDVSGALSAPAVMRRHPAGG--APGPPSVLQLAVFKKSLLSDDCLGGTEVPLHSLNAHTTLDEWYPLKHVKHKRWGKVGAEGGAGGTWGAGFTXGAGSSWFLNLRITLRFVVMLVAEP-PEEEGLDAEVAIAAD 263          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A7S3Y602_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y602_HETAK)

HSP 1 Score: 144 bits (363), Expect = 3.460e-35
Identity = 95/305 (31.15%), Postives = 144/305 (47.21%), Query Frame = 1
Query:  511 WTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSHVAAAADTAVXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSD 1425
            W  L  E WL++ VA A +P + R  LA                                     P SLH        D Y  C   HL R+ LF RLR+PHR+ ALV  +LL LK L+P   PAK +V+A + L+R   +  + N                     K R  ++ +T  ++++  ++   S+ + WG KAAFRFPLPE    ++   G   Y   +         ++G P+ + I V+ K F+ D  LG+V++PL  + D   +DEW+ LR +KG+SWF++V+  LRFV++S+ D
Sbjct:   13 WAALRGESWLLQAVASAGYPTAARGDLAA------------------------------------PGSLHG------LDPYAACAARHLYRSLLFARLRMPHRYLALVQAELLDLKKLAPTPSPAKMEVYAVLRLQRRGSSVVLSN---------------------KTRTLDSVMTQPEKIVTDSS---SRSTPWGGKAAFRFPLPEA---YLRLDGPADYRQAV---------NRGAPKVLHICVYSKHFIMDSCLGDVEIPLTAITDNNHLDEWLPLRCEKGTSWFLHVKLRLRFVLMSIVD 239          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: B8CG37_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG37_THAPS)

HSP 1 Score: 108 bits (271), Expect = 2.010e-20
Identity = 111/439 (25.28%), Postives = 174/439 (39.64%), Query Frame = 1
Query:   85 ASVPLHAVREGTGADTHFVEAFYASDARGWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAE----RGGSQIHFRGGRHHGDALLRFVDRWDVE----HCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEEAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSHVAAAADTAVXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALR-GDKGSSW 1374
            + V    +R G   ++  V  F   DA  WL  +        A +R+R  E + +++ +T ++    +G +  H         +  RFVD W+VE      GE+A AAL  G    +S  L+              +++ A G      LW+ +     L + +  A                   H A   D                    DL      G    E   Y   + +HL  N+LFRRL+LP RF AL+ V+LL LKN++     +    +A + LKR   +A + +                     K R  +++ T   R +   +G  +  S WG+   FRFPLPE+ +    ++      L            +GPP C+++ V+ K+F++D  LG  DV L  L   G I+EWV LR G  G +W
Sbjct: 3059 SGVDFRTLRVGEPGNSVIVVLFNKQDAIKWLVANETGNDETEALERLRVMELLRVIEPITSSDLSLPKGYAATHPST-----SSQYRFVDPWEVEALESKAGETASAALGRGKYHTLSVGLIAAACE---------KIVRASGGLHLLGLWSTMKGGISLTKALCSA-------------------HPAWERDAG-----------------GDLQMK---GGFLMEPSPYENSIRQHLYGNSLFRRLKLPQRFLALIQVELLDLKNVTSPSGTSSLTAYALLRLKRQGSSAPLNH---------------------KARSLDSACTQA-RKISKISGPNAPAS-WGSLVRFRFPLPEDVNCEGKSFDSDRESLF-----------KGPPTCLQVTVYEKKFMSDVELGGADVNLESLGSGGQIEEWVPLRVGKDGITW 3410          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A7S3JT43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT43_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.930e-17
Identity = 106/400 (26.50%), Postives = 170/400 (42.50%), Query Frame = 1
Query:  319 DALLRFVDRWDVEHCGESAGAAL-RAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEEAAEL---WTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSHVAAAADTAVXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLS---------PHYHPAKT------DVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDG--AYELVMGGTGKGGMGSQGPPRCVRIAVWR---KQFLA-------DQRLGEVDVPLGKLDDRGDIDEWVALRGD-KGSSWFVNVRFSLRFVMVSVS 1422
            D  LRFVD W+VE   +   +AL R+  LGR+ Y+ +             GE ++    ++  +L   W  L  E WL   +A+   P S R    E  S     ++ A  +                  A      + G   P R      +  +L RNA++RR ++P RF AL+ ++L+ L+N++         P  H A +          A ++ RL  +   G G             +      K R R+++V   KR     +      + WG  A FRF LP+EA P      D   + +L    +    + ++GPP+ V I V++      LA       +  LG+V++PL  L D   + +W+ LR    GSSWFV V+ SLRF+++++S
Sbjct:  894 DEHLRFVDAWEVEPIDDDDQSALTRSTILGRLLYEPLQ---------VDKGEDVFLYCHDQQNDLRSPWAALRCEAWLTTAIAQT-LPPSIRQGEDECTSGNDPALSDACSS------------WPPPPAAAAFTDSYLGTSEPFRSR----LRRYLYRNAMYRRNKMPRRFIALIQIELVALENIADSLGGTPGTPREHVAHSGGKTSHSTSDAYAVLRLKHSRPAGGG-------------ASPPLTEKVRTRDSAVA--KRREHLDDRHHHGDNYWGVSATFRFALPDEALPPEETSQDNELSKQLFTQISSTERLPTRGPPQAVHICVYQPLSNPILASIGLAPTENYLGDVEIPLAALTDDQPLQQWLPLRASGSGSSWFVKVKISLRFLLMAIS 1252          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A7S3V8S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8S0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.340e-16
Identity = 71/218 (32.57%), Postives = 106/218 (48.62%), Query Frame = 1
Query:  769 EHLCRNALFRRLRLPHRFQALVSVQLLGLKNL-SPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNT-SVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGS-SWFVNVRFSLRFVMV 1413
            +HL RNALFRRLRLP RF A + V++L LKNL SP   P+ T    A +L RL   A+                     A    + R   SV+   + +   +G  +  S WG+   FRFPLPE  +   +++ D   E +           +G P  ++I+ + K+F+ +  LG  D+ L  L   G ++EWV LR      +WFV +R +LRF ++
Sbjct:  892 QHLYRNALFRRLRLPQRFLAFIQVEILDLKNLTSPGGSPSVT----AYALLRLKRDAS--------------------NAPLTHKARTLDSVSTDPKKISRGSGPNAPAS-WGSVVRFRFPLPEGVNCDGVSF-DSDREALF----------KGAPSVLQISAYEKKFMTNSSLGGADIHLDALSTSGQLEEWVPLRSINDEITWFVRLRLTLRFELM 1073          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A7S3V901_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V901_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.880e-16
Identity = 71/218 (32.57%), Postives = 106/218 (48.62%), Query Frame = 1
Query:  769 EHLCRNALFRRLRLPHRFQALVSVQLLGLKNL-SPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAAKRRGRNT-SVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGS-SWFVNVRFSLRFVMV 1413
            +HL RNALFRRLRLP RF A + V++L LKNL SP   P+ T    A +L RL   A+                     A    + R   SV+   + +   +G  +  S WG+   FRFPLPE  +   +++ D   E +           +G P  ++I+ + K+F+ +  LG  D+ L  L   G ++EWV LR      +WFV +R +LRF ++
Sbjct: 1863 QHLYRNALFRRLRLPQRFLAFIQVEILDLKNLTSPGGSPSVT----AYALLRLKRDAS--------------------NAPLTHKARTLDSVSTDPKKISRGSGPNAPAS-WGSVVRFRFPLPEGVNCDGVSF-DSDREALF----------KGAPSVLQISAYEKKFMTNSSLGGADIHLDALSTSGQLEEWVPLRSINDEITWFVRLRLTLRFELM 2044          
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Match: A0A8J2WZR4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZR4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.660e-10
Identity = 69/244 (28.28%), Postives = 104/244 (42.62%), Query Frame = 1
Query:  775 LCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNGNYAXXXXXXGHSGGEAAA-----KRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLA---------DQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSD--------PVPDE 1440
            L RNA FRR  L  RF A V V L  L+ ++    P   +  AA + +R          +  +A          G  A      K R R++ +   +  +    G     + WGA AAFRF LP+EA P   +                 + ++GPP    + V+R++  A         +  LG+V+VPL  L +   + +W+ L G KG  WF+ VR +L FV+  ++D        P PDE
Sbjct: 1778 LLRNAWFRRHGLKRRFSASVRVDLEALETMAGALSPGAAE--AAQAAQRAPPV------DDAFAVLRLRHARPKGSQAPPPLSEKLRTRDSCIAKRRGKVHVGGG-----ATWGAAAAFRFALPDEALPPQNSVR---------------LPTRGPPTVAYVCVYRREKHALAALGVPAQETYLGDVEVPLDNLTEDQPLTQWLPLNGGKGQHWFLRVRVTLAFVLCELADAPASVSPMPTPDE 1993          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1238.1974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G823_ECTSI0.000e+095.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K928_9PHAE1.760e-30295.90PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836C890_9STRA3.230e-3536.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y602_HETAK3.460e-3531.15Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
B8CG37_THAPS2.010e-2025.28Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3JT43_9STRA1.930e-1726.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3V8S0_9STRA6.340e-1632.57Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3V901_9STRA7.880e-1632.57Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
A0A8J2WZR4_9STRA1.660e-1028.28Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1238contigEcto-sp13_S_contig1238:13591..18179 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score112.5
Seed ortholog evalue5.8e-22
Seed eggNOG ortholog2850.Phatr49814
Model size2344
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.RAVE protein 1 C terminal
EggNOG OGs2XA4N@2836,KOG1064@1,KOG1064@2759
Ec32 ortholog descriptionC2 domain
Ec32 orthologEc-06_009880.1
Cds size1476
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1238.1974.1prot_Ecto-sp13_S_contig1238.1974.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1238 14402..18122 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462658.4663215-UTR-Ecto-sp13_S_contig1238:13590..144011681462658.4663215-UTR-Ecto-sp13_S_contig1238:13590..14401Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1238 13591..14401 -
1681462658.5405142-UTR-Ecto-sp13_S_contig1238:18122..181791681462658.5405142-UTR-Ecto-sp13_S_contig1238:18122..18179Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1238 18123..18179 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462658.4771464-CDS-Ecto-sp13_S_contig1238:14401..145611681462658.4771464-CDS-Ecto-sp13_S_contig1238:14401..14561Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1238 14402..14561 -
1681462658.4870346-CDS-Ecto-sp13_S_contig1238:14859..154501681462658.4870346-CDS-Ecto-sp13_S_contig1238:14859..15450Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1238 14860..15450 -
1681462658.4990017-CDS-Ecto-sp13_S_contig1238:16090..163151681462658.4990017-CDS-Ecto-sp13_S_contig1238:16090..16315Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1238 16091..16315 -
1681462658.513671-CDS-Ecto-sp13_S_contig1238:16938..171511681462658.513671-CDS-Ecto-sp13_S_contig1238:16938..17151Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1238 16939..17151 -
1681462658.52291-CDS-Ecto-sp13_S_contig1238:17536..176131681462658.52291-CDS-Ecto-sp13_S_contig1238:17536..17613Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1238 17537..17613 -
1681462658.5309641-CDS-Ecto-sp13_S_contig1238:17912..181221681462658.5309641-CDS-Ecto-sp13_S_contig1238:17912..18122Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1238 17913..18122 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1238.1974.1

>prot_Ecto-sp13_S_contig1238.1974.1 ID=prot_Ecto-sp13_S_contig1238.1974.1|Name=mRNA_Ecto-sp13_S_contig1238.1974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=492bp
MRRPDGSALASVPLHAVREGTGADTHFVEAFYASDARGWLTRSRVDPAGP
AAGDRVRKWESMGIVQRVTKAERGGSQIHFRGGRHHGDALLRFVDRWDVE
HCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEEAAE
LWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSHVAAAADTAVTSA
AAALTPAAAAAAAADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLR
LPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAVGNGNG
NYAAAAAAAGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAK
AAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWR
KQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFV
MVSVSDPVPDEEDSEDLAAVAVEEENPGMTLSYALADVDIM*
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mRNA from alignment at Ecto-sp13_S_contig1238:13591..18179-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1238.1974.1 ID=mRNA_Ecto-sp13_S_contig1238.1974.1|Name=mRNA_Ecto-sp13_S_contig1238.1974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4589bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1238:13591..18179- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGCCTGGCCGGACGAAGACAGCGAGGAGAGGGTCGCCTACCAGCTCCT GAACGGCATGCGGAGGCCCGACGGATCTGCCCTCGCCAGCGTACCCCTCC ATGCCGTGCGGGAGGGGACCGGGGCGGACACTCACTTCGTGGAGGCGTTC TACGCTTCGGACGCCAGAGGCTGGCTGACGAGGTCACGGGTCGACCCCGC GGGTCCTGCCGCTGGGGACAGGGTGCGGAAGTGGGAGAGCATGGGCATCG TGCAGAGGGTCACGAAGGTAAGGTGGGGAGAGGGGTTGGGGGCGTGTCCT ACACAAGTGTCTCGTGCTGAGGTCGTGGTCATCATTCTTCTCCTTTGTAG GTCGGTCGGCGGGTCCGTTCTTAACCGTCAAGGTGCTTGCCTGAAGCAAA TCCGTTGTTTTCTTCAGATCCCGCGGCTTGAACTGCCGAGCCGTTGCCCC GTGTCTTGTGCGCCCTCTTGCACTGCTGCGAATAGTCACAATTCCTTGCC TTTTGTGCTACGCGGCGTGCTTGCTGTGCTTGCTATCGGACTTATTTCCG TCTTTTTCGTGTCCAGGCGGAGCGGGGGGGAAGCCAGATCCACTTTAGGG GCGGACGGCATCACGGAGACGCCCTCTTGCGATTTGTAGACAGGTTGGTT GGTTGGTCCACCAATTGCTTGGCGACGGCAGCGCTACCGCTGCGCTTTTC CTAGAGCACAGCAACAACTCCTCGTGATACACAGCGCTACTGGTGCGTTG TACTAGAGGATCACAACAAAAAACTCATCTTTCCGCTACGATAGCCCCCT CACCACTACAGCCCTGCTTGCCGTAGTTTTCAAGAGCGCCGCAACAACTC TCCCTGCCACCTCTTGCCGCCGTTATTCCCCACAGCATGACAGCGCTGCT TGCTTTCACCACAGTTTAGCCGTCGTCGCCCCACCACCTACCTTTTCTAG AGCACCACGACTAGAGTATAGAGTCCTCCTTCCTCGCCAAACAACTGCTG CACCGCGGCGTTCCACCGACGAAACAAGGTGGGACGTAGAGCACTGCGGC GAATCCGCGGGGGCTGCCCTCCGCGCCGGGCCCCTCGGACGTGTGTCCTA CCAGCTCGTGCCGGGAGGAGGGTCGGCGCCAGGCCGCGGCACGCTCCACG GAGAGCTGCTCTACGCCATCGGCGAGGAGGAAGCGGCGGAGCTCTGGACT AGGCTCGGGGCGGAGGATTGGCTGGTCAGGACGGTGGCGAGGTGTGCGAG GCTGACTTTTTTTTTCAGGAGATTGTGAATATGTACGGTCTCAGGACGGT CATTACTCGTTCTCGAGTTACTGCTGTTGTAGTCGAAGGGGATGTGTTGG GATTCTTCGCAGTGAGTGGGAGAGAAAGCGACTGGGCTTATTGTGAGTCT GTTTGAGCGTACACGCTGAGTTATTGACGTTGCTGAAACAGAGGTGGACG GCAGCAAACTCGTTTGTTTGTTGTTAGCGTTATTGATGGGCTTATTTGCG TACCGGGGCTTCTGCCGTGATGCGTACGTGCCATGCCGAGTCTGATTGTA GGCGATGTTATCTGTTGTTGCTGCTGCTGCTGCTGCTACTGTAGGTGAAA GTGTCGTTGTACAATCGACAAAGGCTTTCGATTTGTCAAACCGGGCGGAT GTTTTCCCGCCGTTAGGGTCGTCCACCCGTGACATGAGCGTCTCGCTAGG CACGGATGTGGCGGACGTTTGTGGCCTTAATGCTAATGCTAAGAAACCAA AGTTAACCCCCAAGCCTACCCCTTCTGCCATCTTTTGCCTCCCACTCGCT GGCTGCTGAATCTCCTGCCTCCACGACCGGCACCTCTACATTGACAAAAA CCTGTTCGCCACAGGGCGGAGTTCCCCTTCTCCTACCGCCACCAGCTTGC CGAGTTGGCCTCCCACCGCGGCTCGCATGTGGCGGCGGCGGCGGACACAG CGGTCACCAGCGCAGCAGCGGCGCTGACGCCGGCTGCGGCGGCAGCGGCC GCGGCCGACTTGCCGTGCTCCCTGCATGACGGCAACCGGCGACCAGAGCG AGACGCCTACTGCCTCTGCGTGTTCGAGCACCTTTGTCGGTGGGTTGTCG TCAGCCGCTTCGTGTTTTGTGTGTGTACTGAAGCGCAGTCGGACCTGAAG CACACGTGCAGACGGTGCTTTGACCGTATTGTCAAACGGACAACGTCCTT TTGGGTCGTTTTTTTTTTTTCTGGCGTGTGTCGCTAAACGGAAAAATGTG CTTTTTTGGGTGTTTCGTTGTTTGCTGTATCCCAACACAGACAATCAATG TGATTTTTTGGCTTAGTTGGGTCGCCGGAGAGTCGTGTGTGTCGTCAAGG CGAGTCAGTCCCGCGTGTTTCCTTGAAAAGAGTAGTGGTGTGTTCGGTAT TTACAACGTGTTGTCGCCCAGCCACACCTAGATCCGCCGTGCTTGGCGCC TATTTGATGAACCTGCCCGTCTACTAGGCGTTCTGTCGACTGGGTATGAC CGCTGCTGTAGCCGTAGTTGTGGAATATAAGCAAACTGGCAGGCAAAAAG AGGCAACACGTGTGCGTCCCCGAAACCGCTCAGTGAAAACTAACGAACAT CGATTCCCCCCAGGAAGATTGTGATCAGCGTTGTTGTTGTCACGCTGGTA CAGTATCCCATCGTAGGCAGCAAACTCCACTCCATCAACTACTCACGCGA CGCCCCCCCATCCCCCCCCGGCCTCCCAGGAATGCCCTGTTCCGCCGCCT GCGACTACCGCACCGCTTCCAAGCCCTGGTCAGCGTCCAGCTCCTCGGTC TCAAGAACCTGAGCCCGCACTACCACCCTGCCAAGACGGACGTCTTCGCC GCGGTAAGCCTCAAGCGCCTCGACATGACGGCGGCCGTCGGGAACGGCAA CGGCAACTACGCCGCCGCCGCCGCCGCCGCCGGCCACAGCGGCGGCGAGG CGGCGGCGAAGCGTCGCGGCCGCAACACGTCGGTGACCGCGATAAAGCGG CTGCTGCCGACGGCGAACGGGCAGGAGAGCCAACAGTCCCGCTGGGGCGC CAAGGCGGCGTTTCGGTTCCCGCTGCCGGAGGAGGCGTCGCCGTTCGTGC TGGCCTACGGGGACGGGGCTTACGAGCTCGTCATGGGCGGCACCGGGAAG GGGGGGATGGGGAGCCAGGGCCCGCCTAGGTGCGTGCGGATAGCGGTGTG GCGGAAGCAGTTCCTGGCGGACCAGCGGCTGGGGGAGGTGGACGTCCCGC TCGGGAAGCTGGACGATCGCGGGGACATCGACGAGTGGGTGGCGCTTCGA GGGGACAAAGGCTCTTCATGGTGAGAACGCTCTCTCTCGTGGACCACCAC CCCATCCCCTCATATACACCGAACTGCACGGACAAAACATGCTCGTTACA GCCAGGACTTGATAGAAATACGTACACAGCAAGCGATCGTTGTACTATGC AACAGGTTGCCTGCTAAGTGGCTCTGGCAGTAAGAAGAGCCGAGGTGTTG TGCATCAACTCGCGCAGAGGGGGGCGATATATGGATGGCCTCAACGCAGA CGTATATGAGAGGCCGGAATTTACAGTCATTCTCATCCCCGCCGCCGCTG CCCGTCTAAACTCCTCAGGTTCGTGAACGTTCGGTTCAGCTTACGGTTCG TGATGGTGAGCGTTTCAGACCCCGTCCCCGACGAGGAAGACTCGGAAGAC CTGGCGGCGGTAGCCGTGGAAGAGGAGAACCCGGGGATGACTCTGTCTTA CGCTCTCGCGGACGTCGACATCATGTAGAAGAGGCGACGTCATCGAGTGA CGTCATCGACATCATGTAGAAGAAGCGACGTCATCGAGCGACGTCATCGA CGACATCATGTACTTGTAGAGTCGACGTCATCGAGTGGCGTTGTCGTGTA GTAATAATATGCGTCCCACGGCCTCAGAAGAACGAACACCTCCCACCCAC GGTTGTTGTGACGCACGTTCGCTGAGAACTATAGAGGGACGGGCTCTCTC TCCGTTCCCGGTCGTTTGGACCATCGAACGTGCATAATACCCATTTCGAG GTTGCGCGTGTGATAATCCCGATACGGAGTTGTTTGATAGAGGTTGCCGG AGAGCGGCGGGAGGGGGCGGCGTTGGCAGTCAAAAGGGTAGTTTTGTGAT ATGGTATGTATGAAAGTTTTGTGCAGTAACACCCGGTTTTCGTGTTTTTT TGCCTCTAGAGAAGACAGAGAGAGTGGTTTGTAATGTTGGAGATAATTGA AGCCGCGCAGTTTTGTGCTTGACGGTCGTTCGTTTAGTCGTCATGGTGTG AAGTTTATGCTGTGATACTCGAACGCTATTCGCCGTCTGGAGTAACGCGC CGCAACAGCAGAGCTGGCTTGTGGACGCGGTACGAGCGCTCTCCTCCCGT AAGAGCAGAGGGAATAGATCCACGTCGAGTTTGCCGACGACTCGATCGTG TCCTCGCGGCTCCTCAAATAACGTGTCCGATTTTACGAGGGCAGCCTGTC TGTTTTCTTTCATTTTGAACAGGTCGCCACTTACCACGTCGTTCACAGCA GTTACAGTAGTTCACACCATGGATCGAAGCGAATCTGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1238:13591..18179-

>mRNA_Ecto-sp13_S_contig1238.1974.1 ID=mRNA_Ecto-sp13_S_contig1238.1974.1|Name=mRNA_Ecto-sp13_S_contig1238.1974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1238:13591..18179- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGAGGCCCGACGGATCTGCCCTCGCCAGCGTACCCCTCCATGCCGT
GCGGGAGGGGACCGGGGCGGACACTCACTTCGTGGAGGCGTTCTACGCTT
CGGACGCCAGAGGCTGGCTGACGAGGTCACGGGTCGACCCCGCGGGTCCT
GCCGCTGGGGACAGGGTGCGGAAGTGGGAGAGCATGGGCATCGTGCAGAG
GGTCACGAAGGCGGAGCGGGGGGGAAGCCAGATCCACTTTAGGGGCGGAC
GGCATCACGGAGACGCCCTCTTGCGATTTGTAGACAGGTGGGACGTAGAG
CACTGCGGCGAATCCGCGGGGGCTGCCCTCCGCGCCGGGCCCCTCGGACG
TGTGTCCTACCAGCTCGTGCCGGGAGGAGGGTCGGCGCCAGGCCGCGGCA
CGCTCCACGGAGAGCTGCTCTACGCCATCGGCGAGGAGGAAGCGGCGGAG
CTCTGGACTAGGCTCGGGGCGGAGGATTGGCTGGTCAGGACGGTGGCGAG
GGCGGAGTTCCCCTTCTCCTACCGCCACCAGCTTGCCGAGTTGGCCTCCC
ACCGCGGCTCGCATGTGGCGGCGGCGGCGGACACAGCGGTCACCAGCGCA
GCAGCGGCGCTGACGCCGGCTGCGGCGGCAGCGGCCGCGGCCGACTTGCC
GTGCTCCCTGCATGACGGCAACCGGCGACCAGAGCGAGACGCCTACTGCC
TCTGCGTGTTCGAGCACCTTTGTCGGAATGCCCTGTTCCGCCGCCTGCGA
CTACCGCACCGCTTCCAAGCCCTGGTCAGCGTCCAGCTCCTCGGTCTCAA
GAACCTGAGCCCGCACTACCACCCTGCCAAGACGGACGTCTTCGCCGCGG
TAAGCCTCAAGCGCCTCGACATGACGGCGGCCGTCGGGAACGGCAACGGC
AACTACGCCGCCGCCGCCGCCGCCGCCGGCCACAGCGGCGGCGAGGCGGC
GGCGAAGCGTCGCGGCCGCAACACGTCGGTGACCGCGATAAAGCGGCTGC
TGCCGACGGCGAACGGGCAGGAGAGCCAACAGTCCCGCTGGGGCGCCAAG
GCGGCGTTTCGGTTCCCGCTGCCGGAGGAGGCGTCGCCGTTCGTGCTGGC
CTACGGGGACGGGGCTTACGAGCTCGTCATGGGCGGCACCGGGAAGGGGG
GGATGGGGAGCCAGGGCCCGCCTAGGTGCGTGCGGATAGCGGTGTGGCGG
AAGCAGTTCCTGGCGGACCAGCGGCTGGGGGAGGTGGACGTCCCGCTCGG
GAAGCTGGACGATCGCGGGGACATCGACGAGTGGGTGGCGCTTCGAGGGG
ACAAAGGCTCTTCATGGTTCGTGAACGTTCGGTTCAGCTTACGGTTCGTG
ATGGTGAGCGTTTCAGACCCCGTCCCCGACGAGGAAGACTCGGAAGACCT
GGCGGCGGTAGCCGTGGAAGAGGAGAACCCGGGGATGACTCTGTCTTACG
CTCTCGCGGACGTCGACATCATGTAG
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