prot_Ecto-sp13_S_contig8373.19739.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8373.19739.1
Unique Nameprot_Ecto-sp13_S_contig8373.19739.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: A0A6H5K7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G3_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.500e-61
Identity = 106/123 (86.18%), Postives = 114/123 (92.68%), Query Frame = 0
Query:    2 KPGPDSDRFVPNEGGLALKQRQAV-TETADDFLARAQERAPSAGNDVVTLGKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVSDDLVPQDELRDMLALHDELLRDRSADN 123
            K GPDSD  VP+ GGLALKQRQAV TET DDFL RAQERAP+AGNDVVTLG++AEAVE LKEVHS+YDELHREHDAKL RFQRAVDRITRKLAAVS+DLVPQDELR+MLALHDELLR+RSADN
Sbjct:  155 KTGPDSDSLVPSGGGLALKQRQAVVTETVDDFLERAQERAPAAGNDVVTLGQLAEAVEPLKEVHSKYDELHREHDAKLGRFQRAVDRITRKLAAVSNDLVPQDELREMLALHDELLRERSADN 277          
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: A0A6H5KC16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC16_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 3.090e-61
Identity = 105/123 (85.37%), Postives = 114/123 (92.68%), Query Frame = 0
Query:    1 MKPGPDSDRFVPNEGGLALKQRQAVTETADDFLARAQERAPSAGNDVVTLGKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVSDDLVPQDELRDMLALHDELLRDRSADN 123
            MK GPDSD  VP+ GGLALKQRQAVTET DDFL RAQERAP+A NDVVTLG++AEAVELLK+ HSQY+ELHREHDAKL RFQRAVDRITRKLAAVSDDLVPQDELR++LALHDELLR+RSADN
Sbjct:  269 MKIGPDSDSLVPSGGGLALKQRQAVTETVDDFLERAQERAPAADNDVVTLGQLAEAVELLKDEHSQYNELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADN 391          
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.700e-54
Identity = 104/124 (83.87%), Postives = 115/124 (92.74%), Query Frame = 0
Query:    1 MKPGPDSDRFVPNEGGLALKQRQAVTETA-DDFLARAQERAPSAGNDVVTLGKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVSDDLVPQDELRDMLALHDELLRDRSADN 123
            MKPGPDSD  V + GGLALKQRQAVTETA DDFL RAQERAP+AGNDVVTLG++AEAVELLKEVHS+ DELHREHDAKL+RFQ AVDRITRKLAAVS+DLVPQ+ELR++LALHDELLR+RSA N
Sbjct:  837 MKPGPDSDSLVASGGGLALKQRQAVTETALDDFLERAQERAPAAGNDVVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDRITRKLAAVSNDLVPQNELREILALHDELLRERSAIN 960          
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.090e-49
Identity = 99/124 (79.84%), Postives = 109/124 (87.90%), Query Frame = 0
Query:    1 MKPGPDSDRFVPNEGGLALKQRQAVTETA-DDFLARAQERAPSAGNDVVTLGKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVSDDLVPQDELRDMLALHDELLRDRSADN 123
            MKPGPDSD  V +    ALKQRQAVTETA DDFL RAQERAP+AGNDVVTLG++ EAVELLKEVHS+YDELHREHDAKLSRFQRAVDRITRK    S+DLVPQ+ELR++LALHDELLR+RSA N
Sbjct:  864 MKPGPDSDSLVAS----ALKQRQAVTETAVDDFLERAQERAPAAGNDVVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDRITRKCTLESNDLVPQNELREILALHDELLRERSAIN 983          
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 1.760e-47
Identity = 92/123 (74.80%), Postives = 104/123 (84.55%), Query Frame = 0
Query:    1 MKPGPDSDRFVPNEGGLALKQRQAVTETADDFLARAQERAPSAGNDVVTLGKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVSDDLVPQDELRDMLALHDELLRDRSADN 123
            MKPGPDSD  VP+ GG AL+QRQAVTE  DDFL R+QERAP+AGNDVVTLG++AEAVELLKEV S++DELHREHDA LSR QRAV +ITRK   +SD LVPQDELR+ LALHDELLR+  A N
Sbjct: 1070 MKPGPDSDSLVPSGGGQALQQRQAVTERVDDFLERSQERAPAAGNDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKSETMSDGLVPQDELRETLALHDELLRELGAKN 1192          
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: A0A6H5JHX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX7_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 6.570e-20
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0
Query:   40 APSAGNDVVTLGKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVS 96
            AP+A NDVVTLG+VAEAVELLKEVH +YDELHREHDAKLSRFQR +D+I RK  + S
Sbjct:   15 APAASNDVVTLGQVAEAVELLKEVHCKYDELHREHDAKLSRFQRTIDKIGRKCTSES 71          
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Match: A0A6H5JP57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP57_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.060e-11
Identity = 37/57 (64.91%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 MKPGPDSDRFVPNEGGLALKQRQAVTETADDFLARAQERAP----SAGNDVVTLGKV 53
            MK GPDSD  VP+ GGLALKQRQAVTET DDFL RAQER        G +V TLG +
Sbjct:  146 MKTGPDSDSLVPSGGGLALKQRQAVTETVDDFLERAQERGKFPLLCTGLEVATLGVI 202          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8373.19739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K7G3_9PHAE1.500e-6186.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC16_9PHAE3.090e-6185.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUA2_ECTSI1.700e-5483.87Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
D7FUA1_ECTSI1.090e-4979.84Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7FUA0_ECTSI1.760e-4774.80Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5JHX7_9PHAE6.570e-2077.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP57_9PHAE2.060e-1164.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8373contigEcto-sp13_S_contig8373:856..3675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8373.19739.1mRNA_Ecto-sp13_S_contig8373.19739.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8373 530..5461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8373.19739.1 ID=prot_Ecto-sp13_S_contig8373.19739.1|Name=mRNA_Ecto-sp13_S_contig8373.19739.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MKPGPDSDRFVPNEGGLALKQRQAVTETADDFLARAQERAPSAGNDVVTL
GKVAEAVELLKEVHSQYDELHREHDAKLSRFQRAVDRITRKLAAVSDDLV
PQDELRDMLALHDELLRDRSADNS*
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