prot_Ecto-sp13_S_contig8366.19732.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8366.19732.1
Unique Nameprot_Ecto-sp13_S_contig8366.19732.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8366.19732.1 vs. uniprot
Match: D7G531_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G531_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 3.240e-104
Identity = 178/190 (93.68%), Postives = 180/190 (94.74%), Query Frame = 0 
Query:    1 MRLAREALTAPAQPASSALPRAQQPRNNPGSDGGGGDFGRGRAVSPDISGDLGRRRGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRGRNRSPRPNDQYSPKLGDEDSHQHRDPRHHLYHDGYSSASPSPRIRRGMSDPWAYADDDQHPRSSSQPRAVSRDDNQVTSGEVSGGGSIGPAPAASGVGR 190
            +RLAREALTAPAQPASSALP AQQ RNNP SDGGGGDFGRGRAVSP  SGDLGRRRGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRGRNRSPRPN QYSPKLG EDSHQHRD RHHLYHDGYSSASPSPRIRR MSDPWAYADDD+HPRSSSQPRAVSRDDNQV SGEVSGGGSIGPAPAASGVGR
Sbjct:  141 IRLAREALTAPAQPASSALPGAQQERNNPCSDGGGGDFGRGRAVSPARSGDLGRRRGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRGRNRSPRPNGQYSPKLGGEDSHQHRDLRHHLYHDGYSSASPSPRIRRSMSDPWAYADDDEHPRSSSQPRAVSRDDNQVASGEVSGGGSIGPAPAASGVGR 330
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8366.19732.1 vs. uniprot
Match: A0A6H5KAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ7_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 8.360e-94
Identity = 175/204 (85.78%), Postives = 178/204 (87.25%), Query Frame = 0 
Query:    1 MRLAREALTAPAQPASSALPRAQQPRNNPGSDGGGGDFGRGRAVSPDISGDLGRRRGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRGRN------------RSPRPNDQY-SPKLGDEDSHQHRDPRHHLYHDGYSSASPSPRIRRGMSDPWAYADDDQHPRSSSQPRAVSRDDNQVTSGEVSGGGSIGPAPAASGVGRE 191
            MRLAREALTAPA PASSALP  QQ RNNPGSDGG GDFGRGRA+SP +SGDLGR RGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRG N            RSPRPN QY SPKLGDEDSHQHRD RHHLYHDGYSSASPSPRIRRGM+DPWAYADDDQH RSSSQPRAVSRDDNQVT  EVSGGGSIGPAPAASGVGRE
Sbjct:  137 MRLAREALTAPAPPASSALPGTQQ-RNNPGSDGGLGDFGRGRAISPALSGDLGRPRGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRGPNXXXXXXXPVVESRSPRPNGQYYSPKLGDEDSHQHRDLRHHLYHDGYSSASPSPRIRRGMTDPWAYADDDQHLRSSSQPRAVSRDDNQVTPLEVSGGGSIGPAPAASGVGRE 339
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8366.19732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G531_ECTSI3.240e-10493.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAZ7_9PHAE8.360e-9485.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8366contigEcto-sp13_S_contig8366:84..1271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8366.19732.1mRNA_Ecto-sp13_S_contig8366.19732.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8366 81..1271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8366.19732.1 ID=prot_Ecto-sp13_S_contig8366.19732.1|Name=mRNA_Ecto-sp13_S_contig8366.19732.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MRLAREALTAPAQPASSALPRAQQPRNNPGSDGGGGDFGRGRAVSPDISG
DLGRRRGGHADSRSPVPRSSPSTPGVEDRPHRRTRRGGRRGRNRSPRPND
QYSPKLGDEDSHQHRDPRHHLYHDGYSSASPSPRIRRGMSDPWAYADDDQ
HPRSSSQPRAVSRDDNQVTSGEVSGGGSIGPAPAASGVGRE
back to top