mRNA_Ecto-sp13_S_contig8363.19731.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A6H5KZE4_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE4_9PHAE) HSP 1 Score: 415 bits (1066), Expect = 4.860e-125 Identity = 296/466 (63.52%), Postives = 301/466 (64.59%), Query Frame = 1
Query: 1 SATGDVSWEASVPVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTXXXXXXXXXXXXXXLVTVHQGAAVSPEGADSVAAAAAEAPQAQTIHGGAGASEEKEEKGREKAAVEAGVGVVASIPATIGGGSGGVGMMASGGIPPPLVDGGXXXXXXXXXXVGEAESPSRRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 1398
SATGDVSW+ASVPVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMV+GVGEVYAGNVVSGTVSVGDRLLLGPTG RGAFVRTAVASVHVAR XXXXXXXX VDGG XXXXX +GE ESPSRRTRKGMVLVEAT LPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAA DSVG APPXXXXXXXXXXXXXXX P AA D ATAAPAGA AGGGA+E AVVESEE GAI TAAGPGPARAAPSAGIKSGERA+CRFRFLYRPEYLSVGTTIVLREGRTRGFGKI SVH
Sbjct: 751 SATGDVSWDASVPVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVDGVGEVYAGNVVSGTVSVGDRLLLGPTGSRGAFVRTAVASVHVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------XVDGGGAGXXXXXG-IGEVESPSRRTRKGMVLVEATVLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAVDSVGAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-------------------AAVDSKATAAPAGAE--AGGGAMEPAVVESEETGAIATAAGPGPARAAPSAGIKSGERAVCRFRFLYRPEYLSVGTTIVLREGRTRGFGKITSVH 1105
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: D7FYC0_ECTSI (GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC0_ECTSI) HSP 1 Score: 343 bits (879), Expect = 1.050e-99 Identity = 258/473 (54.55%), Postives = 259/473 (54.76%), Query Frame = 1
Query: 1 SATGDVSWEASVPVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTXXXXXXXXXXXXXXLVTVHQGAAVSPEGADSVAAAAAEAPQAQTIHGGAGASEEKEE-------KGREKAAVEAGVGVVASIPATIGGGSGGVGMMASGGIPPPLVDGGXXXXXXXXXXVGEAESPSRRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 1398
SATGDVSWEASVPVMQVSSVTSDGIA+LRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDT XXXXXXXX V VH KGREKA VEAGVGVVASIPA IGGG GG GMMASGG P PLVDGG XXXXXX VGEAESP RRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPG FRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH
Sbjct: 619 SATGDVSWEASVPVMQVSSVTSDGIADLRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTDSDGDEXXXXXXXXXVAVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGREKA-VEAGVGVVASIPARIGGGCGGAGMMASGGTPAPLVDGGGGXXXXXX--VGEAESP-RRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPG------------------------------------------------------------------------------------------------------------------------------------------------------FRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 937
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A835YY92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY92_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.190e-12 Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 1255 APSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISV 1395
A S+GI SGERA+CRFRF++ PEYL VGT IVLREG+TRGFG++++V
Sbjct: 56 AQSSGICSGERAVCRFRFMHHPEYLRVGTAIVLREGQTRGFGRVLAV 102
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7S2W1H7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1H7_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.500e-10 Identity = 63/215 (29.30%), Postives = 93/215 (43.26%), Query Frame = 1
Query: 760 RKGMVLVEATGLPNTSYEFEAEVMVLHHPG-VIRENYQPVVHAHNICQSARITSMLLSTAAEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAG-----PGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKI 1386
R+GMVL+ + P YEF+A+V++L HPG I+ +Y+P+VH H I QSA+ITS+ S G + P P+ +D++ +AAA ET + E A ++ G + A S + G+RA RFRF+Y+PEY+S G +IV RE RG G +
Sbjct: 542 RRGMVLLGSCSTPKAVYEFDADVVLLEHPGGSIKVDYEPIVHIHTIAQSAKITSIF-------SAGTSDPPPSSRSRNPPQDGIAAPSADLDASILAAALEPIALTE-----------------------------------ETRIHSRNERSARTSSTNRTPFDEGELQPAQSGPLLRGQRASVRFRFVYKPEYVSPGDSIVFREACMRGVGTV 714
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7R9UBW3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBW3_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.570e-10 Identity = 81/225 (36.00%), Postives = 109/225 (48.44%), Query Frame = 1
Query: 754 RTRKGMVLVEAT---GLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTA--------AEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISV 1395
R RKG+VL++ G+P EF+AEV++LHHP I Y+PV+HA ++ QSAR+ ++ + +EDS AP + + XXXXXXXXXXXXXXX A T + A G+ + A VE ++ + I G RAICRFRFLYRPE++ GT I+ REG TRG G I+ V
Sbjct: 524 RARKGLVLLDPRRREGVPFAVREFDAEVVLLHHPNGIVSGYEPVIHAQSVRQSARVIEIIPADVYEKRKRSNSEDSTNDVAAAESSGEGPAPVLASSCDAPAFQTPGMGHGAEVAXXXXXXXXXXXXXXXGDANIVTDSDEDTLAEDAGDSGSADPAGVEFDDDEEV----------------ILPGGRAICRFRFLYRPEFVYPGTKILFREGCTRGVGSIVDV 732
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A177VPK9_9BASI (Tr-type G domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VPK9_9BASI) HSP 1 Score: 74.7 bits (182), Expect = 5.870e-10 Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 37 PVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 372
P+ VS+VT DG+ LR+FL L P A+ K + E +IS+ F V VG V +G +VSG+V VGD LL+GP G F+ T V S+ R+ V A AGQ+ASF L
Sbjct: 453 PIFLVSNVTGDGLGNLRSFLNVL----PQSALTKYSSKGPFEFQISDIFSVPFVGTVVSGVIVSGSVKVGDNLLIGPDS-LGGFLPTTVRSIERKRVGVDVAYAGQSASFAL 559
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A316UAB5_9BASI (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UAB5_9BASI) HSP 1 Score: 72.8 bits (177), Expect = 2.150e-9 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 37 PVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 372
P+ Q+S+VT + LR+FL L P + K GK E++IS+ F V VG +G + SG+V +GD LL+GP G F++TAV S+ R+ V A AGQ+ASF L
Sbjct: 392 PIFQISNVTGHNLDLLRSFLNVL----PQSNISKYDAGKPFELQISDIFSVPFVGTTVSGVITSGSVKIGDSLLIGPDS-LGQFIQTAVRSIQRKRVNVESAVAGQSASFAL 498
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A177V2Q7_9BASI (Tr-type G domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177V2Q7_9BASI) HSP 1 Score: 72.4 bits (176), Expect = 3.030e-9 Identity = 49/112 (43.75%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 37 PVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 372
P+ VS+VT DG+ LR+FL L P K E +IS+ F V VG V +G +VSG+V VGD LL+GP G F+ T V S+ R+ V A AGQ+ASF L
Sbjct: 451 PIFLVSNVTGDGLGNLRSFLNVL----PQSGASKYPSKAPFEFQISDIFSVPFVGTVVSGVIVSGSVKVGDNLLIGPDS-LGGFLPTTVRSIERKRVGVDAAYAGQSASFAL 557
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7S1ETP2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETP2_9RHOD) HSP 1 Score: 71.2 bits (173), Expect = 4.390e-9 Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 34 VPVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASF 366
VP +S+VT +G+ LR+FL + P + + E + + AE I F V GVG V AG VSG+VS G L LGP G F + V SVH R V++ AG+ SF
Sbjct: 361 VPFFVISNVTGEGLGYLRSFLNIIQPRKD----WTEFKSQPAEFSIDEIFTVPGVGTVVAGTTVSGSVSAGQVLALGPDSS-GHFTKVQVKSVHYKRTPVKKVVAGEAGSF 466
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7J2JR77_9ARCH (Tr-type G domain-containing protein n=2 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A7J2JR77_9ARCH) HSP 1 Score: 71.2 bits (173), Expect = 5.110e-9 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 37 PVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 372
P+ VS+VT +G+ L++F+ L P + E +G + F V GVG V +G V SG+VS GDR+LLGP G+F V S+HV RL V RA AGQ A F L
Sbjct: 310 PIFLVSNVTGEGLDLLKSFINMLPP----RLDWSEKQGGRFLSYVDEKFDVSGVGLVVSGLVESGSVSAGDRVLLGPFDD-GSFRTVRVRSIHVNRLPVERAVAGQMAGFAL 416 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8363.19731.1 >prot_Ecto-sp13_S_contig8363.19731.1 ID=prot_Ecto-sp13_S_contig8363.19731.1|Name=mRNA_Ecto-sp13_S_contig8363.19731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp MQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEback to top mRNA from alignment at Ecto-sp13_S_contig8363:599..6084- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8363.19731.1 ID=mRNA_Ecto-sp13_S_contig8363.19731.1|Name=mRNA_Ecto-sp13_S_contig8363.19731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8363:599..6084- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8363:599..6084- >mRNA_Ecto-sp13_S_contig8363.19731.1 ID=mRNA_Ecto-sp13_S_contig8363.19731.1|Name=mRNA_Ecto-sp13_S_contig8363.19731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8363:599..6084- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |