prot_Ecto-sp13_S_contig8363.19731.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8363.19731.1
Unique Nameprot_Ecto-sp13_S_contig8363.19731.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length453
Homology
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A6H5KZE4_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE4_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 3.560e-122
Identity = 283/452 (62.61%), Postives = 287/452 (63.50%), Query Frame = 0
Query:    1 MQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTXXXXXXXXXXXXXXLVTVHQGAAVSPEGADSVAAAAAEAPQAQTIHGGAGASEEKEEKGREKAAVEAGVGVVASIPATIGGGSGGVGMMASGGIPPPLVDGGXXXXXXXXXXVGEAESPSRRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 452
            MQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMV+GVGEVYAGNVVSGTVSVGDRLLLGPTG RGAFVRTAVASVHVAR                      XXXXXXXX                                                                                          VDGG   XXXXX  +GE ESPSRRTRKGMVLVEAT LPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAA DSVG APPXXXXXXXXXXXXXXX              P                   AA D  ATAAPAGA   AGGGA+E AVVESEE GAI TAAGPGPARAAPSAGIKSGERA+CRFRFLYRPEYLSVGTTIVLREGRTRGFGKI SVH
Sbjct:  765 MQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVDGVGEVYAGNVVSGTVSVGDRLLLGPTGSRGAFVRTAVASVHVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------XVDGGGAGXXXXXG-IGEVESPSRRTRKGMVLVEATVLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAVDSVGAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-------------------AAVDSKATAAPAGAE--AGGGAMEPAVVESEETGAIATAAGPGPARAAPSAGIKSGERAVCRFRFLYRPEYLSVGTTIVLREGRTRGFGKITSVH 1105          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: D7FYC0_ECTSI (GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC0_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 8.020e-96
Identity = 244/459 (53.16%), Postives = 245/459 (53.38%), Query Frame = 0
Query:    1 MQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTXXXXXXXXXXXXXXLVTVHQGAAVSPEGADSVAAAAAEAPQAQTIHGGAGASEEKEE-------KGREKAAVEAGVGVVASIPATIGGGSGGVGMMASGGIPPPLVDGGXXXXXXXXXXVGEAESPSRRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 452
            MQVSSVTSDGIA+LRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDT      XXXXXXXX V VH                                             KGREKA VEAGVGVVASIPA IGGG GG GMMASGG P PLVDGG  XXXXXX  VGEAESP RRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPG                                                                                                                                                      FRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH
Sbjct:  633 MQVSSVTSDGIADLRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTDSDGDEXXXXXXXXXVAVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGREKA-VEAGVGVVASIPARIGGGCGGAGMMASGGTPAPLVDGGGGXXXXXX--VGEAESP-RRTRKGMVLVEATGLPNTSYEFEAEVMVLHHPG------------------------------------------------------------------------------------------------------------------------------------------------------FRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 937          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A835YY92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY92_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.370e-12
Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 0
Query:  405 APSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISV 451
            A S+GI SGERA+CRFRF++ PEYL VGT IVLREG+TRGFG++++V
Sbjct:   56 AQSSGICSGERAVCRFRFMHHPEYLRVGTAIVLREGQTRGFGRVLAV 102          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7S2W1H7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1H7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.620e-11
Identity = 63/215 (29.30%), Postives = 93/215 (43.26%), Query Frame = 0
Query:  240 RKGMVLVEATGLPNTSYEFEAEVMVLHHPG-VIRENYQPVVHAHNICQSARITSMLLSTAAEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAG-----PGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKI 448
            R+GMVL+ +   P   YEF+A+V++L HPG  I+ +Y+P+VH H I QSA+ITS+        S G + P                P+  +D++ +AAA                                           ET +    E  A  ++        G  + A S  +  G+RA  RFRF+Y+PEY+S G +IV RE   RG G +
Sbjct:  542 RRGMVLLGSCSTPKAVYEFDADVVLLEHPGGSIKVDYEPIVHIHTIAQSAKITSIF-------SAGTSDPPPSSRSRNPPQDGIAAPSADLDASILAAALEPIALTE-----------------------------------ETRIHSRNERSARTSSTNRTPFDEGELQPAQSGPLLRGQRASVRFRFVYKPEYVSPGDSIVFREACMRGVGTV 714          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7R9UBW3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBW3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.450e-11
Identity = 81/226 (35.84%), Postives = 109/226 (48.23%), Query Frame = 0
Query:  238 RTRKGMVLVEAT---GLPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTA--------AEDSVGVAPPXXXXXXXXXXXXXXXVPAPLVDSTEIAAAPXXXXXXXXXXXXXXXXXXXAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPGPARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIISVH 452
            R RKG+VL++     G+P    EF+AEV++LHHP  I   Y+PV+HA ++ QSAR+  ++ +          +EDS                       AP   +  +       XXXXXXXXXXXXXXX  A   T +     A      G+ + A VE ++   +                I  G RAICRFRFLYRPE++  GT I+ REG TRG G I+ V 
Sbjct:  524 RARKGLVLLDPRRREGVPFAVREFDAEVVLLHHPNGIVSGYEPVIHAQSVRQSARVIEIIPADVYEKRKRSNSEDSTNDVAAAESSGEGPAPVLASSCDAPAFQTPGMGHGAEVAXXXXXXXXXXXXXXXGDANIVTDSDEDTLAEDAGDSGSADPAGVEFDDDEEV----------------ILPGGRAICRFRFLYRPEFVYPGTKILFREGCTRGVGSIVDVR 733          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A177VPK9_9BASI (Tr-type G domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VPK9_9BASI)

HSP 1 Score: 71.6 bits (174), Expect = 1.360e-9
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    3 VSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 110
            VS+VT DG+  LR+FL  L    P  A+ K +     E +IS+ F V  VG V +G +VSG+V VGD LL+GP    G F+ T V S+   R+ V  A AGQ+ASF L
Sbjct:  457 VSNVTGDGLGNLRSFLNVL----PQSALTKYSSKGPFEFQISDIFSVPFVGTVVSGVIVSGSVKVGDNLLIGPDS-LGGFLPTTVRSIERKRVGVDVAYAGQSASFAL 559          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A177V2Q7_9BASI (Tr-type G domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177V2Q7_9BASI)

HSP 1 Score: 69.3 bits (168), Expect = 7.320e-9
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    3 VSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 110
            VS+VT DG+  LR+FL  L    P     K       E +IS+ F V  VG V +G +VSG+V VGD LL+GP    G F+ T V S+   R+ V  A AGQ+ASF L
Sbjct:  455 VSNVTGDGLGNLRSFLNVL----PQSGASKYPSKAPFEFQISDIFSVPFVGTVVSGVIVSGSVKVGDNLLIGPDS-LGGFLPTTVRSIERKRVGVDAAYAGQSASFAL 557          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A316UAB5_9BASI (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UAB5_9BASI)

HSP 1 Score: 68.9 bits (167), Expect = 9.190e-9
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    2 QVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 110
            Q+S+VT   +  LR+FL  L    P   + K   GK  E++IS+ F V  VG   +G + SG+V +GD LL+GP    G F++TAV S+   R+ V  A AGQ+ASF L
Sbjct:  395 QISNVTGHNLDLLRSFLNVL----PQSNISKYDAGKPFELQISDIFSVPFVGTTVSGVITSGSVKIGDSLLIGPDS-LGQFIQTAVRSIQRKRVNVESAVAGQSASFAL 498          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7S1ETP2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETP2_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 1.210e-8
Identity = 43/106 (40.57%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    3 VSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASF 108
            +S+VT +G+  LR+FL  + P +     + E + + AE  I   F V GVG V AG  VSG+VS G  L LGP    G F +  V SVH  R  V++  AG+  SF
Sbjct:  366 ISNVTGEGLGYLRSFLNIIQPRKD----WTEFKSQPAEFSIDEIFTVPGVGTVVAGTTVSGSVSAGQVLALGPDSS-GHFTKVQVKSVHYKRTPVKKVVAGEAGSF 466          
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Match: A0A7J2JR77_9ARCH (Tr-type G domain-containing protein n=2 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A7J2JR77_9ARCH)

HSP 1 Score: 68.2 bits (165), Expect = 1.350e-8
Identity = 47/108 (43.52%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    3 VSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTL 110
            VS+VT +G+  L++F+  L P       + E +G      +   F V GVG V +G V SG+VS GDR+LLGP    G+F    V S+HV RL V RA AGQ A F L
Sbjct:  314 VSNVTGEGLDLLKSFINMLPP----RLDWSEKQGGRFLSYVDEKFDVSGVGLVVSGLVESGSVSAGDRVLLGPFDD-GSFRTVRVRSIHVNRLPVERAVAGQMAGFAL 416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8363.19731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZE4_9PHAE3.560e-12262.61Tr-type G domain-containing protein n=1 Tax=Ectoca... [more]
D7FYC0_ECTSI8.020e-9653.16GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A835YY92_9STRA1.370e-1270.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2W1H7_9STRA2.620e-1129.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UBW3_9STRA3.450e-1135.84Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A177VPK9_9BASI1.360e-945.37Tr-type G domain-containing protein n=2 Tax=Tillet... [more]
A0A177V2Q7_9BASI7.320e-944.44Tr-type G domain-containing protein n=2 Tax=Tillet... [more]
A0A316UAB5_9BASI9.190e-942.20P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1ETP2_9RHOD1.210e-840.57Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7J2JR77_9ARCH1.350e-843.52Tr-type G domain-containing protein n=2 Tax=Candid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 37..128
e-value: 2.6E-11
score: 45.3
NoneNo IPR availableGENE3D2.40.30.10coord: 253..303
e-value: 5.3E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR43721FAMILY NOT NAMEDcoord: 2..451
IPR039263GTP-binding protein 1PANTHERPTHR43721:SF9GTP-BINDING PROTEIN 1coord: 2..451
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalSUPERFAMILY50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 255..294
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 41..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8363contigEcto-sp13_S_contig8363:1982..6042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8363.19731.1mRNA_Ecto-sp13_S_contig8363.19731.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8363 599..6084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8363.19731.1 ID=prot_Ecto-sp13_S_contig8363.19731.1|Name=mRNA_Ecto-sp13_S_contig8363.19731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp
MQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVE
GVGEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRA
SAGQTASFTLVTDPDTDSDGDEEQERGGGGLVTVHQGAAVSPEGADSVAA
AAAEAPQAQTIHGGAGASEEKEEKGREKAAVEAGVGVVASIPATIGGGSG
GVGMMASGGIPPPLVDGGRGGGSGGGGGVGEAESPSRRTRKGMVLVEATG
LPNTSYEFEAEVMVLHHPGVIRENYQPVVHAHNICQSARITSMLLSTAAE
DSVGVAPPPPPPPAPVPVPAAGPVPAPLVDSTEIAAAPAAPAAPAADSTE
TAATAAPAAADFTATAAPAGAGRGAGGGAIETAVVESEEAGAIETAAGPG
PARAAPSAGIKSGERAICRFRFLYRPEYLSVGTTIVLREGRTRGFGKIIS
VH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039263GTPB1
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR009000Transl_B-barrel_sf