prot_Ecto-sp13_S_contig836.19727.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig836.19727.1
Unique Nameprot_Ecto-sp13_S_contig836.19727.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: D8LG13_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG13_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 2.120e-116
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 0
Query:    1 MKASSRRLLGGEPEEKSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAGFWSGLRGGG 173
            MKASS RLLGGEPEEKS LQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVR VATSIYLATLSATLFVALSPYASVP RGILLLCLVVAQFLSYVWYTLSYVPFARRFMAGFWSGLRGGG
Sbjct:    8 MKASSMRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRAVATSIYLATLSATLFVALSPYASVPFRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAGFWSGLRGGG 180          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A835Z2J1_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J1_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.760e-59
Identity = 93/165 (56.36%), Postives = 125/165 (75.76%), Query Frame = 0
Query:    1 MKASSRRLLGGEPEE-KSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAG 164
            ++ S+RRLLG E    K+  +E+EE VCS CPSL+++ RLIG+G CL +GF LTFG+LFR+ +L+ GNP PFV+ +S+G+ ++IC+SFFL GPW QIKKMF P RVVAT +Y+ TL  T  VAL+P   +P R  LL+ LVV QF+S++WY LSY+PFAR + AG
Sbjct:   25 VRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAP--RMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAG 187          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: F0YE90_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE90_AURAN)

HSP 1 Score: 163 bits (413), Expect = 2.790e-48
Identity = 78/160 (48.75%), Postives = 108/160 (67.50%), Query Frame = 0
Query:    3 ASSRRLLGGEPEEKSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARRFM 162
            AS+R LL GEP  ++  +++EE  C  CP LSW+ RLIG+  C A+G  +  GS  R+ +L+ GNP+PF + +SLG+ + ICSSFFL GP+KQ K M  P RV+AT+ YL  + ATLFVAL   A +P R  L++ LV  Q ++  WY +SY+PFAR F+
Sbjct:    2 ASTRSLLTGEPRPQTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAICSSFFLAGPYKQCKSMLAPTRVIATATYLVAIGATLFVALFD-ARIPARAGLIILLVCVQTIALFWYMISYIPFARDFV 160          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA)

HSP 1 Score: 142 bits (357), Expect = 9.690e-40
Identity = 67/154 (43.51%), Postives = 110/154 (71.43%), Query Frame = 0
Query:   12 EPEEKSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRG---ILLLCLVVAQFLSYVWYTLSYVPFARRFM 162
            E + K+A +E E+A+CS+CP L+++ R+ GY AC  V FCL+ GS  R+ +L+ GNP PFV++++LG+ + I  S FL+GP  Q KKM++P R +ATS+YL T+  T+FVA   Y  +P  G   I+++C+ + Q+++ +WYT+S++P+AR ++
Sbjct:   12 EEKPKTAAEEFEDALCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAIIGSLFLSGPRAQCKKMWDPTRRIATSVYLLTIFFTIFVAF--YEGIPDDGRIGIIIMCIFI-QWIAMLWYTISFIPYARDYV 162          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A5D6Y7U4_9STRA (Vesicle transport protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7U4_9STRA)

HSP 1 Score: 124 bits (311), Expect = 8.190e-33
Identity = 63/160 (39.38%), Postives = 102/160 (63.75%), Query Frame = 0
Query:    1 MKASSRRLLGGEPEEKSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARR 160
            ++   ++LL  E +++ A     E + +VCPSL+++ R+IG   C  +GF ++ GS FR+A+L+ G+P PF + +++G+ L++ SS F  GP KQ++ MF+  R  +  +Y+  +  TL +  SP   VP R  L+L  V+ QFL+ VWYTLSYVP+ RR
Sbjct:    5 LRQQRQKLLDPESQKREAGGSFREELGTVCPSLTYQERVIGCVTCFTLGFLISLGSTFRLAKLVNGHPGPFAMAYTIGNLLSLASSMFFVGPCKQLQTMFHRKRRGSALVYIVFIGLTLALCFSP--RVPHRVALVLVCVLTQFLALVWYTLSYVPYGRR 162          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A8J2SX58_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX58_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.510e-32
Identity = 66/157 (42.04%), Postives = 100/157 (63.69%), Query Frame = 0
Query:    6 RRLLGGEPEEKSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRG---ILLLCLVVAQFLSYVWYTLSYVPFAR 159
            R+ +G E ++    Q ++E+    CP LS+  RL GY  C+++GF LT GSL R+ +LL G P+ FV+YF+ G+   I S FFL+GP    KKM +P R +AT+ YL T+  T FV    Y  +P  G   I++LC+ + Q+++ +WYT+S++PFAR
Sbjct:    5 RKAVGIEKKQTVTDQILDES----CPKLSYNQRLTGYVLCMSIGFILTMGSLVRLKELLHGEPKNFVIYFTFGNLCAIASCFFLSGPKSHCKKMIDPTRRIATAFYLITIFFTFFVVF--YEKIPDDGRVGIIILCVFI-QWIAMLWYTISFIPFAR 154          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A2D4BV73_PYTIN (Vesicle transport protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV73_PYTIN)

HSP 1 Score: 117 bits (293), Expect = 3.850e-30
Identity = 59/138 (42.75%), Postives = 91/138 (65.94%), Query Frame = 0
Query:   23 EEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARR 160
            +E V S+CPSLS+  R+IG+  C  +GF L+FGS FR+A+L+ GNP PF + +++G+ L++ SS F  GP KQ++ MF   R  +  IYL+ +  TL +  +    +P R  L++  V+ QF + VWYTLSY+P+ R+
Sbjct:   24 KEEVNSICPSLSYHERVIGFLTCFLLGFLLSFGSTFRLAKLVHGNPGPFAIAYTIGNLLSLGSSMFFVGPCKQVETMFRKKRRGSAIIYLSFIVVTLVLCFAR--DMPHRFGLVMISVLCQFAALVWYTLSYIPYGRQ 159          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A1E7FNZ9_9STRA (Vesicle transport protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNZ9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.370e-29
Identity = 53/130 (40.77%), Postives = 85/130 (65.38%), Query Frame = 0
Query:   31 PSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARR 160
            P+LS R +L+G   C+  G+ L+ GS  R+  L+ GNP P V+  ++G+ + +C + FLTGP  Q+ +MF+  R +A+  YL +L+ T+F+ L P+     RG+LLL L++ Q+++  WY LSY+PFAR 
Sbjct:    1 PTLSLREKLLGCATCMVCGYLLSLGSFMRLKDLMIGNPVPLVVNVTVGNIIALCGTCFLTGPQSQLNRMFHKSRKIASIFYLGSLAVTMFLLLLPHFLF--RGLLLLLLMIGQYVAISWYCLSYIPFARE 128          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A662WFW4_9STRA (Vesicle transport protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WFW4_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.950e-28
Identity = 55/136 (40.44%), Postives = 91/136 (66.91%), Query Frame = 0
Query:   24 EAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFAR 159
            E + ++CPSLS++ R+IG   C  +GF L+ GS FR+A+L+ GNP PF + +++G+ L+I  + F  GP KQ++ MF+  R  + ++Y+  +  TL +  SP+  +  R +L+L  V+ QF++ +WYTLSYVP+ R
Sbjct:   32 EGLNTLCPSLSYQERVIGCVTCFMLGFLLSLGSTFRLAKLVHGNPAPFAIAYTIGNVLSIGCTTFFVGPCKQVQTMFHSKRRWSAAVYVLFIFVTLGLCFSPH--IHHRVLLVLLSVLVQFVALIWYTLSYVPYGR 165          
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Match: A0A1Z5KRX6_FISSO (Vesicle transport protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRX6_FISSO)

HSP 1 Score: 112 bits (281), Expect = 3.110e-28
Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   27 CSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGN-PRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAGF 165
            CS  P ++WR RL+G   C+  G+ L+ GS +R+  L+  + P PFVL  ++G+ + +  SFFLTGP  Q K M+   R +AT +YL +L  TLFVA  P       G  LL L++ Q++S  WYTLSYVPFA   +  F
Sbjct:   41 CSCFPEMTWRERLLGCVTCMLCGYMLSIGSFWRIKDLVINHDPLPFVLNATIGNIIALAGSFFLTGPKAQWKNMWLEKRRIATGLYLGSLFLTLFVAFLPIPGP--EGFYLLLLMLCQYISITWYTLSYVPFAHDIIVSF 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig836.19727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG13_ECTSI2.120e-11697.69Vesicle transport protein n=2 Tax=Ectocarpus TaxID... [more]
A0A835Z2J1_9STRA1.760e-5956.36Vesicle transport protein n=1 Tax=Tribonema minus ... [more]
F0YE90_AURAN2.790e-4848.75Vesicle transport protein n=1 Tax=Aureococcus anop... [more]
A0A7S3JV88_9STRA9.690e-4043.51Vesicle transport protein n=1 Tax=Aureoumbra lagun... [more]
A0A5D6Y7U4_9STRA8.190e-3339.38Vesicle transport protein n=1 Tax=Pythium brassicu... [more]
A0A8J2SX58_9STRA4.510e-3242.04Vesicle transport protein n=1 Tax=Pelagomonas calc... [more]
A0A2D4BV73_PYTIN3.850e-3042.75Vesicle transport protein n=2 Tax=Pythium insidios... [more]
A0A1E7FNZ9_9STRA4.370e-2940.77Vesicle transport protein (Fragment) n=1 Tax=Fragi... [more]
A0A662WFW4_9STRA2.950e-2840.44Vesicle transport protein n=2 Tax=Nothophytophthor... [more]
A0A1Z5KRX6_FISSO3.110e-2842.86Vesicle transport protein n=1 Tax=Fistulifera sola... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 50..166
e-value: 8.4E-28
score: 97.1
NoneNo IPR availablePANTHERPTHR23137:SF6VESICLE TRANSPORT PROTEIN SFT2Ccoord: 12..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 12..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig836contigEcto-sp13_S_contig836:17711..18747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig836.19727.1mRNA_Ecto-sp13_S_contig836.19727.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig836 16784..18759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig836.19727.1 ID=prot_Ecto-sp13_S_contig836.19727.1|Name=mRNA_Ecto-sp13_S_contig836.19727.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
MKASSRRLLGGEPEEKSALQEMEEAVCSVCPSLSWRNRLIGYGACLAVGF
CLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMF
NPVRVVATSIYLATLSATLFVALSPYASVPCRGILLLCLVVAQFLSYVWY
TLSYVPFARRFMAGFWSGLRGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR011691Vesicle_transpt_SFT2