prot_Ecto-sp13_S_contig12379.1972.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12379.1972.1
Unique Nameprot_Ecto-sp13_S_contig12379.1972.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length612
Homology
BLAST of mRNA_Ecto-sp13_S_contig12379.1972.1 vs. uniprot
Match: D8LRG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG2_ECTSI)

HSP 1 Score: 857 bits (2215), Expect = 1.080e-301
Identity = 531/613 (86.62%), Postives = 538/613 (87.77%), Query Frame = 0
Query:    1 QDGGRFAFKSAVNLLRSANPDHLDSSYMDRDAFKFVIFRRQEFDIVMDDHLLDEIFARFDPERTGKMAVHRLVQYLLPSKDDCSHHLVPKTDEQGQATKTLLGKVFGMTGKRREMISLNGSGVDDPQGESLLERMAAGDRGDGEKIKAELARKAKAAAVAATAREMAAVEAXXXXXXXXXXXXXXXXXXXXXDNSPLVFNGDLVPTPGATGTAAQHVAAARPETSSTNSGGSSEDAGVGGVXXXXXX-RGGSRQSSTGDVSLREREKRLDAREAALRRREDAIMATDKSDQVSPASVTASTNDAVHSGAANGGRAAARPHPPSRERERPASATALRRYMGDRXXXXXXXXXXXXXXXXXSCRPASAAGRERGTMSGHNNDCRPTNANRSRGVPGTSPRQREEADLIARCRALDAARRKAAATVAAGRQRSTPGDRPHRPEDEVNRAARAVPPRHPGTANDADKRPVSASLPSREVVRQAGETSTSTGRSDGNLTTGGPRAEASGKATGTKAADGAERFPARPQSAF-ARRTADARPPSXXXXXXXSSSRSTGGGVRRSRQERWGSEGRGGIRWNQIERTSQGSDRREEYFDRGVPKHGPSPRPASASLAEGDR 611
            QDGGRFAFKSAVNLLRSANPDHLDSSYMDR+AFKFVIFRR  FDIVMDDHLLDEIFARFDPERTGKMAVHRLVQYLLPSKDDCSHHLVPKTDEQGQATKTLLGKVFGMTGKRREMISLNGSGVDDPQGESLLERMAAGDRGDGEKIKAELARKAKAAAVAATAREMAAVEA           XXXXXXXXX DNSPLVFNGDLVPTPGATGTAAQH AAARPETSSTN             XXXXX  RGGSRQSSTG+ SLREREK LDAREAALRRREDAIMA DKSDQVSPASVT +TN AV SGAANGGRAAARP PPSRERERPASATALRRYMG+      XXXXXXXXXXXX  RPASAAGRERGTMSGHNNDCRPTNANRSRG PG SPRQREEAD IARCRALDAARRKAAATVAAGRQRSTPGDR HRPED VNRAA+AVPPRHPGTANDADKRPVSASLPSRE VRQAGET TSTGR DGNLTTGGPRAEASGKATGT+AA GAER PARPQSA  ARR AD+RPPS XXXXXX    S GGG RR RQERWG EG G IR  QIE  SQGS RREEYFDRGVPKH PSPRPASASLAEGDR
Sbjct:  346 QDGGRFAFKSAVNLLRSANPDHLDSSYMDREAFKFVIFRR--FDIVMDDHLLDEIFARFDPERTGKMAVHRLVQYLLPSKDDCSHHLVPKTDEQGQATKTLLGKVFGMTGKRREMISLNGSGVDDPQGESLLERMAAGDRGDGEKIKAELARKAKAAAVAATAREMAAVEAARSGGPAVTPAXXXXXXXXXRDNSPLVFNGDLVPTPGATGTAAQHAAAARPETSSTNXXXXXXXXXXXXXXXXXXVGRGGSRQSSTGEFSLREREKHLDAREAALRRREDAIMAADKSDQVSPASVT-TTNRAVDSGAANGGRAAARPRPPSRERERPASATALRRYMGN------XXXXXXXXXXXXXXRPASAAGRERGTMSGHNNDCRPTNANRSRGAPGASPRQREEADSIARCRALDAARRKAAATVAAGRQRSTPGDRQHRPEDGVNRAAQAVPPRHPGTANDADKRPVSASLPSREGVRQAGETGTSTGRGDGNLTTGGPRAEASGKATGTEAAGGAERIPARPQSAASARRKADSRPPSGXXXXXXXXXXSAGGGARRPRQERWGGEGGGEIRSKQIEPKSQGSGRREEYFDRGVPKHEPSPRPASASLAEGDR 949          
BLAST of mRNA_Ecto-sp13_S_contig12379.1972.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.890e-33
Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 0
Query:    1 QDGGRFAFKSAVNLLRSANPDHLDSSYMDRDAFKFVIFRRQEFDIVMDDH---------------LLDEIFARFDPERTGKMAVHRLVQYLLPSKDDCSHHLVPKTDEQGQATKTLLGKVFGMTGKRREMISLNGSG 122
            QDGGRFAFKSAVNLLRSANPDHLD +   R A K V+FR  +FDIVMDD                L+D++FA++   RT K+++H+LV+ LLP   D SHHLVPKT  Q  ATKTLL KVF MTGKRR++++LNG+G
Sbjct:  509 QDGGRFAFKSAVNLLRSANPDHLDRTSFTRAAAKMVVFR--QFDIVMDDEWMXXXXXXXXXXXXXLVDQLFAKYADPRTDKISIHKLVRTLLPPAFDGSHHLVPKTSAQQAATKTLLHKVFEMTGKRRDIVNLNGAG 643          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12379.1972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRG2_ECTSI1.080e-30186.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQE8_9STRA1.890e-3357.66EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 334..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12379contigEcto-sp13_S_contig12379:224..4860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12379.1972.1mRNA_Ecto-sp13_S_contig12379.1972.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12379 224..4860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12379.1972.1 ID=prot_Ecto-sp13_S_contig12379.1972.1|Name=mRNA_Ecto-sp13_S_contig12379.1972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=612bp
QDGGRFAFKSAVNLLRSANPDHLDSSYMDRDAFKFVIFRRQEFDIVMDDH
LLDEIFARFDPERTGKMAVHRLVQYLLPSKDDCSHHLVPKTDEQGQATKT
LLGKVFGMTGKRREMISLNGSGVDDPQGESLLERMAAGDRGDGEKIKAEL
ARKAKAAAVAATAREMAAVEAARGGGPAVTPAALAAAAARRRDNSPLVFN
GDLVPTPGATGTAAQHVAAARPETSSTNSGGSSEDAGVGGVGGGGVGRGG
SRQSSTGDVSLREREKRLDAREAALRRREDAIMATDKSDQVSPASVTAST
NDAVHSGAANGGRAAARPHPPSRERERPASATALRRYMGDRRQQQQQQQQ
QQQQRRSSSCRPASAAGRERGTMSGHNNDCRPTNANRSRGVPGTSPRQRE
EADLIARCRALDAARRKAAATVAAGRQRSTPGDRPHRPEDEVNRAARAVP
PRHPGTANDADKRPVSASLPSREVVRQAGETSTSTGRSDGNLTTGGPRAE
ASGKATGTKAADGAERFPARPQSAFARRTADARPPSGARPQSASSSRSTG
GGVRRSRQERWGSEGRGGIRWNQIERTSQGSDRREEYFDRGVPKHGPSPR
PASASLAEGDR*
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