prot_Ecto-sp13_S_contig8356.19719.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8356.19719.1
Unique Nameprot_Ecto-sp13_S_contig8356.19719.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length451
Homology
BLAST of mRNA_Ecto-sp13_S_contig8356.19719.1 vs. uniprot
Match: A0A6H5K438_9PHAE (Herpes_ori_bp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K438_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 4.400e-82
Identity = 179/494 (36.23%), Postives = 259/494 (52.43%), Query Frame = 0
Query:    7 CGRTFWKTQAAMFKHAKKAQ-----ILIKFTPKLFTYFDSFCVFLEWFKKMRKICKQKKRPLEVYEILSSGMTMCFACDIEVYCPFNISNSDFERVQHTLKQRFIQVYNKYGDGSNVVFMENHRASSYKPEGSDTAKKMKKLSFHALGLSEIFNEMHTTCEM---------------------------------------NRALRSIYGQKDANSGAFKLSKGSEHVLLQNCFVTRHFCDEVTLYTLPEDLQCVETSAKPAKQKRVPRNTPKR---HRTDGTTADTTATELRIQKYLEQIFGDKVTVKYQGLYNNRASYRADGHR-HCPRCKQEHFRNGAYINDLGGGNFYYKCLSNPEDKASQKLVYIDMNTVESGEAVERCTTTDETTGYLESFTHVTKKVISISGPMGCGKTYQIKKFLECFPPGTRILFLTCRKGMARSLAGRFQGFVVYLDETNQPLQIQEYEFVNRIT-TDYPIIVIDELRSMLTSA 451
            CG+ F++ Q  M             I +      FT+F++F  F EW+ + ++ C + +R   VYEIL +G  MCF  D+EVYCP     +  +++++T+K  F + Y KY D  N+V  +N R S +K +G +  + M K+S H LG SEIFNE+HT+CEM                                       NR +  I   K    GAF+ ++ S+HV +++C VT+ F  +V+ + LP+ L+  +        K+  RN P R   HR    T +T+ TEL +  YL   FGD VTV + G+Y  + SY   GHR  CP C+  H  NGA++  LG   F YKC+ NP    + +L   + + V+  E  E      E   YL SFTHV  KVISI  PM  GKT+QI++ ++   P  R+L +TCR+GMA +L GRF GF  Y D  N+  QI EYE ++R++   Y +I++DELRS L SA
Sbjct:    5 CGKWFYRKQDEMLASVPAEDDVAIYIKVMVDRFYFTWFETFDEFWEWYFRAQEECNRNQRAFSVYEILRTGRDMCFIADLEVYCPPETHWTQLQKIEYTIKNLFREAYGKYADAENLVITQNSRMSEHKEKGGEK-EPMYKISLHFLGRSEIFNEIHTSCEMKALAEHVKTALVADMQPLVAKHDIVLPDGNVLDLGIYTRNRPMSLIGTAKKLGGGAFERTEESKHVPIRSCIVTQQFTRDVSYFELPDGLEVTK--------KKTKRNIPTRRLVHRP--RTRETSETELLLLNYLCTKFGDSVTVTHNGVYGGQDSYAVRGHRAFCPCCEDSHDSNGAFLTHLGELFFRYKCM-NPHAPRTVELDLREFHCVQEPEGPEE----QEKPRYLPSFTHVKSKVISICAPMRSGKTFQIERDIDHKDP-PRVLVITCRRGMAATLTGRFSGFTNYQDGINKDRQIIEYESLHRLSWIKYDMIIMDELRSTLNSA 481          
BLAST of mRNA_Ecto-sp13_S_contig8356.19719.1 vs. uniprot
Match: B2KWI9_ECTSI (Origin-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI9_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 3.500e-27
Identity = 136/514 (26.46%), Postives = 205/514 (39.88%), Query Frame = 0
Query:    6 ICGRTFWKTQAAMFKHAK--KAQILIKFTPKLFTYFDSFCVFLEWFKKMRKICKQKKRPLEVYEILSSGMTMCFACDIEVYCPFNISNSDFERVQHTLKQRFIQVYNKYG---DGSNVVFMENHRASSYKPEGSDTAKKMKKLSFHALGLSEIFN-------------EMHTTCEM----------------------------NRALRSIYGQKDANSGAFKLSKGSEHVLLQNCFVTRHFCDEVTLYTLPEDLQCVETSAKPAKQKRVPRNTPKRHRTDGTTADTTATELRIQKYLEQIFG-DKVTVKYQGLYNNRA--SYRADGH-RHCPRCKQEHFRNGAYINDLGGGNFYYKCLSNPEDKASQKLVYIDMNTVESGEAVERCTTTDETTGYLESFTHVTKKVISISGPMGCGKTYQIKKFLECF------------------PPGTRILFLTCRKGMARSLAGRFQGFVVYLDETNQPLQIQEYEFVNRITTDYPIIVIDELRSMLTSA 451
            I G+ F   Q       K  K   +IK+   +F  F S    L W+    K  ++  +P E YE++       F  DIEVYCP      D      +LK R +          D   +++ E+HR +          K   K+SFH +G S +F              E++T  E                             NR++R     K   S  F    GSE   L++ F+    C ++ +     D   V  + K +KQ+R       + R    T   +  E +IQ YL      D + V + GLY  +   SYR DG  R C  C + H RNGA++ +L      Y C+S+   +    ++ I    +++ + ++     D   G +     +  K I+I   M  GKTY+  + +E                    P   R+L +TCR  MA  L  RF+GF  Y D  +    I EYE ++R    Y II+IDE+RS+LTSA
Sbjct:   11 INGKKFISNQDMSLPAGKGHKKVFMIKWGQYMFACFTSRKEQLAWWTNTHKKMQKSGKPFEAYEVIYGEFPCSFFADIEVYCPLKADYID------SLKARIVSDVTSRCEELDEHLLLWSEDHRET----------KGFYKISFHVVGGSRLFRGIVTNGPMARLAAEVNTISEKIFEDYPDISSSPREQREMSVLDMGVYTKNRSMRGPKASKGVGSQGFLPCAGSEGGDLEDFFI----CKDIPMDDY-RDYDFVPNTIKESKQQRAIAVDKIQTRKVAPTTAQSDLESQIQCYLRATQNTDTIKVVFNGLYGAQQLPSYRVDGSGRSCHVCDKVHGRNGAFVKELPTKALLYTCMSSMRSE----ILPIFGRVLKTAKVLDTINPED---GRVPDIRTIKDKCINIIAGMNTGKTYRANQLVEALGETLAAKTRVDDPGKSMPPRKLRVLIVTCRVSMASGLDFRFKGFDQYTDTIDSDRLIIEYESLHRTDRLYDIIIIDEVRSVLTSA 496          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8356.19719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K438_9PHAE4.400e-8236.23Herpes_ori_bp domain-containing protein n=1 Tax=Ec... [more]
B2KWI9_ECTSI3.500e-2726.46Origin-binding protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 341..444
e-value: 3.7E-6
score: 28.2
IPR003450Replication origin-binding proteinPFAMPF02399Herpes_ori_bpcoord: 346..448
e-value: 4.1E-8
score: 31.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 359..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8356contigEcto-sp13_S_contig8356:3129..4598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8356.19719.1mRNA_Ecto-sp13_S_contig8356.19719.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8356 3129..4623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8356.19719.1 ID=prot_Ecto-sp13_S_contig8356.19719.1|Name=mRNA_Ecto-sp13_S_contig8356.19719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp
MSTINICGRTFWKTQAAMFKHAKKAQILIKFTPKLFTYFDSFCVFLEWFK
KMRKICKQKKRPLEVYEILSSGMTMCFACDIEVYCPFNISNSDFERVQHT
LKQRFIQVYNKYGDGSNVVFMENHRASSYKPEGSDTAKKMKKLSFHALGL
SEIFNEMHTTCEMNRALRSIYGQKDANSGAFKLSKGSEHVLLQNCFVTRH
FCDEVTLYTLPEDLQCVETSAKPAKQKRVPRNTPKRHRTDGTTADTTATE
LRIQKYLEQIFGDKVTVKYQGLYNNRASYRADGHRHCPRCKQEHFRNGAY
INDLGGGNFYYKCLSNPEDKASQKLVYIDMNTVESGEAVERCTTTDETTG
YLESFTHVTKKVISISGPMGCGKTYQIKKFLECFPPGTRILFLTCRKGMA
RSLAGRFQGFVVYLDETNQPLQIQEYEFVNRITTDYPIIVIDELRSMLTS
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003450Replication_origin-bd
IPR027417P-loop_NTPase