prot_Ecto-sp13_S_contig12375.1971.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12375.1971.1
Unique Nameprot_Ecto-sp13_S_contig12375.1971.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A6H5K2V6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2V6_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 2.150e-98
Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 0
Query:    1 MGRMGKMSPSRGQAAWTMLPSPSTPSARFARDASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPDKPEVD 158
            M RMG  SPSRGQAAW MLPSPSTPSARFARDASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACR+LGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPDKPEVD
Sbjct:    1 MDRMGTTSPSRGQAAWAMLPSPSTPSARFARDASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRMLGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPDKPEVD 158          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.030e-33
Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 0
Query:   27 ARFARDASAGLK------ARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGA 151
            A  AR A+A         A+ W+E V   +  EG FAA  KDG  LC+L+N  RP ++ KI  S+ PF QM NIS++LK CR LGV+EH LFET+DL+ E  +  V++CLF+L   +++++P +HGP+LGA
Sbjct:   13 AELARKAAANYDYAGEHAAQEWIEAVTRVKF-EGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHLGA 142          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.780e-30
Identity = 60/120 (50.00%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   32 DASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGA 151
            D SA  +AR W+E V G R+  G F    +DG  +C+LVNT +P ++ KI  S  PF QM NIS+FLK+CR +GV+EH LFET+DL+    +  VVRC+F+L   V+ T P Y GP LGA
Sbjct:   26 DHSAEDQARAWIEAVTGERVV-GPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFETVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTLGA 144          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.780e-30
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0
Query:   32 DASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPD 153
            D  A   A+ W+E V G     GDF    KDGQ LC LVN  R  S+ KI  S  PF QM NIS+FL+ACR LGV+EH +FET+DLF    L  VV+C+++L   V+TT+P + GP+LG P+
Sbjct:   11 DPEAMQDAQEWIEAVTGVAFA-GDFGESLKDGQMLCMLVNAIRRGSVRKINESKLPFKQMENISNFLRACRTLGVAEHDVFETVDLFELKDLSVVVKCIWALGRAVQTTVPEFEGPHLGVPE 131          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A7S2MR69_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MR69_9DINO)

HSP 1 Score: 114 bits (285), Expect = 2.000e-29
Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = 0
Query:   42 WVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPD 153
            WVEE+ G  +  GDF    + G+ LC LVN  RP  + K+  +  PF +  NIS+FLKACR LGV E+ LF T DL++EN L  VVRCL++L   V+ T+P + GP LG  D
Sbjct:    3 WVEEITGEPVV-GDFVGALRTGEVLCRLVNRLRPGIVQKVNTAGMPFRERENISNFLKACRALGVQEYALFSTDDLYDENNLLSVVRCLYALGGAVQRTVPDFQGPRLGVAD 113          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A7S4QYJ9_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QYJ9_9DINO)

HSP 1 Score: 119 bits (298), Expect = 1.650e-28
Identity = 54/122 (44.26%), Postives = 80/122 (65.57%), Query Frame = 0
Query:   32 DASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPD 153
            DA+A  +A  W++E+ G  + E DF    + G+ LC LVN  RP S+ K+  + +PF +  NIS+FLKACR +GV E+ LF T DL++EN L  VVRC+++L   ++ T+P + GP+LG  D
Sbjct:  369 DAAAEEEAAQWIQEITGECVKE-DFFGALRTGEVLCRLVNHIRPGSVAKVNAAGAPFRERENISNFLKACRAMGVQEYALFSTDDLYDENNLLSVVRCVYALGGAIQRTVPEFQGPHLGVAD 489          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A6A3WDR1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WDR1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.020e-27
Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   38 KARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLG 150
            +A+ W+E V+G +     F    KDG  LC L+N  +P  IPKI+ S+ PF QM N+SSF++ACR +GV+E  LFET+DLFN+  + QVV+C+ +L   ++ TMP Y GP LG
Sbjct:  297 EAQEWIEAVLGEKFL-ASFGDSLKDGVILCTLMNKIQPGLIPKIQSSSMPFKQMENVSSFVRACRAIGVAEFDLFETVDLFNQKNIGQVVQCIHALGRTIQKTMPEYDGPRLG 408          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A0W8CZ75_PHYNI (Luc7 protein 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CZ75_PHYNI)

HSP 1 Score: 117 bits (292), Expect = 1.040e-27
Identity = 53/117 (45.30%), Postives = 79/117 (67.52%), Query Frame = 0
Query:   34 SAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLG 150
            +A  +A+ W+E V+G +     F    KDG  LC L+N  +P  IP+I+ S+ PF QM N+S+F++ACR +GV+E  LFET+DL+N+  L QVV+C+ +L   ++ TMP Y+GP LG
Sbjct:  290 TAEEEAQEWIEAVLGEKFL-ASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLG 405          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: W2NFZ0_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2NFZ0_PHYPR)

HSP 1 Score: 117 bits (292), Expect = 1.370e-27
Identity = 53/117 (45.30%), Postives = 79/117 (67.52%), Query Frame = 0
Query:   34 SAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLG 150
            +A  +A+ W+E V+G +     F    KDG  LC L+N  +P  IP+I+ S+ PF QM N+S+F++ACR +GV+E  LFET+DL+N+  L QVV+C+ +L   ++ TMP Y+GP LG
Sbjct:  290 TAEEEAQEWIEAVLGEKFL-ASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLG 405          
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.480e-27
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 0
Query:   32 DASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLG 150
            D      A+ W+E+V G R  EG F    KDG+ LC L+N  +P ++ ++  S  PF QM N+S+FLKACR +GV+EH LFET+DL+    L  VVRCL +L + V+ + P Y+GP LG
Sbjct:  361 DXXXXXXAQEWIEDVTGERFAEG-FGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFETVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLG 478          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12375.1971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2V6_9PHAE2.150e-9896.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGB8_9STRA3.030e-3346.56Calponin homology domain-containing protein n=1 Ta... [more]
D7FJ16_ECTSI1.780e-3050.00Calponin-homology (CH) domain-containing protein n... [more]
A0A7R9YD67_9STRA2.780e-3050.00Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2MR69_9DINO2.000e-2948.21Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A7S4QYJ9_9DINO1.650e-2844.26Hypothetical protein n=2 Tax=Alexandrium monilatum... [more]
A0A6A3WDR1_9STRA1.020e-2747.79Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A0W8CZ75_PHYNI1.040e-2745.30Luc7 protein 3 n=1 Tax=Phytophthora nicotianae Tax... [more]
W2NFZ0_PHYPR1.370e-2745.30Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A6H5L3X7_9PHAE1.480e-2746.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 126..140
score: 32.16
coord: 56..71
score: 53.31
coord: 89..105
score: 45.33
coord: 31..44
score: 25.63
coord: 105..120
score: 44.49
IPR001997Calponin/LIMCH1PRINTSPR00889CALPONINcoord: 37..51
score: 39.33
coord: 67..84
score: 46.11
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 35..133
e-value: 2.2E-15
score: 67.1
IPR001715Calponin homology domainPFAMPF00307CHcoord: 40..135
e-value: 5.9E-18
score: 65.0
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 33..138
score: 18.062
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 28..144
e-value: 5.6E-33
score: 115.3
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 38..140
NoneNo IPR availablePANTHERPTHR46756FAMILY NOT NAMEDcoord: 29..139
NoneNo IPR availablePANTHERPTHR46756:SF6coord: 29..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12375contigEcto-sp13_S_contig12375:2135..3145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12375.1971.1mRNA_Ecto-sp13_S_contig12375.1971.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12375 2135..3343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12375.1971.1 ID=prot_Ecto-sp13_S_contig12375.1971.1|Name=mRNA_Ecto-sp13_S_contig12375.1971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
MGRMGKMSPSRGQAAWTMLPSPSTPSARFARDASAGLKARHWVEEVIGRR
LPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKA
CRILGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLG
APDKPEVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001997Calponin/LIMCH1
IPR001715CH-domain
IPR036872CH_dom_sf