mRNA_Ecto-sp13_S_contig83532.19714.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LU07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU07_ECTSI) HSP 1 Score: 128 bits (322), Expect = 9.920e-35 Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDGGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMVKIM SPASLQQSA ADCD DAIA GA+W + SER+QLP PSTCTFWCAIALGALAEGSPI+S+ KYSELAQEALA+S
Sbjct: 26 RETMVKIMRSPASLQQSAVEADCDDERSYDAIARGAHWIQASERNQLPRDPSTCTFWCAIALGALAEGSPIQSVYKYSELAQEALATS 113
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 112 bits (281), Expect = 5.010e-28 Identity = 58/89 (65.17%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCD-GGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMV IM AS QQS G DCD GG + +A+APG + +KTS R+Q PM PS CTFWCA+ALGALA+GSPIES+ Y++LAQEALA S
Sbjct: 49 RETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALAKS 137
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 107 bits (268), Expect = 1.890e-25 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCD-GGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMVKIM PAS QQ G DCD GG + +A+A G + +KTS ++LPM PS CTFWCA+ALGALA+GSPIES+ Y+ LAQ ALA+S
Sbjct: 26 RETMVKIMLPPASSQQPVLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGALAKGSPIESVTSYARLAQAALANS 114
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 105 bits (263), Expect = 5.950e-25 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDGGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RE MV+IM +PA+LQ+ A G CD + DAIA G + SE HQ PM P +CTFWCAIALGALA+GSP ES+AKYS+LA EALA S
Sbjct: 144 REAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKS 231
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 103 bits (257), Expect = 7.750e-25 Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDG-GSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMVKIM PAS QQS G D G + +A+APG + +K S QLPM PS CTFWCA+ALGAL +GSPIES+ Y++LAQEALA S
Sbjct: 45 RETMVKIMVPPASSQQSVFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALAKS 133
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 105 bits (263), Expect = 1.110e-24 Identity = 57/88 (64.77%), Postives = 64/88 (72.73%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDGGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMV+IM SPA LQQSA G C S V + WN+ SER+QLPM STCTFWCAIALGALA+GSP+ES+AKY LA EAL S
Sbjct: 149 RETMVRIMASPAPLQQSAIGGAC---SEVGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKS 233
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 105 bits (261), Expect = 1.760e-24 Identity = 60/89 (67.42%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDG-GSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMVKIM SPA LQQSA G G GS V A WNK SE+ QLPM PSTCTFWCAIALGALA+G P+ES+AKY LA EAL S
Sbjct: 45 RETMVKIMASPAPLQQSAIGGAFGGVGSMVRARC----WNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKS 129
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LU05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU05_ECTSI) HSP 1 Score: 103 bits (256), Expect = 7.520e-24 Identity = 56/73 (76.71%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDGGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIES 219
RETMVKIMT P+SLQQSA GAD VD APGAN K SER+QLPM PSTCTFWCAIALGALA+GSPIES
Sbjct: 26 RETMVKIMTPPSSLQQSAVGAD---ERSVDTNAPGANLIKASERNQLPMDPSTCTFWCAIALGALAKGSPIES 95
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D8LCU9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU9_ECTSI) HSP 1 Score: 103 bits (256), Expect = 9.670e-24 Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDGGS-FVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
RETMVKIM PAS QQ G +CD G + +A+APG + +K S +QL M PS CTFWCA+ALGAL +GSPIES+ Y++LA+EALA+S
Sbjct: 85 RETMVKIMLPPASSQQPVLGDNCDEGERYFEAVAPGGDLSKISAGNQLAMDPSACTFWCAVALGALVKGSPIESVTSYAQLAEEALANS 173
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Match: D7FZI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI7_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.070e-23 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 1 RETMVKIMTSPASLQQSASGADCDGGSFVDAIAPGANWNKTSERHQLPMGPSTCTFWCAIALGALAEGSPIESLAKYSELAQEALASS 264
R +MVKIMT+ LQ SA G D DAI GA+W+K SE HQ+PM PS+CTFWCAIALGAL +G PI S+ KYS+LA EALA S
Sbjct: 26 RASMVKIMTT---LQSSAVGGDFGEQGRFDAIVRGADWSKASEGHQIPMNPSSCTFWCAIALGALVKGHPIGSVTKYSQLAHEALAKS 110 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83532.19714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig83532.19714.1 >prot_Ecto-sp13_S_contig83532.19714.1 ID=prot_Ecto-sp13_S_contig83532.19714.1|Name=mRNA_Ecto-sp13_S_contig83532.19714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp MVKIMTSPASLQQSASGADCDGGSFVDAIAPGANWNKTSERHQLPMGPSTback to top mRNA from alignment at Ecto-sp13_S_contig83532:4..465- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig83532.19714.1 ID=mRNA_Ecto-sp13_S_contig83532.19714.1|Name=mRNA_Ecto-sp13_S_contig83532.19714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig83532:4..465- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig83532:4..465- >mRNA_Ecto-sp13_S_contig83532.19714.1 ID=mRNA_Ecto-sp13_S_contig83532.19714.1|Name=mRNA_Ecto-sp13_S_contig83532.19714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig83532:4..465- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |