mRNA_Ecto-sp13_S_contig8351.19713.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8351.19713.1
Unique NamemRNA_Ecto-sp13_S_contig8351.19713.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A6H5JR35_9PHAE (Riboflavin kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR35_9PHAE)

HSP 1 Score: 623 bits (1607), Expect = 1.190e-214
Identity = 326/376 (86.70%), Postives = 335/376 (89.10%), Query Frame = 1
Query:    1 QMGTVFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGATAAKTGEAGGERAKGAGAKSAAKTADEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFSGMPAATGERSTTAEAWSTRDFEAAMEEAARGADK 1128
            +MGT FKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGA AA                       EEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPE+DALERLVQFLPLV+DSFESGPELYLAVLRKTPHRASG VRYLRG VSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGA+++EGEGD             GPWKCVANVGYSPTFAGQENAEKIVEGHL+GYEGEDFYGRT+RMLLAGFQRREKKFASFPELVATINKDVRDAAAAL+EPRFSAFKADAFFSG PAATGERSTTAEAWSTRDFEAAMEEAARGADK
Sbjct:  142 EMGTAFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGAAAAXXXXXXXXXXXXXXXXXXXXXXXEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPEQDALERLVQFLPLVMDSFESGPELYLAVLRKTPHRASGTVRYLRGKVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGAATKEGEGDEGDASGGGRDGGEGPWKCVANVGYSPTFAGQENAEKIVEGHLIGYEGEDFYGRTIRMLLAGFQRREKKFASFPELVATINKDVRDAAAALNEPRFSAFKADAFFSGRPAATGERSTTAEAWSTRDFEAAMEEAARGADK 517          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S2XYQ3_9STRA (Riboflavin kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ3_9STRA)

HSP 1 Score: 244 bits (622), Expect = 9.270e-68
Identity = 135/263 (51.33%), Postives = 171/263 (65.02%), Query Frame = 1
Query:  232 VGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGP---ELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAEN-LRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFK 1008
            VG + FNAVFGNLWDQ AAL     +L  GG VVISHP+G  FV  LK  D+ +VPH LP ++ LE +V  LPL I SFE      +LYLAVL++ P     ++  LRG V+ GYGRGS+KLG+PTANLPES F  + L  +P GVY GWA +E    + G G              GP+K V N+G+SPTF G+EN EKIVE HLV    EDFY + MR++L GF+R EKKF+SFPEL+A I +DV+D + ALD  +F + +
Sbjct:  291 VGAIFFNAVFGNLWDQPAALAHCCELLPTGGNVVISHPMGSTFVKMLKKKDNRLVPHLLPTQEQLEAMVANLPLEIKSFEGKDGVKDLYLAVLQRVPVSPLTKLLCLRGKVAHGYGRGSRKLGIPTANLPESNFLTSALGDVPAGVYCGWALVE----QNGNG-----------AHKGPFKAVVNIGFSPTFEGKENPEKIVEAHLVHDFEEDFYDKQMRLVLVGFKRFEKKFSSFPELLANIRQDVKDCSEALDCEQFKSIQ 538          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S3Q9G1_9STRA (Riboflavin kinase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9G1_9STRA)

HSP 1 Score: 230 bits (586), Expect = 5.000e-63
Identity = 129/274 (47.08%), Postives = 165/274 (60.22%), Query Frame = 1
Query:  241 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSF----------ESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGE---DFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFF 1023
            VV NA FGN  DQ + +  AAN L+E G  +ISHPLG  FV +LK+ + + VP+ LP +   + L+QF PL  ++F          ES   LY A  +K PH  +  V  LRG V TG+GRG KKLGVPTANLP S F   L  +PTGVYFGWA ++G        D                K V NVGYSPTF G+EN EKIVE HL+  + +   DFYG TM++ L GF R E+KFASFP+L+A IN+DV +A ++LD   +S F +D+FF
Sbjct:  234 VVINACFGNFLDQDSVVTAAANSLKEDGCFIISHPLGAGFVEKLKSENPSTVPNLLPSQTEFDELLQFQPLRRENFMEEAQLSENAESATALYFASAKKIPHLLTREVLRLRGKVDTGFGRGGKKLGVPTANLPSSLFQNALENVPTGVYFGWALIKGDDQSSKGRDVIH-------------KAVVNVGYSPTFDGEENKEKIVEAHLIVGDDDIEGDFYGETMKLGLCGFLRSERKFASFPDLIAAINRDVNNAKSSLDLAPYSTFCSDSFF 494          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A836CMR2_9STRA (Riboflavin kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMR2_9STRA)

HSP 1 Score: 224 bits (571), Expect = 7.550e-63
Identity = 145/347 (41.79%), Postives = 181/347 (52.16%), Query Frame = 1
Query:    1 QMGTVFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGATAAKTGEAGGERAKGAGAKSAAKTADEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLP---ESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYE---GEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFF 1023
            +M  VF+ R+P +++   +FV Y                     T  K  EA                 D+EEE   V +VVFNA F NL+D  A L+ A ++L EGG VVISHPLG     +L A D  +VPH LP   AL R+ + LPL +D++     LYLA L +  H          G V  G+GRG KKLGVPTANL    +    + L  LPTGVY GWA +E    E+G G               P K V NVG+SPTF  + N EKI+E HL+G +     DFYG  MR+LLAGF R E++FA FP+LVA I KDV DAAAALD   + A    AFF
Sbjct:   26 KMLDVFQQRYPGTQVFCGDFVEYVPP------------------TLPKENEA-----------------DDEEELSKVQSVVFNACFANLYDPAAHLQHACDVLSEGGTVVISHPLGSACTEKLHARDARMVPHALPAEAALRRMARHLPLRVDAWRDRDGLYLAALTRVRHALLRDFVCAYGAVGRGFGRGGKKLGVPTANLQPDGDGPLRQGLADLPTGVYIGWALVE----EDGAGAGSSSAQR-------PVKAVVNVGFSPTFE-ERNPEKIIEAHLIGRDPATSGDFYGAPMRLLLAGFLRPERRFAGFPQLVAAIRKDVADAAAALDTEPYRALAEHAFF 325          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S4JE57_GUITH (Riboflavin kinase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JE57_GUITH)

HSP 1 Score: 226 bits (576), Expect = 4.210e-62
Identity = 127/296 (42.91%), Postives = 173/296 (58.45%), Query Frame = 1
Query:  229 GVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFSGMPAATGERSTTAEAWSTRDFEAAMEEAAR 1116
            GV  + FN+V     D    L+ +A++L  GG+VV+SHPLG  FVS +K   + +  ++LP  D L+ LV+ LPL +D F S  ELY+A L + P+ A  +V  +RG V++G+GRG KKLG+PTANLPES FA+ LR + TGVY GWA + G S +                     K V NVGYSPTF G EN EK+VE HL+     DFYG+ MR++L GF R E KF SFPEL+  I+KD+ ++  ALD   FS   A  F         + ++  EAW    ++ A++ A R
Sbjct:  209 GVDVIFFNSVISTFTDLQDPLKVSASLLNPGGRVVVSHPLGSPFVSEMKKSMEELYLNDLPAVDQLQLLVKHLPLKVDKFVSEDELYIARLVQRPYHALEKVMCMRGDVASGWGRGGKKLGIPTANLPESMFADALREVQTGVYLGWAQIGGVSKKS-------------------VKAVVNVGYSPTFVGAENREKVVEAHLLEKFENDFYGKEMRLMLTGFLRPETKFDSFPELLEAIHKDIENSREALDTEEFSVLSAHPFL--------QETSDYEAWQQIAYDDAVKAAGR 477          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S1FTC5_9STRA (Riboflavin kinase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTC5_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.800e-58
Identity = 132/299 (44.15%), Postives = 164/299 (54.85%), Query Frame = 1
Query:  208 DEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPE---------------------LYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALE----GASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGE---DFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAF 1020
            DE +E      VV NA FGN +D  + L   +++L EGG + I+HPLG DFV  L   D   VPH LP+  AL  L++  PL I  F S  +                     LY A  R+ PHRA  ++   RG V+TGYGRG K LGVPTANLP S F + L   PTGVYFGWA +E    G + ++G                   + V NVG+SPTF G+ENAEKIVE HL+  EG+   DFY  TMR+ L G  R EKKF SFP L A I  D+ +A  ALD P+F+A +AD F
Sbjct:  331 DENKEERKFDAVVINACFGNFFDLDSLLATTSSVLGEGGILAITHPLGSDFVKSLHEADPGSVPHNLPDLPALRSLLRHHPLNIVDFVSDGDVSRATLEGDAKGTGNPLDRIPLYYAAARRVPHRALKKIMRFRGPVATGYGRGGKALGVPTANLPASAFGDALLDFPTGVYFGWAVIESGRPGKTPKKGRATHH--------------RAVVNVGFSPTFEGKENAEKIVEAHLIVDEGDILGDFYNETMRLSLVGQLRGEKKFPSFPALKAAIENDIINADDALDAPQFAALRADPF 615          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S2WP52_9STRA (Riboflavin kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP52_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.260e-57
Identity = 134/296 (45.27%), Postives = 161/296 (54.39%), Query Frame = 1
Query:  241 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLP---LVIDSFESGPE----------LYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEG--EDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFK-ADAFFSGMPAATGERSTTAEAWST 1080
            VV N+ F N + Q  AL  AA  L+ GG+ +ISHPLG   VS L+  D  VVPHELP R  L+RLVQ+ P   L ++     PE           YLA LR+  H+   +   LRG V++G+GRGS+KLG PTANLP S F   L  L TGVY GWA +EG S   G G                   V N+GYSPTFAG+EN EKIVE HL+G  G   DFYG TMR+ L GFQR E KF  F  LVA I++DV DA  AL E  F   K A+ +  G             +W T
Sbjct:  203 VVMNSCFANFFSQEEALASAATFLKNGGECIISHPLGEPCVSALRERDAAVVPHELPTRRGLDRLVQYQPFQVLQVEDVRGDPEDPFNADSSSGFYLARLRRVAHQTLHQRLCLRGQVASGFGRGSRKLGFPTANLPSSLFDTALEGLQTGVYCGWALVEG-SGRPGFGVAHP--------------AVVNIGYSPTFAGEENPEKIVEAHLIGDCGFDSDFYGETMRLCLVGFQRSEMKFPDFGTLVAQISQDVEDAKVALQEELFIQVKDAEEWLDGAATIKDSEGLQGASWKT 483          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A8J6C5Q3_DIALT (Riboflavin kinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Q3_DIALT)

HSP 1 Score: 209 bits (531), Expect = 2.290e-55
Identity = 140/300 (46.67%), Postives = 164/300 (54.67%), Query Frame = 1
Query:  205 ADEEEEAGGVGT---VVFNAVFGNLWDQGAALERAANILE-EGGKVVISHPLGRDFVSRLKAVDDTVVPHELP-ERDALERLVQFLPLVIDSFES----------GPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLV--GYEGED-----------FYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAF 1020
            AD E  AG  G    VVFNA FGN+     AL  A       GG+VVI+HPLGR FVSRL+A D  VVPHELP +  AL  L + LPL + + +           G   Y A+L +   R   RV  LRG VS GYGRGS +LGVPTANL E  FA  L  +PTGVY GWA +EGA+   GE                  + V NVGYSPTFAG ENA+KIVE HL+  G  G +           FYG  MR+LL  F R E KF SFP L+A I+KDV +AA  L E   + F  D F
Sbjct:  189 ADAEAAAGRGGAFDAVVFNACFGNMHSPRLALRAACTAARPSGGRVVIAHPLGRAFVSRLRAEDAAVVPHELPADARALAELAEGLPLRLVALDDEAPADGAGGGGDGFYCALLERWLPRPLPRVMLLRGEVSRGYGRGSAQLGVPTANLREQDFAGELAHVPTGVYAGWAVIEGAAGRAGEVVH---------------RAVVNVGYSPTFAGAENAQKIVEAHLLPGGPSGRENGGGALFAPASFYGAQMRLLLCAFVRPEHKFESFPLLLAAIHKDVDEAARVLSEDELAPFARDPF 473          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A1Z5KTL7_FISSO (Riboflavin kinase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTL7_FISSO)

HSP 1 Score: 203 bits (517), Expect = 6.710e-54
Identity = 127/305 (41.64%), Postives = 165/305 (54.10%), Query Frame = 1
Query:  241 VVFNAVFGNLWDQGAALERAANILEE------GGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPEL-------YLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEG-EDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFS-GMPAATGERSTTAEA-WSTRDFEAAMEE 1107
            +V NA FGN W+    LERAA +L+       GG + I+HPLG +FV++L       VPH LP+++ L  + +FLPL +   +    L       Y   L +  H    ++   RG V++GYGRG KKLG PTANL  + F + L T+PTGVYFGWA +EG ++                      K V NVG+SPTF G ENAEKIVE HL+  E  +DFYG TMR+ L GF R E KF SFP LVA I  D ++A  ALD   +S  K+D F     P   G      +A W  +D   A+EE
Sbjct:  185 IVMNACFGNFWNSLDVLERAAQLLKPPTPQTPGGLLFITHPLGAEFVAQLHQETPETVPHCLPDQEQLIHMTRFLPLQLIDLQKSVSLTGEAQPFYCGTLERVRHCCLPQLMRFRGPVASGYGRGGKKLGFPTANLEPALFRKALETVPTGVYFGWAVIEGRNACH--------------------KAVVNVGFSPTFEGAENAEKIVEAHLLLEESIDDFYGETMRLQLHGFLRPEIKFDSFPALVAQITADAKEAKEALDLRPYSTLKSDTFLEINNPTWIGNIGGDDQASWEFQDSNEAIEE 469          
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S3L497_9STRA (Riboflavin kinase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L497_9STRA)

HSP 1 Score: 201 bits (512), Expect = 6.710e-53
Identity = 125/269 (46.47%), Postives = 153/269 (56.88%), Query Frame = 1
Query:  241 VVFNAVFGNLWDQGAALERAANIL--EEGGKVVISHPLGRDFVSRLKAVDDTVVPHELP-ERDALERLVQFLPLVID----SFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGE--DFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAF 1020
            V+ NA FGN W+  A LE     L  ++GG V++SHPLG +FV +L   D T VPH LP   D    + ++LPL +     SFES P  Y A L++  H A   V  LRG V+TG+GRG KKLG PTANL   +    L ++ TGVYFGWA +EG S                    G  K V NVG+SPTF G+ENAEKIVE HL+  E E  DFY  TMR+ L GF R E KF SFP L+A I++D  +A  ALD     AF  D F
Sbjct:  223 VILNACFGNFWNTSAVLEHICLRLLKQKGGSVIVSHPLGSNFVEKLNREDPTTVPHLLPASSDEWSVMTRYLPLELKKMDFSFESNP-YYFAWLQRVRHVALPNVMRLRGKVATGFGRGGKKLGFPTANLSPVEMRPALESVETGVYFGWAVIEGRS--------------------GIHKAVVNVGFSPTFEGKENAEKIVEAHLLFGEEEVKDFYSETMRLQLHGFLRPEIKFPSFPALIAQISEDRDEARGALDVEPSVAFSKDPF 470          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR35_9PHAE1.190e-21486.70Riboflavin kinase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S2XYQ3_9STRA9.270e-6851.33Riboflavin kinase n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A7S3Q9G1_9STRA5.000e-6347.08Riboflavin kinase n=1 Tax=Chaetoceros debilis TaxI... [more]
A0A836CMR2_9STRA7.550e-6341.79Riboflavin kinase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4JE57_GUITH4.210e-6242.91Riboflavin kinase n=1 Tax=Guillardia theta TaxID=5... [more]
A0A7S1FTC5_9STRA6.800e-5844.15Riboflavin kinase n=1 Tax=Corethron hystrix TaxID=... [more]
A0A7S2WP52_9STRA4.260e-5745.27Riboflavin kinase n=1 Tax=Rhizochromulina marina T... [more]
A0A8J6C5Q3_DIALT2.290e-5546.67Riboflavin kinase n=1 Tax=Diacronema lutheri TaxID... [more]
A0A1Z5KTL7_FISSO6.710e-5441.64Riboflavin kinase n=1 Tax=Fistulifera solaris TaxI... [more]
A0A7S3L497_9STRA6.710e-5346.47Riboflavin kinase n=1 Tax=Amphora coffeiformis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8351contigEcto-sp13_S_contig8351:854..6702 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score611.3
Seed ortholog evalue3e-172
Seed eggNOG ortholog2880.D8LGN9
Preferred nameRFK
Model size2375
KEGG rclassRC00002,RC00017
KEGG koko:K00861
KEGG ReactionR00549
KEGG Pathwayko00740,ko01100,ko01110,map00740,map01100,map01110
KEGG ModuleM00125
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008531,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009124,GO:0009156,GO:0009161,GO:0009165,GO:0009231,GO:0009259,GO:0009260,GO:0009398,GO:0009893,GO:0009987,GO:0012501,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0033860,GO:0033864,GO:0034641,GO:0034654,GO:0042364,GO:0042726,GO:0042727,GO:0043085,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046444,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0050789,GO:0050790,GO:0051186,GO:0051188,GO:0051341,GO:0051353,GO:0055086,GO:0065007,GO:0065009,GO:0071704,GO:0072593,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons7
EggNOG free text desc.riboflavin kinase activity
EggNOG OGsCOG0196@1,KOG3110@2759
EC2.7.1.26
Cds size1128
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8351.19713.1prot_Ecto-sp13_S_contig8351.19713.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8351 2098..6699 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464105.3100586-UTR-Ecto-sp13_S_contig8351:853..20971681464105.3100586-UTR-Ecto-sp13_S_contig8351:853..2097Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8351 854..2097 -
1681464105.4108496-UTR-Ecto-sp13_S_contig8351:6699..67021681464105.4108496-UTR-Ecto-sp13_S_contig8351:6699..6702Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8351 6700..6702 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464105.3271177-CDS-Ecto-sp13_S_contig8351:2097..22741681464105.3271177-CDS-Ecto-sp13_S_contig8351:2097..2274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 2098..2274 -
1681464105.339175-CDS-Ecto-sp13_S_contig8351:2873..29771681464105.339175-CDS-Ecto-sp13_S_contig8351:2873..2977Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 2874..2977 -
1681464105.3548074-CDS-Ecto-sp13_S_contig8351:3148..33461681464105.3548074-CDS-Ecto-sp13_S_contig8351:3148..3346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 3149..3346 -
1681464105.3647332-CDS-Ecto-sp13_S_contig8351:3868..39681681464105.3647332-CDS-Ecto-sp13_S_contig8351:3868..3968Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 3869..3968 -
1681464105.3753383-CDS-Ecto-sp13_S_contig8351:4759..48701681464105.3753383-CDS-Ecto-sp13_S_contig8351:4759..4870Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 4760..4870 -
1681464105.3892584-CDS-Ecto-sp13_S_contig8351:5827..59531681464105.3892584-CDS-Ecto-sp13_S_contig8351:5827..5953Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 5828..5953 -
1681464105.4000857-CDS-Ecto-sp13_S_contig8351:6387..66991681464105.4000857-CDS-Ecto-sp13_S_contig8351:6387..6699Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8351 6388..6699 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8351.19713.1

>prot_Ecto-sp13_S_contig8351.19713.1 ID=prot_Ecto-sp13_S_contig8351.19713.1|Name=mRNA_Ecto-sp13_S_contig8351.19713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp
MGTVFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGATAAKTGE
AGGERAKGAGAKSAAKTADEEEEAGGVGTVVFNAVFGNLWDQGAALERAA
NILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPL
VIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTA
NLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDEGDASGGGGDGGEG
PWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQR
REKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFSGMPAATGER
STTAEAWSTRDFEAAMEEAARGADK*
back to top

mRNA from alignment at Ecto-sp13_S_contig8351:854..6702-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8351.19713.1 ID=mRNA_Ecto-sp13_S_contig8351.19713.1|Name=mRNA_Ecto-sp13_S_contig8351.19713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8351:854..6702- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATGGGCACCGTCTTTAAGGACCGGTTCCCGGAATCGGAGATCATCAC CGCCGAGTTCGTGAACTACGCGGACGAGTTCGTGTCTCTTCGGGAACGGC TGTCCGCCATCGCCGCTGCCGGCGACGGCGCCACGGCGGCTAAGACCGGC GAAGCGGGCGGAGAACGCGCCAAGGGTGCAGGCGCCAAGAGTGCAGCGAA GACGGCCGACGAGGAAGAGGAGGCTGGAGGCGTGGGGACGGTGGTCTTCA ACGCGGTGTTCGGCAACCTTTGGGACCAGGGCGCGGCGCTTGAGCGAGCC GCGAACATTCTTGAGGTGCTTTTAAGGTTGGAAAGTGTGGTGGTATGCGG TGTTTACGGCGATAGTACCGTACCGTGTCTTTTGTCGGCTGCCCCTCCTC TTGTGCCCAATGCTAGGCGGTCGGAGAAAGTTGGCGCGAGCCCGGTTTCT CCACCAACCTCCAGTCTTCTACGACCGTCGCCCTTGATATTGGTGTGTTG GGTTTCAGCAGTGAATCTCGGCTCTCCTCTCCTTTAATGTTTTGGCTGCT TTAGCGCGTGAGTTCGTGCACATCGCAACAGTTGACGCTGCTTGGACGCC ACGATCACAACGGCAGTCATCTGGAACCACTAACCTTCAGCATCAGCGCA GTCCACTCCCCGCGCGCTCCTTCCCCTTTCCCCTTTTGCGTTTTGCCTTC TTGGAAACCCCTCTGGCGCACGACGCGCCGCCAACATAATCGAGTATAGG AGGGTGGAAAGGTCGTGATTTCTCACCCGCTGGGGCGGGACTTTGTGAGC CGACTCAAGGCTGTCGACGACACGGTTGTTCCGCACGAGCTGCCGGAGCG AGACGCTCTGGAACGCTTGGTGCAGGTGGGAGAGTCCTACACACTACGCC AAAAACGCCGCACAACGAGTTCGGTATTGGTTTGTGTGATTTTTTTGTAG ACGTTCGCCGGTCGTGGAATTGATGGGGTCTCCGGTTTGAGGTTGCCGGG TAAGTAGTTGTGTTCCTATTTGATGATTTTCTTGCTGTACACGCCCGTTG GTGGCCCTTGGTGTGGCAAATATCTGCCATGTGGCGCACGCGCGGACTGG GGCAGTGACTCGGTGTCTTTGGCTGCAATGGGCACACCGGCAAGGCTGTG TCGTGGGCTGGTTATGGCCTCGCTCGTCGTACAGCAGCGATCGTGCCGCA TGTGGTCGTTACCCCTCACGTGTGTGCGCGCGCATCCCAGGGTGTTGATC CTTCTGGGGTGTACAGTGAAGTGGTCGTACAAGTTGCCATGCGTTGTATC CAGAGGTCATGAACGAGCGCCAGCTTCTCCCCACGGTAGACTTTTGGCAA GCAAATTGACGTCCTCCCTGGGAATCCTTCGGCGCTGTCCTTGCCCAAGG ACCCTGTACCCTCGCCGGATCAAGGGTTGTAGAGTCTTGAGGGTTGCGAA AATAGCACCAGCAAACGACATGATGCTCGTCGCAGCAGAGGGGGGCTGTC CCTCGATCCCTCCCCCCGCCCCCCTGGGATGTAAGAAGTGGGATGCAAAG GCGGGAAGTGATACAGATAAACTAGGGAAAGTTTTCGAGCCGCCTTTGAC AACGTACATGGTAGGAAGGAACGATTAGTCATAAGTCACCGGTCCCGTGG GAACAATACCCCTTCCTTCTTGAAGACGCGTAGTCAATGGTCCAACCGCT GAAGGCATGCAGTACATGAGCACCCACCCCCCACCACCCCCCGTCGCGCG CGTTCACGATGTTGACAATCACACACGTACGATGGCATCGGATCGGCGAA ATATATAACTCGGTGACGGGACTGCTGAACAGTTCCTGCCCTTGGTGATC GATTCGTTCGAGTCCGGGCCGGAGCTCTACCTCGCTGTGCTGAGGAAGAC GCCGCACAGGGCGTCGGGGAGGGTGCGGTACCTGAGAGGGACGGTGAGAT CCCCCGGGTTGCTCACCACACGCTACCAAACAGCCGGCCGCGACGGCGAC GGCTAAAGTTGTTGTTGTTCATGGTGACACGTAGAATCAGTAGTTCTGTT CTTGTACCACGGGTCGTAAAGTCAGTGTTGCTGTGCTTGGTGGTGACACT CGGTGGTAGAGGCACTACTGTTGTTGGCTCGCGACGTCGCACGTCGGGCT TGCTTTGCTGCCCTCCCCTTCCTGCCACGAAATGGTCGTCGTGTTTCGAG GCCTGCCGTCCCGCCACTCTCTTCTACTTTTTGTCGGAACTTCTCCGTTA TCGAATGGCATAGCTCGGGGGCGTTGGCGCCCGAGCTTGATCTTTTGCCC GCTGTTTTTTCCCAGAGACAGGGAGCGGGTTGGAAAAGAGAAGGAACATG GCAAGCGCACCCGTTAAACAGTTTATCGTGTCGGGTTAAATGCGATTGCT GCGTAGGTAGGTCTCGATGAAACCTCCCCTCGCTTCCGTGCTGCTGTACG CAAGTGTTGGGGTGTGATTTGTGTTGGGAATCATTAGGTTGTGGTTTTGG GAACTCAATTATGATTTACTACGGTTTGAAAAACTTAATAATTTCGTCCC TCCGAAACAAAATTGCGCTGGGTTTCACCCTTTGGTGGCGTTCGTCTGTG TCGGGGACCAGTCACGCACACGCTTGTGTGTCTCCCTCCCATCCTGCGCC CGAAGTTTTTTTTTTTTCGCATTTGTGTCCTGTTCCGTTCTTTGTGCGGG GGGATCGACCCCCTGACGGCCACAATAACGGCAGGTATCCACAGGGTACG GGCGTGGCAGCAAGAAGCTAGGAGTGCCGACGGCAAACCTACCCGAGTCC CAGTTCGCGGAGAACCTTCGGACTCTGCCCACTGGTGGGTGATGATGCCG AGAGGACCGACCGGTGTGGGCTGCAAGGGAGGCCGACTGGCCGCACTATT TATTCTTGATTCATGACGGATGTGCTGATTCTTGTTGCGGCACCCGTGCA AGCGAAGTTTTGTGTTTTCGCGGTCGGGAGGCACGTGATGGTGTTGAGAT GGATGCGCTGTGTTTGATCTTTAGGGCATGCCCCCTTTCTTTCGTGCAAT GTCCCCTGGTGAATTTTGCGGGCTGTCCGGCAATGGACCATCGACGACCG CAGTTGTTAATGGTGGAGACACCAAGCCTACAACATCGTGTCTTCTGTGT CCCTATTTAGATGAAGTTCTTGCGGGCTACCAGGCGATGGGTCTGTTTTT TTTTTGTAGCACCCTGGACTGTCTGGATCTTTGCCGTGGTGTTCACTCCG GTCCTGAAAGCATCGTCGTGAGGGCCATGTTCTATTGCCGGTACGACTCT TCATTCTACCATCAGTTGGGCACACCGACAAATATTCCTCGCTCGGTTTT AACAAGGTGTGTACTTCGGCTGGGCCGCTCTCGAGGGTGCCTCGAGCGAA GAGGGAGAAGGAGATGAGGGCGATGCGAGCGGCGGCGGTGGCGACGGCGG GGAGGGTCCTTGGAAGTGCGTGGCCAACGTCGGGTACTCGCCGACCTTCG CCGGCCAGGAGAACGCGGAGAAGATTGTGGAGGGCCACCTCGTCGGATAC GAAGGTGCGCGTGTTGTAGCCTCGTCGTCATCTGTAATTTTGCCTTTGTT CTGTTTCCCACGCGAAGGTGCTGCGTTCGTTGCCCGTTTCTTGCCGATAA GTGCCCGATTGAGAGGCGTTTTGGACTGTTTTTTTCAGAGTCTCTTGTTG GCGTTTTGCGTTTTTTTTTCTACAGGCGAGGATTTCTACGGCAGGACCAT GAGGATGTTGCTGGCGGGCTTCCAGCGGAGAGAAAAGAAGTTCGCGTCGT TCCCGGAACTGGTCGCCACCATCAACAAGGTGAGAGCACGCGAGCATCAT ATGGAGAAATTCAGCGATGACCAACGCATTGTGTGTCGGGGAGGGGAAGG GGACATCTACAAAAAGCAAAGTGAGGGAAAGGACAGGGCACAGGACGGAG GTATGGATCTGCAAAAACCGTTGAGGTTTCCTGCCTCTTTGCTCCATCGG CGCCTCTCGTCCAGTCGCACAGTTTTTTTTTCCTTGCAAACCCTTCGCGT TCCTGCGCTTGGGGGCATCTACCATTCTTTACAACATTGTCCTCGGTGTT TTTTCGAGGATTGTTTTTCCTGCCTCCATGTTCCCCTGAGCACGTGTATC CGCCAGCCGACATGTGCGCAATTATCGCTGCGTTTTTGTGCTGCCTTTTT TGGATGGCGTCCGCGTAGGCGATCGCGCAGTGTGCGCTTCGGGTGGCACG TGCCCACTCCATGCAACCAATTCGAAAATGCAGCTGTTGCTTTTCCCCGT TGATGAGGCCGTAGCAATGTTTCCTCACCGACAGTCATGGTGGTAAGACG CTTGCGCAAGAACGACGCGATGCTGCACTGCTGTAACGCCGGTTGCTGCC GTTCTTGCGGTTCCTTATCCGAGCTCAGGATGTCAGGGATGCAGCGGCGG CCCTGGATGAACCTCGGTTCTCCGCTTTTAAGGCGGATGCGTTCTTCTCT GGGATGCCGGCGGCGACCGGGGAGCGGAGTACGACCGCGGAGGCGTGGTC CACGCGAGACTTTGAGGCAGCGATGGAGGAAGCCGCTCGAGGGGCGGACA AGTGAAGGGGAGTGCTGCTGTCGGTGGGCAAGCTGCCGTTTCACTCCTCG CGCCCCGCTCGCTTCCAGCACGTGAAACGCTCACCGTCACATAGCGTACT TCTTGTTGGCAACAGCAAGCAGCAACACTGTAGCAGTAGCGTTGGTAGAT CTTCGGCTGTGACGCTGCCGTCCTTCTGCAATGCCGTGTGTGTTTTACCT CTGTTTTTTTTACTCGGATGTACGTCTTGGTTGCTGCAATGCTTTAAAGA GTGTTCCATCTTTTGGTTGAAAACTTAAACTTCGGATAGAGACGGGAATG TGCTCCACAATTCACAACATATCTGGTAATAGCAAGCATCTTTCGAAGAA ATTCGACGTTCGGCGAAGAATTCGGCTGAGAAACGAGCGTGTGCTTTGGA GGCCGTGGTTGTTGGTGTTGGTAGTTGGACCACAAGCCCCCTTCACTGCT TGGAGAAGTACCCTACTCCAAAATAGAAGTGAAATGGCCATGTTGTCGAG AGTTTACTGTCCACACGGTTGACACGGCACTCTGCCATCGGGTGCAGCAA AGTCCGGCGAAGAGTTTTGTCCCAATGATTTGTGTTCCAGGAATGTACCG GCCGACCGAACAATTGAAGGAGCTCTGCAGACACCTGTTCGACGAAGGCT GTATACCGACCCTCGACGATATGCGCCGCACGATAGCAGCCCCTATCAAC CCGGTCTTCGATCGACAGATACGCAACTACCGTTTACGCTTTTTCAACGA GGCAAGCACATACCGCCGGCGATGGGCTCTTTGGACCAAACCCCGAGTTT AGGGTGCTCTAGGGGGGGGATGACGAACGAGATCCTGGGGAGGATTTGGC CATCAGTCACCGGGGTGGTCAGAGCAATCTCTCCTAAACGATCACAAATC GGGTGTTGTTCAACAAGACCATAATCGCCGCAAGCGTGCGGCCGGCCTTC ATGCAACAGCTGTCGTTCGGAAAACACTTCCAATCATGTCGGCGACTTCT CGAGAACAGTAGGTGACAATCTGCGCGCGTTACTTGAACGCTTCATGTTG CCTCCAATCAGAAACCGTGCACATGGCCGCTTCTGCGGAATCCAAAATCT CTTTGGGTGACTGCAAGGTGCGCAATCGGGCGATGTCGATATGTCGGAAG CGCGTGAAATTTGAATTGGCCGGCTCCTACCCCAGCTTACGTCACCGGCG GGCGTTTTCACGTCCCCTCCTCCCTCGCGTTCAAGATCTCGCCCCGCCC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8351:854..6702-

>mRNA_Ecto-sp13_S_contig8351.19713.1 ID=mRNA_Ecto-sp13_S_contig8351.19713.1|Name=mRNA_Ecto-sp13_S_contig8351.19713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8351:854..6702- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCACCGTCTTTAAGGACCGGTTCCCGGAATCGGAGATCATCACCGC
CGAGTTCGTGAACTACGCGGACGAGTTCGTGTCTCTTCGGGAACGGCTGT
CCGCCATCGCCGCTGCCGGCGACGGCGCCACGGCGGCTAAGACCGGCGAA
GCGGGCGGAGAACGCGCCAAGGGTGCAGGCGCCAAGAGTGCAGCGAAGAC
GGCCGACGAGGAAGAGGAGGCTGGAGGCGTGGGGACGGTGGTCTTCAACG
CGGTGTTCGGCAACCTTTGGGACCAGGGCGCGGCGCTTGAGCGAGCCGCG
AACATTCTTGAGGAGGGTGGAAAGGTCGTGATTTCTCACCCGCTGGGGCG
GGACTTTGTGAGCCGACTCAAGGCTGTCGACGACACGGTTGTTCCGCACG
AGCTGCCGGAGCGAGACGCTCTGGAACGCTTGGTGCAGTTCCTGCCCTTG
GTGATCGATTCGTTCGAGTCCGGGCCGGAGCTCTACCTCGCTGTGCTGAG
GAAGACGCCGCACAGGGCGTCGGGGAGGGTGCGGTACCTGAGAGGGACGG
TATCCACAGGGTACGGGCGTGGCAGCAAGAAGCTAGGAGTGCCGACGGCA
AACCTACCCGAGTCCCAGTTCGCGGAGAACCTTCGGACTCTGCCCACTGG
TGTGTACTTCGGCTGGGCCGCTCTCGAGGGTGCCTCGAGCGAAGAGGGAG
AAGGAGATGAGGGCGATGCGAGCGGCGGCGGTGGCGACGGCGGGGAGGGT
CCTTGGAAGTGCGTGGCCAACGTCGGGTACTCGCCGACCTTCGCCGGCCA
GGAGAACGCGGAGAAGATTGTGGAGGGCCACCTCGTCGGATACGAAGGCG
AGGATTTCTACGGCAGGACCATGAGGATGTTGCTGGCGGGCTTCCAGCGG
AGAGAAAAGAAGTTCGCGTCGTTCCCGGAACTGGTCGCCACCATCAACAA
GGATGTCAGGGATGCAGCGGCGGCCCTGGATGAACCTCGGTTCTCCGCTT
TTAAGGCGGATGCGTTCTTCTCTGGGATGCCGGCGGCGACCGGGGAGCGG
AGTACGACCGCGGAGGCGTGGTCCACGCGAGACTTTGAGGCAGCGATGGA
GGAAGCCGCTCGAGGGGCGGACAAGTGA
back to top