mRNA_Ecto-sp13_S_contig8351.19713.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A6H5JR35_9PHAE (Riboflavin kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR35_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 1.190e-214 Identity = 326/376 (86.70%), Postives = 335/376 (89.10%), Query Frame = 1
Query: 1 QMGTVFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGATAAKTGEAGGERAKGAGAKSAAKTADEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFSGMPAATGERSTTAEAWSTRDFEAAMEEAARGADK 1128
+MGT FKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGA AA EEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPE+DALERLVQFLPLV+DSFESGPELYLAVLRKTPHRASG VRYLRG VSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGA+++EGEGD GPWKCVANVGYSPTFAGQENAEKIVEGHL+GYEGEDFYGRT+RMLLAGFQRREKKFASFPELVATINKDVRDAAAAL+EPRFSAFKADAFFSG PAATGERSTTAEAWSTRDFEAAMEEAARGADK
Sbjct: 142 EMGTAFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGAAAAXXXXXXXXXXXXXXXXXXXXXXXEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPEQDALERLVQFLPLVMDSFESGPELYLAVLRKTPHRASGTVRYLRGKVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGAATKEGEGDEGDASGGGRDGGEGPWKCVANVGYSPTFAGQENAEKIVEGHLIGYEGEDFYGRTIRMLLAGFQRREKKFASFPELVATINKDVRDAAAALNEPRFSAFKADAFFSGRPAATGERSTTAEAWSTRDFEAAMEEAARGADK 517
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S2XYQ3_9STRA (Riboflavin kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ3_9STRA) HSP 1 Score: 244 bits (622), Expect = 9.270e-68 Identity = 135/263 (51.33%), Postives = 171/263 (65.02%), Query Frame = 1
Query: 232 VGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGP---ELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAEN-LRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFK 1008
VG + FNAVFGNLWDQ AAL +L GG VVISHP+G FV LK D+ +VPH LP ++ LE +V LPL I SFE +LYLAVL++ P ++ LRG V+ GYGRGS+KLG+PTANLPES F + L +P GVY GWA +E + G G GP+K V N+G+SPTF G+EN EKIVE HLV EDFY + MR++L GF+R EKKF+SFPEL+A I +DV+D + ALD +F + +
Sbjct: 291 VGAIFFNAVFGNLWDQPAALAHCCELLPTGGNVVISHPMGSTFVKMLKKKDNRLVPHLLPTQEQLEAMVANLPLEIKSFEGKDGVKDLYLAVLQRVPVSPLTKLLCLRGKVAHGYGRGSRKLGIPTANLPESNFLTSALGDVPAGVYCGWALVE----QNGNG-----------AHKGPFKAVVNIGFSPTFEGKENPEKIVEAHLVHDFEEDFYDKQMRLVLVGFKRFEKKFSSFPELLANIRQDVKDCSEALDCEQFKSIQ 538
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S3Q9G1_9STRA (Riboflavin kinase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9G1_9STRA) HSP 1 Score: 230 bits (586), Expect = 5.000e-63 Identity = 129/274 (47.08%), Postives = 165/274 (60.22%), Query Frame = 1
Query: 241 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSF----------ESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGE---DFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFF 1023
VV NA FGN DQ + + AAN L+E G +ISHPLG FV +LK+ + + VP+ LP + + L+QF PL ++F ES LY A +K PH + V LRG V TG+GRG KKLGVPTANLP S F L +PTGVYFGWA ++G D K V NVGYSPTF G+EN EKIVE HL+ + + DFYG TM++ L GF R E+KFASFP+L+A IN+DV +A ++LD +S F +D+FF
Sbjct: 234 VVINACFGNFLDQDSVVTAAANSLKEDGCFIISHPLGAGFVEKLKSENPSTVPNLLPSQTEFDELLQFQPLRRENFMEEAQLSENAESATALYFASAKKIPHLLTREVLRLRGKVDTGFGRGGKKLGVPTANLPSSLFQNALENVPTGVYFGWALIKGDDQSSKGRDVIH-------------KAVVNVGYSPTFDGEENKEKIVEAHLIVGDDDIEGDFYGETMKLGLCGFLRSERKFASFPDLIAAINRDVNNAKSSLDLAPYSTFCSDSFF 494
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A836CMR2_9STRA (Riboflavin kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMR2_9STRA) HSP 1 Score: 224 bits (571), Expect = 7.550e-63 Identity = 145/347 (41.79%), Postives = 181/347 (52.16%), Query Frame = 1
Query: 1 QMGTVFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGATAAKTGEAGGERAKGAGAKSAAKTADEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLP---ESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYE---GEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFF 1023
+M VF+ R+P +++ +FV Y T K EA D+EEE V +VVFNA F NL+D A L+ A ++L EGG VVISHPLG +L A D +VPH LP AL R+ + LPL +D++ LYLA L + H G V G+GRG KKLGVPTANL + + L LPTGVY GWA +E E+G G P K V NVG+SPTF + N EKI+E HL+G + DFYG MR+LLAGF R E++FA FP+LVA I KDV DAAAALD + A AFF
Sbjct: 26 KMLDVFQQRYPGTQVFCGDFVEYVPP------------------TLPKENEA-----------------DDEEELSKVQSVVFNACFANLYDPAAHLQHACDVLSEGGTVVISHPLGSACTEKLHARDARMVPHALPAEAALRRMARHLPLRVDAWRDRDGLYLAALTRVRHALLRDFVCAYGAVGRGFGRGGKKLGVPTANLQPDGDGPLRQGLADLPTGVYIGWALVE----EDGAGAGSSSAQR-------PVKAVVNVGFSPTFE-ERNPEKIIEAHLIGRDPATSGDFYGAPMRLLLAGFLRPERRFAGFPQLVAAIRKDVADAAAALDTEPYRALAEHAFF 325
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S4JE57_GUITH (Riboflavin kinase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JE57_GUITH) HSP 1 Score: 226 bits (576), Expect = 4.210e-62 Identity = 127/296 (42.91%), Postives = 173/296 (58.45%), Query Frame = 1
Query: 229 GVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFSGMPAATGERSTTAEAWSTRDFEAAMEEAAR 1116
GV + FN+V D L+ +A++L GG+VV+SHPLG FVS +K + + ++LP D L+ LV+ LPL +D F S ELY+A L + P+ A +V +RG V++G+GRG KKLG+PTANLPES FA+ LR + TGVY GWA + G S + K V NVGYSPTF G EN EK+VE HL+ DFYG+ MR++L GF R E KF SFPEL+ I+KD+ ++ ALD FS A F + ++ EAW ++ A++ A R
Sbjct: 209 GVDVIFFNSVISTFTDLQDPLKVSASLLNPGGRVVVSHPLGSPFVSEMKKSMEELYLNDLPAVDQLQLLVKHLPLKVDKFVSEDELYIARLVQRPYHALEKVMCMRGDVASGWGRGGKKLGIPTANLPESMFADALREVQTGVYLGWAQIGGVSKKS-------------------VKAVVNVGYSPTFVGAENREKVVEAHLLEKFENDFYGKEMRLMLTGFLRPETKFDSFPELLEAIHKDIENSREALDTEEFSVLSAHPFL--------QETSDYEAWQQIAYDDAVKAAGR 477
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S1FTC5_9STRA (Riboflavin kinase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTC5_9STRA) HSP 1 Score: 219 bits (558), Expect = 6.800e-58 Identity = 132/299 (44.15%), Postives = 164/299 (54.85%), Query Frame = 1
Query: 208 DEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPE---------------------LYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALE----GASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGE---DFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAF 1020
DE +E VV NA FGN +D + L +++L EGG + I+HPLG DFV L D VPH LP+ AL L++ PL I F S + LY A R+ PHRA ++ RG V+TGYGRG K LGVPTANLP S F + L PTGVYFGWA +E G + ++G + V NVG+SPTF G+ENAEKIVE HL+ EG+ DFY TMR+ L G R EKKF SFP L A I D+ +A ALD P+F+A +AD F
Sbjct: 331 DENKEERKFDAVVINACFGNFFDLDSLLATTSSVLGEGGILAITHPLGSDFVKSLHEADPGSVPHNLPDLPALRSLLRHHPLNIVDFVSDGDVSRATLEGDAKGTGNPLDRIPLYYAAARRVPHRALKKIMRFRGPVATGYGRGGKALGVPTANLPASAFGDALLDFPTGVYFGWAVIESGRPGKTPKKGRATHH--------------RAVVNVGFSPTFEGKENAEKIVEAHLIVDEGDILGDFYNETMRLSLVGQLRGEKKFPSFPALKAAIENDIINADDALDAPQFAALRADPF 615
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S2WP52_9STRA (Riboflavin kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP52_9STRA) HSP 1 Score: 213 bits (541), Expect = 4.260e-57 Identity = 134/296 (45.27%), Postives = 161/296 (54.39%), Query Frame = 1
Query: 241 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLP---LVIDSFESGPE----------LYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEG--EDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFK-ADAFFSGMPAATGERSTTAEAWST 1080
VV N+ F N + Q AL AA L+ GG+ +ISHPLG VS L+ D VVPHELP R L+RLVQ+ P L ++ PE YLA LR+ H+ + LRG V++G+GRGS+KLG PTANLP S F L L TGVY GWA +EG S G G V N+GYSPTFAG+EN EKIVE HL+G G DFYG TMR+ L GFQR E KF F LVA I++DV DA AL E F K A+ + G +W T
Sbjct: 203 VVMNSCFANFFSQEEALASAATFLKNGGECIISHPLGEPCVSALRERDAAVVPHELPTRRGLDRLVQYQPFQVLQVEDVRGDPEDPFNADSSSGFYLARLRRVAHQTLHQRLCLRGQVASGFGRGSRKLGFPTANLPSSLFDTALEGLQTGVYCGWALVEG-SGRPGFGVAHP--------------AVVNIGYSPTFAGEENPEKIVEAHLIGDCGFDSDFYGETMRLCLVGFQRSEMKFPDFGTLVAQISQDVEDAKVALQEELFIQVKDAEEWLDGAATIKDSEGLQGASWKT 483
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A8J6C5Q3_DIALT (Riboflavin kinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Q3_DIALT) HSP 1 Score: 209 bits (531), Expect = 2.290e-55 Identity = 140/300 (46.67%), Postives = 164/300 (54.67%), Query Frame = 1
Query: 205 ADEEEEAGGVGT---VVFNAVFGNLWDQGAALERAANILE-EGGKVVISHPLGRDFVSRLKAVDDTVVPHELP-ERDALERLVQFLPLVIDSFES----------GPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLV--GYEGED-----------FYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAF 1020
AD E AG G VVFNA FGN+ AL A GG+VVI+HPLGR FVSRL+A D VVPHELP + AL L + LPL + + + G Y A+L + R RV LRG VS GYGRGS +LGVPTANL E FA L +PTGVY GWA +EGA+ GE + V NVGYSPTFAG ENA+KIVE HL+ G G + FYG MR+LL F R E KF SFP L+A I+KDV +AA L E + F D F
Sbjct: 189 ADAEAAAGRGGAFDAVVFNACFGNMHSPRLALRAACTAARPSGGRVVIAHPLGRAFVSRLRAEDAAVVPHELPADARALAELAEGLPLRLVALDDEAPADGAGGGGDGFYCALLERWLPRPLPRVMLLRGEVSRGYGRGSAQLGVPTANLREQDFAGELAHVPTGVYAGWAVIEGAAGRAGEVVH---------------RAVVNVGYSPTFAGAENAQKIVEAHLLPGGPSGRENGGGALFAPASFYGAQMRLLLCAFVRPEHKFESFPLLLAAIHKDVDEAARVLSEDELAPFARDPF 473
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A1Z5KTL7_FISSO (Riboflavin kinase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTL7_FISSO) HSP 1 Score: 203 bits (517), Expect = 6.710e-54 Identity = 127/305 (41.64%), Postives = 165/305 (54.10%), Query Frame = 1
Query: 241 VVFNAVFGNLWDQGAALERAANILEE------GGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQFLPLVIDSFESGPEL-------YLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEG-EDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAFFS-GMPAATGERSTTAEA-WSTRDFEAAMEE 1107
+V NA FGN W+ LERAA +L+ GG + I+HPLG +FV++L VPH LP+++ L + +FLPL + + L Y L + H ++ RG V++GYGRG KKLG PTANL + F + L T+PTGVYFGWA +EG ++ K V NVG+SPTF G ENAEKIVE HL+ E +DFYG TMR+ L GF R E KF SFP LVA I D ++A ALD +S K+D F P G +A W +D A+EE
Sbjct: 185 IVMNACFGNFWNSLDVLERAAQLLKPPTPQTPGGLLFITHPLGAEFVAQLHQETPETVPHCLPDQEQLIHMTRFLPLQLIDLQKSVSLTGEAQPFYCGTLERVRHCCLPQLMRFRGPVASGYGRGGKKLGFPTANLEPALFRKALETVPTGVYFGWAVIEGRNACH--------------------KAVVNVGFSPTFEGAENAEKIVEAHLLLEESIDDFYGETMRLQLHGFLRPEIKFDSFPALVAQITADAKEAKEALDLRPYSTLKSDTFLEINNPTWIGNIGGDDQASWEFQDSNEAIEE 469
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Match: A0A7S3L497_9STRA (Riboflavin kinase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L497_9STRA) HSP 1 Score: 201 bits (512), Expect = 6.710e-53 Identity = 125/269 (46.47%), Postives = 153/269 (56.88%), Query Frame = 1
Query: 241 VVFNAVFGNLWDQGAALERAANIL--EEGGKVVISHPLGRDFVSRLKAVDDTVVPHELP-ERDALERLVQFLPLVID----SFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGASSEEGEGDXXXXXXXXXXXXXGPWKCVANVGYSPTFAGQENAEKIVEGHLVGYEGE--DFYGRTMRMLLAGFQRREKKFASFPELVATINKDVRDAAAALDEPRFSAFKADAF 1020
V+ NA FGN W+ A LE L ++GG V++SHPLG +FV +L D T VPH LP D + ++LPL + SFES P Y A L++ H A V LRG V+TG+GRG KKLG PTANL + L ++ TGVYFGWA +EG S G K V NVG+SPTF G+ENAEKIVE HL+ E E DFY TMR+ L GF R E KF SFP L+A I++D +A ALD AF D F
Sbjct: 223 VILNACFGNFWNTSAVLEHICLRLLKQKGGSVIVSHPLGSNFVEKLNREDPTTVPHLLPASSDEWSVMTRYLPLELKKMDFSFESNP-YYFAWLQRVRHVALPNVMRLRGKVATGFGRGGKKLGFPTANLSPVEMRPALESVETGVYFGWAVIEGRS--------------------GIHKAVVNVGFSPTFEGKENAEKIVEAHLLFGEEEVKDFYSETMRLQLHGFLRPEIKFPSFPALIAQISEDRDEARGALDVEPSVAFSKDPF 470 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8351.19713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8351.19713.1 >prot_Ecto-sp13_S_contig8351.19713.1 ID=prot_Ecto-sp13_S_contig8351.19713.1|Name=mRNA_Ecto-sp13_S_contig8351.19713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp MGTVFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGATAAKTGEback to top mRNA from alignment at Ecto-sp13_S_contig8351:854..6702- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8351.19713.1 ID=mRNA_Ecto-sp13_S_contig8351.19713.1|Name=mRNA_Ecto-sp13_S_contig8351.19713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8351:854..6702- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8351:854..6702- >mRNA_Ecto-sp13_S_contig8351.19713.1 ID=mRNA_Ecto-sp13_S_contig8351.19713.1|Name=mRNA_Ecto-sp13_S_contig8351.19713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8351:854..6702- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |