prot_Ecto-sp13_S_contig8350.19712.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8350.19712.1
Unique Nameprot_Ecto-sp13_S_contig8350.19712.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8350.19712.1 vs. uniprot
Match: D7FXW2_ECTSI (Phosphotransferase system component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW2_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 2.430e-66
Identity = 121/131 (92.37%), Postives = 123/131 (93.89%), Query Frame = 0 
Query:    6 SGKRDVISPSAPMSTSPPSPSAGSAPPSSVAAFTERTLPRCYDTDDAASFAKRVALVGSSGGGAAAQGQFDGPSLLRLAKKELGRAGIHLAAVQFVACAEPLDLAKPSSAATLWVAGTIEGDEALVVAAEG 136
            SGKRD+ISPS PMSTS PSP AGSAPPSSVAAFTERT  RCYDTDDAASFAKRVALVGSSGGGAAAQGQFDGP+LLRLAKKEL RAGIHLAAVQFVACAEPLDLA PSSAATLWVAGT EGDEALVVAAEG
Sbjct:  176 SGKRDMISPSVPMSTSSPSPPAGSAPPSSVAAFTERTSSRCYDTDDAASFAKRVALVGSSGGGAAAQGQFDGPALLRLAKKELERAGIHLAAVQFVACAEPLDLANPSSAATLWVAGTGEGDEALVVAAEG 306
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BLAST of mRNA_Ecto-sp13_S_contig8350.19712.1 vs. uniprot
Match: A0A813JUU5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JUU5_POLGL)

HSP 1 Score: 50.8 bits (120), Expect = 8.060e-5
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 0 
Query:   57 KRVALVGSSGGGAAAQGQFDGPSLLRLAKKE----LGRAGIHLAAVQFVACAEPLDLAKPSSAATLW 119
            +RVAL+GS+GGGAA  G  D P  LRLA +     +G  G  +A   FVAC  PLD A+P + ++LW
Sbjct:    8 RRVALIGSTGGGAATLGHGD-PDSLRLALERQLELVGGGGACVAEAVFVACDAPLDSARPDTPSSLW 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8350.19712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXW2_ECTSI2.430e-6692.37Phosphotransferase system component n=1 Tax=Ectoca... [more]
A0A813JUU5_POLGL8.060e-547.76Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8350contigEcto-sp13_S_contig8350:6041..6763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8350.19712.1mRNA_Ecto-sp13_S_contig8350.19712.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8350 6041..6763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8350.19712.1 ID=prot_Ecto-sp13_S_contig8350.19712.1|Name=mRNA_Ecto-sp13_S_contig8350.19712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MTCCDSGKRDVISPSAPMSTSPPSPSAGSAPPSSVAAFTERTLPRCYDTD
DAASFAKRVALVGSSGGGAAAQGQFDGPSLLRLAKKELGRAGIHLAAVQF
VACAEPLDLAKPSSAATLWVAGTIEGDEALVVAAEGQ*
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