mRNA_Ecto-sp13_S_contig8350.19711.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A6H5L9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M4_9PHAE) HSP 1 Score: 711 bits (1834), Expect = 2.540e-255 Identity = 383/459 (83.44%), Postives = 394/459 (85.84%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWMIRLQGAIPVVAAAVAARQASTLGDMATAAGA-------QNKTSVLVILSRSTAPDEQHFKSLH-VSITTYRQRLYAIHARPSRETCVSR------RLLGAIATSTDAFIVGLQATWMQAVVGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAFALGLLRPKAK 1337
TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNS AFTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSK VSY AGLAGHWRLRY+SAKELMQPLAPAATFAGCLPVQIGVTVAVALGSV TTGDLLDG+VLA PWMIRL+GAIPVVAAAVAARQASTLGDMATAAG +N + L + LYA A + +LLGAIATSTDAF+V LQ TW+QA+VGA MGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLC AHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGA VAVGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAFALGLLRPKAK
Sbjct: 12 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSHAFTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSKVVSYAAGLAGHWRLRYDSAKELMQPLAPAATFAGCLPVQIGVTVAVALGSVPTTGDLLDGAVLAAPWMIRLEGAIPVVAAAVAARQASTLGDMATAAGVIAGSLCMENTLAALXXXXXXXXXXXXXXXXXXDFGVPATALSLYATAASGILSGAMVLSVLPFLKLLGAIATSTDAFLVRLQTTWIQALVGAAMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCVAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGAFVAVGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAFALGLLRPKAK 470
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: D7FXW2_ECTSI (Phosphotransferase system component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW2_ECTSI) HSP 1 Score: 279 bits (714), Expect = 7.680e-86 Identity = 144/151 (95.36%), Postives = 146/151 (96.69%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAGCLPVQIG 455
TLLDVNMAARKEDVKIAAALREGCGR DDAP QSPRGAN ATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLG+ALAMGCLLVGSSGGSVATTNKSK VSY AGLAGHWRLRY+SAKELMQPLAPAATFAGCLPVQIG
Sbjct: 307 TLLDVNMAARKEDVKIAAALREGCGRHDDAPTQSPRGANTATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGAALAMGCLLVGSSGGSVATTNKSKVVSYAAGLAGHWRLRYDSAKELMQPLAPAATFAGCLPVQIG 457
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A8J6C6H0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C6H0_DIALT) HSP 1 Score: 173 bits (438), Expect = 1.060e-44 Identity = 173/485 (35.67%), Postives = 228/485 (47.01%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVH--GVNSEAFTAARGCRAPVVGTGGTSLGSALA-MGCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWM----IRLQGAIPVVAAAVAARQASTLGDMATAAGAQ----NKTSVLVILSRSTAPDEQHFKSLHVSITTYRQRLYAIHAR---PSRETCV---------------------------SRRLLG-AIATSTDAFIVGLQATWMQAVVGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPTSPV---DLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVA-VGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAFALGL 1319
+L VN A + D ++A L G LHGLV++S D GVN+ A AA PV GTGG+SL A A GC+LVG+SGGSVATT +SKA+ A LA WR + A A A GCLPV + V A L LL + + +R + A+P A+AA+ S LG+++ GA ++ S L L + A + R A AR P+ T + +R LL A+ + A +V A AVVGAG+ +GS+ G+YH + LP+I LE RGE ++ GA+DL ALC+V AG CAA L P + D LARRGL NL GD++EA +PF+ R R +A A SA +GAL A GGV STAY+PLPVAV P L+ A AF FA+G+
Sbjct: 82 SLAQVNARAHELDARLAERLAAGA------------------------LHGLVSVSADARPGGVNARALKAAGRAALPVAGTGGSSLSMAAAEYGCVLVGNSGGSVATTPESKAIGVAAALAAAWREHFAPASASGGG-AWHAPIDGCLPVFLAVACAATLAD--RAAPLLPPPLASXXXXFAGALRAR-ALPPAVGAIAAQHRSGLGELSVLGGALVGALSRDSPLCALLAAAA------------LAAAAPRCMAACARASVPATATSILVAXXXXXXXXXXXXXXXXXXXALTSHARALLALALGGARGAPLVARGAC--GAVVGAGVH----WGSRRGFYHALVLPLIALEAERGEM-ALLGALDLLALCVVGAGACAAQLALPRAASGARDAPLARRGLALNLGCGDYVEACFPFLARDRALDAAALCASAAAGALCASAGGVRSTAYVPLPVAVVLSDAPRALVRAALVAFCAPFAVGV 519
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A812RRM4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812RRM4_9DINO) HSP 1 Score: 168 bits (426), Expect = 3.740e-43 Identity = 149/428 (34.81%), Postives = 211/428 (49.30%), Query Frame = 3
Query: 117 NAATSPKMLPLHGLVAISCDVH--GVNSEAFTAARGCRAPVVGTGGTSLGSALA-MGCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWMIRLQGAIPVVAAAVAARQASTLGDMATAAGAQNKTSVLVILSRSTAPDEQHFKSLHVSITTYRQRLYAIHARPSRETCVSRRLLGAIAT--STDAFIVGLQATWMQAVV----------------GAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPT-----SPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVGGVA-STAYLPLPVAVAACSKPWWLLGATSAAFLPAFALGL 1319
+A + +M + G++AIS DV GVN AA + PV GTGGTSL A + +GC L G++GGSVATT ++KA+ AGLA W + + + A + GCLP + + S L S A + +P V A AA+Q S LG++A GA +L L R + + S+ L A + P+ T +S + G ++T T AF++ QA V+ GA G LM +GS+ GWYH+ FLP+I++E+ S GA+D LCM AG CAA L P D LA+RG+ NL FGD+IEA +PF+ R +A Y+ S ++GA++A GG A STAYL P+A+A ++ L A + AF A GL
Sbjct: 100 DAELASRMEAVDGVIAISTDVGPGGVNRRTMAAAGQAKIPVAGTGGTSLSLAASDLGCCLAGNAGGSVATTPETKALGIAAGLASAWGATF-APPTSRRSFAWHSALDGCLPAFL---------AASCLNQALPSSAPAELRLALQVQVLPPVLGAAAAQQGSGLGELALLGGA-----LLGSLCRGSCAAALLGGRIFASLAPRCLVLCARLSIPATATALS--VAGGLSTMLGTLAFVMAPQAAEATEVLRRSLRTSLSYGPPGLAGAFAGVLMNFGSRRGWYHQFFLPLILVEMEHASM-SFLGALDWLTLCMTGAGACAAQWLLPRRQEEKKEADTRLAKRGVALNLFFGDYIEACFPFLARDFALDASVYIASGLAGAIIATGGGAQSTAYLAAPLAIAVGTERPALAKAAAVAFGLPLAAGL 509
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A7S1USB9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USB9_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.090e-40 Identity = 150/438 (34.25%), Postives = 206/438 (47.03%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAM-GCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWMIRLQGAIPVVAAAVAARQASTLGDMAT-AAGAQNKTSVLVILSR----STAPDEQHFKSLHVSITTYRQRLYA---IHARPSRETCVSRRLLGAIATSTDAFIVGLQATWMQAV---VGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHL-LRPTSP---------VDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVG--GVASTAYLPLPVAV 1244
TL +VN R+ DVKIA A+R S R + L+ ISCDV +++E AA PV G+GGTSL SA + LVG++GGSVATT+ ++AVSY LA W+ Y + + CLP V + + + + D + S++ L VV A A Q ++ MA+ A + S++ L S F + + I L + A T LG + A I L T M VG MGC CYGSK+G+YH ++LP+I++E+ G S+WG ID C L +V+AG+CA +L + P +P D+ L RRGL NL +GDFIEAAYPFMER N YL S +S L+ V S AYLPLPV++
Sbjct: 113 TLKEVNNVCREADVKIAKAIR------------SKR------------VSALICISCDVQ-IHAETLHAAADMGIPVTGSGGTSLSSAASQFNVHLVGNAGGSVATTSYTRAVSYTDALATAWKKPYKPFSASLVRPQWRSVLKACLPAFWAVALTIRMQQMFGLDD--EDSMVQVLRRFALPTTCCVVTATSCAPQYESIVIMASIVASMACRESIIAGLVAGWLVSLIVGRTLFACVRLGIPATMTNLLVAGGVGAVVFLLTYPVAPFLGDV----SAIIRWLVRTSMSGQIPGVGFAMGCFSCYGSKVGYYHALWLPIILIEMEFGSA-SLWGTIDECTLVLVSAGICAGNLAVNPRTPSDDHGQGVETDVALCRRGLRINLLYGDFIEAAYPFMERSVVVNVAGYLASGISTELLTGNPTDVLSMAYLPLPVSI 518
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A0G4EEZ3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EEZ3_VITBC) HSP 1 Score: 152 bits (385), Expect = 3.660e-37 Identity = 153/484 (31.61%), Postives = 210/484 (43.39%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALRE-GCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSEAFTAAR--GCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSKAVSYVAGLAGHW------RLRYNSAKELMQPLAPAA----------------TFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWM-IRLQGAIPVVAAAVAARQASTLGDMATAAGAQNKTSVLVILSRSTAPDEQHFKSLHVSITTYRQRLYAIHARPSRETCVS----------RRLLGAIATSTDAFIVGLQATW------MQAVVGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAFALGLLRP 1328
TL +VN AR D +I +R G G D N +S L L GL+A+S D GVN EA AA R P+VGTGGTS A G + A L W R + A EL P P + GCLPV + V V ++S D G A+ WM + +P V A VAA+Q S LG+ + GA + ++ + Y + A + T L I + + + + +W ++ + GA +G + +GS G YH V LP+I++E+ RG+ ++ GAID C L V+ GLC AH++ P D+ L+RRGL N FGDFIE AYPFMER CN A L +A+SG +V + G S+AYLPLP+AV +P A L AFA+ +L P
Sbjct: 98 TLQEVNGVARHVDRQIGTLIRGVGNGNGDSD--------NITSS---LRLSGLIALSFDADGVNREALIAASLPTVRLPIVGTGGTSSAVPSAWGR-------------------GWWAALGDRWPPHLLRRPSPSVAGELRVPYWPTSGQTVLGIRHLLHTMHSVLGGCLPVFV--CVMVVKWALSRVYDS-SGQSTASMWMQVLCSRGLPTVVATVAAQQTSELGETSVLVGALAGSCIVGQGGVIAGLXXXXLGGMAAPTVLACACRYGVPATAASITTAGGTGIVTGGLVELALSPICSQLASSVRFILHSWPLSSMLLRCIKGAALGWFVWWGSGRGMYHIVILPLIIVEMERGDPATL-GAIDECVLVGVSLGLCLAHIVFPRQKEDVHLSRRGLFINFLFGDFIEGAYPFMERSTICNTAAGLAAALSGVVVCMFGARSSAYLPLPLAVLISDRPL--------AMLAAFAISVLVP 539
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: B7GAH2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAH2_PHATC) HSP 1 Score: 148 bits (373), Expect = 1.560e-35 Identity = 134/407 (32.92%), Postives = 192/407 (47.17%), Query Frame = 3
Query: 147 LHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAMGCL-LVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAG-CLPVQIGVTVAVA---------LGSVSTTGDLLDGSVLATPWMIRLQGAIPVVAAAVAARQA--STLGDMATAAGAQNKTSVL--VILSR--STAPDEQHFKSLHVSITTYRQRLY---AIHARPSRETCVSRRLLGAIATS---TDAFIVGLQATWMQAVVGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPT--------SPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGA-LVAVGGVA--STAYLPLPVAVAACSKPW 1265
+ GL+ ISC V G+ S AA V G+GGTSL + + L+G++GGSVATT ++AVSY + A +W+L Y K Q + + CLP+ GV + + S G ++ S+L M +A + A+ A S+L A A S+L ++ R S A + + + +I L + A + +LG I S T A VG ++ G +GC CYGSK+GWYH V LP+I++E+ G+ S+ GA+D L +V+AG+CAA++L T S D+ L RRG N+ GDF+EA YP ME N YL S +S A LVA S AYLPLP+A+ W
Sbjct: 120 IDGLICISCHV-GIFSSVLLAAASKEIRVTGSGGTSLSQVANLYHIRLIGNAGGSVATTTFTRAVSYTSAFAAYWKLAYEPWKRCRQSGSSCTSVLNSCLPMFWGVCLLKQCLLFLHERFFENSSQCGSFIEASILVLEQMALPFSCCVTMATSHASGPAPVSSLNMAALIASTSCSRSILSGLLAGRLVSFATERLLYTLIFWNIPATMANLLISGGVGALIALLMLPVSPVLGIITASIRWTLAVSVGFPNLQVRIGAGCALGCFCCYGSKVGWYHSVILPLILIEMELGDA-SVLGAVDELTLVLVSAGICAANVLYSTLHSRQDHLSTADIDLCRRGFFLNIACGDFVEACYPLMENRLAVNVSGYLASGLSTAWLVASSSQTPKSLAYLPLPIAIGVSETNW 524
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A853AKJ2_9PSEU (Fructose-specific phosphotransferase system IIC component n=1 Tax=Saccharopolyspora hordei TaxID=1838 RepID=A0A853AKJ2_9PSEU) HSP 1 Score: 147 bits (371), Expect = 2.060e-35 Identity = 144/436 (33.03%), Postives = 195/436 (44.72%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYN----------SAKELMQPLAPAATFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWMIRLQGAIPVVAAAVAARQASTLGDMATAAGAQNKTSVLVILSRSTAPDEQHFKSLHVSIT--TYRQRLYAIHARPSRETCVSRRLLG---------AIATSTDAFIVGLQA------TWMQAVVGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVGGVASTAYLP 1229
TL +VN AAR D ++A +R G + GLV +S D NS A AA AP GTGGTSL +A A+G LV +SG + TT+ ++AVSYVAGLA HW L+Y + + ++ T G +P I + + +AL V LDG P L +PVV AAVAAR+ S L ++ AGA T +R A A VS L G A+A T A G++ W + GA G +M G YH V LP++++E+ +G S +GAID+ L MV+ G+ A+ + P S + LA G N+ FG F+EAAYPF+ + AGA L +A GALV G +TAYLP
Sbjct: 86 TLAEVNEAARAHDERVAELVRSG------------------------EVDGLVLVSADPDDTNSRAVAAAAERGAPAAGTGGTSLAAAQALGVDLVAASG-TTGTTSATRAVSYVAGLARHWGLKYRPVIGSATTQAAGGSPWRRISVRGTMVGSIPAFIALALVLALSRVPG----LDGL---EPVFETLLDGLPVVVAAVAARRVSGLDEVGLVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTLARRFPATTAN-----IVSGGLAGLLGGLVVHLALAPLTSAIGEGVKTGVEALVAWNPLLAGAVAGLVMWPAIIGGVYHAVILPLVLVEMGE-KGHSFFGAIDMVGLVMVSLGIALANAVLPRSSGERALAASGAAVNVGFGTFVEAAYPFLFADKRVFAGALLSAAAGGALVGWTGSEATAYLP 483
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A1E7EUU6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUU6_9STRA) HSP 1 Score: 144 bits (362), Expect = 4.750e-34 Identity = 125/425 (29.41%), Postives = 210/425 (49.41%), Query Frame = 3
Query: 147 LHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAMGCL-LVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYNSAKELMQPLAPAATFAG----CLPVQIGVTVAVALGSVSTTGDLL-DGSVLATPWMIRLQGAIPVVAAAVAA---RQASTLGDMATAAGAQNKTSVLVILSRSTAPDEQHFKSLHVSITTYRQRLYAIHARPSRETCVSRRLLGAI-----------------------------ATSTDAFIVGLQATWMQAVVGAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAF 1307
+HGL+ +SCD + S F AA P+ GTGGTSL A + L L+G++GGSV TT ++KA+S+ + + W L+Y + A A ++ CLP + + + + G+ + + A +MI +P++ A + A R+ ++ A A + + ++L L + L++ I ++ P+ T + R +G + +T + + + G +++ + + +GCL CYGSKIGWYH +FLP+I++E+ G+ S+ GA+D L +V+AG+C +L ++ + +LARRG+ NL GDFIE YP ME+ N Y+ S+VS A++ GG S+AY+P PVA+ + L A++ AFL F
Sbjct: 125 VHGLITVSCDPSTL-SRTFQAAAKHNVPITGTGGTSLSMATSKFKLRLIGNAGGSVGTTPETKAISFASAFSEEWDLKYCPWEATTTKAANAPSWKSVLNSCLPGFWSIVLLKRIILTTPVGECIPEHERKALIFMIESYS-LPILCAVIMATSRRKVESVQMSAVLAASACRKTILGGLISGWCVSILEVRLLYICILKWKL--------PATMTNLLRVFVGILTAVIMIPISPYLSQITEQYRHITLTYLWESTGSSSVVHG----YIRLLASSFLGCLFCYGSKIGWYHSIFLPIILVEMEIGDA-SMLGALDFLTLVLVSAGICLGIILTGSTE-ERSLARRGIATNLLCGDFIEVCYPHMEQHYLVNISGYVASSVSVAVL-TGGCRSSAYMPFPVAIWLANDQKQFLIASTIAFLIPF 532
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Match: A0A1M4ZG67_9BACL (Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific n=1 Tax=Seinonella peptonophila TaxID=112248 RepID=A0A1M4ZG67_9BACL) HSP 1 Score: 140 bits (353), Expect = 6.660e-33 Identity = 132/465 (28.39%), Postives = 202/465 (43.44%), Query Frame = 3
Query: 3 TLLDVNMAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISCDVHGVNSEAFTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSKAVSYVAGLAGHWRLRYN------SAKELMQPLAP------AATFAGCLPVQIGVTVAVALGSVSTTGDLLDGSVLATPWMIRLQGAIPVVAAAVAARQASTLGDMATAAGAQNKTSVLVILSRSTAPDEQHFKSLHVSITTYRQRLYAIHARPSRET-CVSRRLLGAIATSTDAFIVGLQATWMQAVV---------------GAGMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAAGLCAAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAAYPFMERCRCCNAGAYLGSAVSGALVAVGGVASTAYLPLPVAVAACSKPWWLLGATSAAFLPAFAL 1313
TL +VN AR D KIA + G + GL+ +S D GVN + AA G + P+VGTGGTS+ A G ++ +SG + TTN+++A+S+++ L+ HW+L+Y + E+ Q P LP I + + +AL + G P L A+P++ AA+AARQ S L ++AT AG + TY +L P+ ++ G +A F++ A + ++ GA G L+ G YH LP+++LE+ + G S GA+D+ L MV+AG+ A+++ P D+ A G + N+ FG F+EAAYPFM R AGA + +G LV + V TAY+P A + PW + A L AF +
Sbjct: 87 TLKEVNQQARTMDQKIAELIDAG------------------------EIDGLIMMSADPRGVNQKTVQAAAGKQIPIVGTGGTSMSLVTAAGANVIATSG-TTGTTNRTRAISFISSLSKHWQLKYRPVIGTTAKNEMNQSQLPWQRIRLQGMMMAALPGFIALALILALSKI-------PGLQALAPIFDLLIKALPIMLAAIAARQISGLDEIATVAGIL----AXXXXXXXXXXXXXXXXXXXXXLLTYLFQLTVRWNFPATTVNIIAGSFAGLLAGLLGKFLIAPAALEIGKLIRSTIEILIHFSPVAAGAVAGLLIWPAILGGVYHAAILPIVLLEMEK-TGHSFLGAVDMTGLVMVSAGITLANIIVPKKKSDVAAASPGFLINMGFGTFVEAAYPFMFSNRIVFAGAIFSAGFAGMLVGLFDVRGTAYVPSFTAPFLSNHPWGFVIAMLGGLLSAFII 514 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8350.19711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8350.19711.1 >prot_Ecto-sp13_S_contig8350.19711.1 ID=prot_Ecto-sp13_S_contig8350.19711.1|Name=mRNA_Ecto-sp13_S_contig8350.19711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=440bp MAARKEDVKIAAALREGCGRQDDAPKQSPRGANAATSPKMLPLHGLVAISback to top mRNA from alignment at Ecto-sp13_S_contig8350:382..5503- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8350.19711.1 ID=mRNA_Ecto-sp13_S_contig8350.19711.1|Name=mRNA_Ecto-sp13_S_contig8350.19711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8350:382..5503- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8350:382..5503- >mRNA_Ecto-sp13_S_contig8350.19711.1 ID=mRNA_Ecto-sp13_S_contig8350.19711.1|Name=mRNA_Ecto-sp13_S_contig8350.19711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1320bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8350:382..5503- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |