prot_Ecto-sp13_S_contig835.19710.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig835.19710.1
Unique Nameprot_Ecto-sp13_S_contig835.19710.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length431
Homology
BLAST of mRNA_Ecto-sp13_S_contig835.19710.1 vs. uniprot
Match: D7FGS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS0_ECTSI)

HSP 1 Score: 599 bits (1545), Expect = 3.310e-213
Identity = 330/374 (88.24%), Postives = 338/374 (90.37%), Query Frame = 0
Query:    1 MPHSLSSYGLSDGRVSTTMATXXXXXXXXGLGQARSFTIPLVMPGNSGMPRAKPASRAVVGRQPSTDEASWDAEEIATADVATAISRDLVTKAERWKLLAEEPLMAQSITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNVCTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPTWLGSLWIECAFCVFYTCHLRQEALSRLGSVPVRNDDGGGGVGXGWSGVEGEEDEE----EVERDRPQAEVYSLSALRPWQLARTCMVTVLSVSIVAKLFSHYIFGVTWFRQVFWRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFLIXXXXXXYGFIGYIVYRDEP 370
            MPHS SSYGLSDGRVSTTM  XXXXXXXX LG+ARSFTIPLVMPGNSGMPRAK AS  VVGR+PSTDEASWDAEEIATADVATAISRDLVTKAERWKLLAEEPLMAQSITPLLADNVDKHEVAA YVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLN+CTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPT LGSLWIEC  CVFYTCHLRQEALSRLGS+PV+N  GGG   X                E+ERDRPQAEVYSLSALRPWQLARTCMVTVLSVS+VAKLFSHY+FGVTWF    WRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFLIXXXXXXYGFIGYIVYRDEP
Sbjct:    1 MPHSSSSYGLSDGRVSTTMTXXXXXXXXXXLGKARSFTIPLVMPGNSGMPRAKSASGGVVGRRPSTDEASWDAEEIATADVATAISRDLVTKAERWKLLAEEPLMAQSITPLLADNVDKHEVAATYVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNICTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPTSLGSLWIECVLCVFYTCHLRQEALSRLGSIPVKN--GGGXXXXXXXXXXXXXXXXXXXXELERDRPQAEVYSLSALRPWQLARTCMVTVLSVSLVAKLFSHYVFGVTWFS---WRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFLIXXXXXXYGFIGYIVYRDEP 369          
BLAST of mRNA_Ecto-sp13_S_contig835.19710.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 8.750e-111
Identity = 203/385 (52.73%), Postives = 252/385 (65.45%), Query Frame = 0
Query:   43 MPGNSGMPRAKPASRAVVGRQPSTD-EASWDAEEIATADVATAISRDLVTKAERWKLLAEEPLMAQ-------------SITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNVCTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPTWLGSLWIECAFCVFYTCHLRQEALSRLGSVPVRNDDGGGGVGXGWSGVEGEEDEEEVERDRPQAEVY--SLSALRPWQLARTCMVTVLSVSIVAKLFSHYIFGVTWFRQVFWRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFLIXXXXXXYGFIGYIVYRDEPHVSSLLSDLDLFDQPASSALTFLRIFTARSFMLDVEEIYGG 411
            +PG  G    K  +R V  ++     +A W A E     VATAISRDLV KAERWKLL  EPL                 + PLLA +VDKHEVA+IYV+DALAGR+S  C+HN+ S+RALK  RN AWN LLN+CT+VHL+LP+VEIQRCL CMG  +   SL+ N+L  GWRPT LGS+W+EC  C+ Y   L + AL+    V  R+  GGG      S  +G+ D    + +  +A  +  SL+ L PWQLARTCMV +L+  ++  +F+HY F +TW R   W  V LPFLFISRRTYLKHF+   IR+LPRM+PVVFL+      Y FIGYI+YRDEP  SSLL DLDLF QP+SSA+TFLR+FT+  FMLDVE IY G
Sbjct:   50 LPGRRGGHLRKKPTRGVTRQEGHLSLDAIWSASE-----VATAISRDLVEKAERWKLLGGEPLTGSPARFAHEDRSQLPEVQPLLAHDVDKHEVASIYVKDALAGRESPTCMHNQNSLRALKLVRNKAWNQLLNICTIVHLMLPIVEIQRCLPCMGMQKIPESLDSNSLHTGWRPTLLGSMWLECLLCLLYVYDLYKVALAS-NHVHKRSHRGGG------SDRDGDRDIGVSKGEGAKASSWHSSLARLPPWQLARTCMVALLAFGLLTNIFAHYAFKITWHR---WSRVTLPFLFISRRTYLKHFVGGVIRVLPRMLPVVFLMSFVVFFYAFIGYILYRDEPRTSSLLQDLDLFSQPSSSAMTFLRMFTSIPFMLDVEHIYAG 419          
BLAST of mRNA_Ecto-sp13_S_contig835.19710.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.650e-73
Identity = 141/311 (45.34%), Postives = 172/311 (55.31%), Query Frame = 0
Query:  101 EEPLMAQSITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNVCTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPTWLGSLWIECAFCVFYTCHLRQEALSRLGSVPVRNDDGGGGVGXGWSGVEGEEDEEEVERDRPQAEVYSLSALRPWQLARTCMVTVLSVSIVAKLFSHYIFGVTWFRQVFWRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFLIXXXXXXYGFIGYIVYRDEPHVSSLLSDLDLFDQPASSALTFLRIFTARSFMLDVEEIYGG 411
            E+      + PL+A +VDKHEVA+IYV+DALAGR+S  CIH++ S+RALK  RN AWN LLN+CT+ HL+LP+VEIQRCL CMG  +   SL+ N+L  GWRPT LGS+W+EC  C+ Y   L + AL+R                                                                                   W  V LPFLFISRRTYLKHF+   IR+LPRM+PV FL+      Y FIGY++YRDEP  SSLL DLDLF QP+SSA+TFLRIFT+  FMLDVE IY G
Sbjct:   55 EDRSQLPEVQPLVAYDVDKHEVASIYVKDALAGRESPTCIHDQNSLRALKLVRNKAWNQLLNICTIAHLMLPIVEIQRCLPCMGMQKIPESLDSNSLHTGWRPTLLGSMWLECLLCLLYVYDLYKVALAR-----------------------------------------------------------------------------------WSRVTLPFLFISRRTYLKHFVGGVIRVLPRMLPVAFLMSFVVFFYAFIGYVLYRDEPRSSSLLQDLDLFSQPSSSAMTFLRIFTSIPFMLDVEHIYAG 282          
BLAST of mRNA_Ecto-sp13_S_contig835.19710.1 vs. uniprot
Match: A0A6H5JGA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGA6_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 2.790e-56
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0
Query:  105 MAQSITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNVCTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRP 203
            MA+SITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALK FRNDAWNSLLNVCTLVHL LPMVEIQRCLSC+GPH+RSASLEDNTLFLG RP
Sbjct:    1 MARSITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALKCFRNDAWNSLLNVCTLVHLTLPMVEIQRCLSCVGPHKRSASLEDNTLFLGIRP 99          
BLAST of mRNA_Ecto-sp13_S_contig835.19710.1 vs. uniprot
Match: A0A836CJB1_9STRA (Ion_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.320e-12
Identity = 104/434 (23.96%), Postives = 157/434 (36.18%), Query Frame = 0
Query:   77 ATADVATAISRDLVTKAERWKLLAEEPLMAQSITPLLADN-------------VDKHEVAAIYV------------------------------------------RDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNVCTLVHLILPMVEIQRCLSCMGPHRRS-------ASLEDNTL--FLGWRPTWLGSLWIECAFCVFYT------------C------HLRQEALSRLGSVPVRNDDGGGGVGXGWSGVEGEEDEEEVE---------------RDRPQAEVYSLSALRPWQLARTCMVTVLSVSIVAKLFSHYIFGVTWFRQVFWRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFLIXXXXXXYGFIGYIVYRDEPHVSSLLSDLDLFDQPASSALTFLRIFTARSFMLDVEEIYGGRP 413
            A AD    IS +L  +  RW+ LAE+       T    D+             VD++E A+ Y+                                          RDA+ GR   A IH +R + A++  R      + NV     L+LP++E+     C     RS         L+ ++L  F+GWRPT LGS W+E   C F+             C      H    A  RL  V ++  D    +   W     E     +E                D P       S  +    A  C +    V+ V K    Y   +T+F            ++I+   YL+ F+     +LPR++PV          YG++GY+ +         L +LDLF     + LT LR+FT+  F+LD+E +Y   P
Sbjct:   44 AAADAIVDISAELAERRTRWRYLAEKADWLLGSTSHARDDAAAARKCQPQDPAVDRYEAASYYIKWVRGGRVRAGSHNSSGGWADFAHCMLVPAPWEGALPPGPLSRDAMHGRKIIAHIHTQRQLSAVRLARARPIILIFNVLCFFQLLLPLIEMPMGWECREGAVRSIQDGGVLCELDGDSLAWFVGWRPTMLGSSWLELPICAFFLFEIALLFMIRDRCSGRPFYHTNVWATMRLACVWLQLVDI---LIFLWGRYTYEGTALSMEFFRRARAGCSRAPRLADAPALRSARRSGQQRSGAAAKCALKQERVAAVRKR-GQYSRALTFF------------IYITNHQYLRLFVKGLWHVLPRLMPVATAAAFVVCLYGYVGYLAFNHTRAQPDALRELDLFRTLPGAMLTALRMFTSVVFVLDLEFLYRRSP 461          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig835.19710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FGS0_ECTSI3.310e-21388.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0T6_9PHAE8.750e-11152.73Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR41_ECTSI1.650e-7345.34Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A6H5JGA6_9PHAE2.790e-5693.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJB1_9STRA3.320e-1223.96Ion_trans domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 406..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 325..344
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 281..302
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 367..385
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 303..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 386..405
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..324
NoneNo IPR availableTMHMMTMhelixcoord: 312..329
NoneNo IPR availableTMHMMTMhelixcoord: 344..366
NoneNo IPR availableTMHMMTMhelixcoord: 286..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig835contigEcto-sp13_S_contig835:13044..20467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig835.19710.1mRNA_Ecto-sp13_S_contig835.19710.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig835 12771..20913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig835.19710.1 ID=prot_Ecto-sp13_S_contig835.19710.1|Name=mRNA_Ecto-sp13_S_contig835.19710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp
MPHSLSSYGLSDGRVSTTMATTTGGGGGGGLGQARSFTIPLVMPGNSGMP
RAKPASRAVVGRQPSTDEASWDAEEIATADVATAISRDLVTKAERWKLLA
EEPLMAQSITPLLADNVDKHEVAAIYVRDALAGRDSSACIHNERSIRALK
WFRNDAWNSLLNVCTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLG
WRPTWLGSLWIECAFCVFYTCHLRQEALSRLGSVPVRNDDGGGGVGGGWS
GVEGEEDEEEVERDRPQAEVYSLSALRPWQLARTCMVTVLSVSIVAKLFS
HYIFGVTWFRQVFWRHVILPFLFISRRTYLKHFLAATIRLLPRMVPVVFL
IFFITFFYGFIGYIVYRDEPHVSSLLSDLDLFDQPASSALTFLRIFTARS
FMLDVEEIYGGRPVRAHVRKYIRRRLTYVW*
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