mRNA_Ecto-sp13_S_contig835.19709.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig835.19709.1
Unique NamemRNA_Ecto-sp13_S_contig835.19709.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: D7FGR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR9_ECTSI)

HSP 1 Score: 766 bits (1977), Expect = 5.020e-273
Identity = 431/460 (93.70%), Postives = 435/460 (94.57%), Query Frame = 2
Query:  161 MAPGDAPDAERSGKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRAAEGSAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTSAHLKLPLTFPRSRKARASAK 1540
            MAPGD PDAERS    XXXXXXXXXXXXXXXXXXXXXXXXX       LRRAAEGSAGPILVSFANQTVP DM AVEFRMHEADDEEREGQKIVMGD GRMDYWGLNFGPGAESNDLCRFLVGVED +TGEL LHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDG  TATDGALAAVEEARRRFLPKMR EASTPEGVYSAGDIAG QEL+SMEREIDRAAEQIEGGMHQWAKDFAERPRESCP FVGKRL LLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGG A+YVRTKTLKNQLVVHALCLALVLEGCR+EIGVLAEDFRLSTAEARSMLRELGCTATNTSAHLKLPLTFPRSRKARAS K
Sbjct:    1 MAPGDDPDAERSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSREVVLRRAAEGSAGPILVSFANQTVPGDMSAVEFRMHEADDEEREGQKIVMGDGGRMDYWGLNFGPGAESNDLCRFLVGVEDGATGELILHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGDPTATDGALAAVEEARRRFLPKMRTEASTPEGVYSAGDIAGVQELESMEREIDRAAEQIEGGMHQWAKDFAERPRESCPHFVGKRLTLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGTANYVRTKTLKNQLVVHALCLALVLEGCRLEIGVLAEDFRLSTAEARSMLRELGCTATNTSAHLKLPLTFPRSRKARASTK 460          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A7S2WKU6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WKU6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.140e-25
Identity = 115/397 (28.97%), Postives = 170/397 (42.82%), Query Frame = 2
Query:  434 KIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLH---EAGHAYSLRQSVGDKDDN--IEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVG-GSAMSRVLGRALKEEEGGGAGGVDGASTATDGALA--AVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEG---------GMHQWAKDFAE-------RPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHA--SALLKGTPAQLSAKLDIPEIVLRRLLEKFSV-CEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIG---VLAEDFRLSTAEARSMLRELGC-----TATNTSAHLKLPLTFPRSR 1519
            K V G+     Y   N G     + L +F +G+ D+ T  L L    E G  Y+L Q V D D +  +   A  G+   +RK  LV  FGS +KK A++S+ AN++   +VVG G  M   + +     +      +D A       L   A  EARR+FLP   ++A+    VY A +IAG    D + R  D    + +          G HQW K            PR +  R+  K + LL                    +  FH+      L GT  Q++    IP  +  R L  F+V  E++G  G +    TK LK++  +H L L L+  G  M++G    L +D +L   EA  +L + GC     T    S  L +PLTFP+ +
Sbjct:  147 KTVNGEDRTCSYTASNGGRSNMDSRLTKFYIGIYDKETKSLVLQPSAEKGTVYALCQKVKDYDSSPLLASGATSGMTVAERKRFLVESFGSSRKKKAVKSQQANIVNISNVVGSGDVMMNAMEKQTNISQSNKK-AMDAARRGEQEDLVEIAYNEARRKFLPSFNEDATACFDVYDAREIAGGDAWDQLSRITDACVMKPKNHEFWLDSLMGRHQWVKSTKNVLNSVVGSPRSASNRYQIKTIQLL------------------NFLIAFHNKCFKLFLPGTEEQIAKSAGIPSTICSRFLTMFAVPSEERGREGFSI---TKQLKDKRTIHLLILYLLAHGKLMKVGSINTLCQDIKLEVTEAARLLVQAGCKCKKSTTGMISTSLTVPLTFPKPK 521          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A8H7PQX1_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PQX1_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 1.770e-14
Identity = 94/425 (22.12%), Postives = 203/425 (47.76%), Query Frame = 2
Query:  326 SAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLE--------YKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGA-LAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSME-REIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKL-DIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC-----TATNTS----------AHLKLPLTFPRSRK 1522
            ++GP LV+F   T P D    +   H +  ++++ QKI+ G++ ++++ G N+G  + S+  CR++V V D+    +TL EA    ++ ++V          A++G++        + + K+AL + FG+KK +  I+S + N ++  S+ G   +S      ++ E       +D A+ A     +   ++  +R +P     A+ P  +Y+  DI  A+EL+++  ++I +             ++  E+   +   FV  R++ +++   +  ++++  L+Y+ ++  ++    +L     +++  L + P  ++ R+LE+++       GG     RT  + ++LV + + L L+     +    LA D  L   +  ++L+ +GC     TA+  +          A L  P+TFP +RK
Sbjct:   25 ASGPTLVTFPG-TQPADDTLFDTYKHRSSGDDKKKQKIIAGETQKIEFVGKNYGADSTSDLPCRYMVAVYDKKDNTITLQEAP-VINMHRTVK---------ALKGIKSQVTAQNSFLEAKNALGDTFGTKKARQQIKSMERNEVKVESL-GQDVVST-----MQNE-------IDVAAQAVPTVDMIKEDQENQRPVPPYDAAATAPADIYNMDDIVSAEELNAVPIKDILKCTN---------LQELKEQLPFTLSEFVNTRVLSIINSKGKIDRKQVRVLVYISYLMAYYQMRPVLANKRDEINTILYNPPSAIVDRMLERYTT------GGR----RTPLMADKLVCYMMLLCLMANNYTVIPETLASDLSLKPTKTINLLKNVGCKVEMLTASQAAEFGIKGKVRRASLIAPVTFPVARK 406          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A0E9NJN0_SAICN (Uncharacterized protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NJN0_SAICN)

HSP 1 Score: 87.0 bits (214), Expect = 2.000e-14
Identity = 104/434 (23.96%), Postives = 187/434 (43.09%), Query Frame = 2
Query:  311 RAAEGSAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARR-----RFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERP-----RESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIP-EIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC----------TATNTS---------AHLKLPLTFPRSRK 1522
            R+ E +  P + +F   T P+++    ++  +          ++ G + R+++   NFG G E   LC + VG+ D+ST ++ +  A H +  R     K+ + +D   +  +Y++ ++AL   FG+KK K AI+S+DAN ++A      S +  V    + + +         A+T     +   E+ +R     R +P    E+ TP GVY    +    EL  +  +   A +         A D  +R      R+S   +V  RL  +L      +    L+LLY   + +  + +  + G    LS KL  P +I++   + +++    +  GG A  V T    ++++ +   + L L+   +++ +LA D  L  A  + + R LGC           A N S         A LK P  FP  RK
Sbjct:   24 RSGEDARTPYIATFPGVTAPQNLTFDAYKRKKPKKSSEAKDVVLHGSTDRIEFDAQNFGHGEEG--LCDYYVGIYDKSTNKVEIVPAPHVHVTRTVKALKNISRDDKGRQ--QYREARNALGEAFGTKKAKQAIKSQDANKVEA------STLDNVADAIVSDVK---------AATKN---MPTKEDMKREQEEDRPIPTPNVESETPAGVYPLDTVISPAELSIINVKPFLAPD--------LATDKKKREGLLPYRQST--YVTDRLTKILSSNAEKKDTHRLKLLYYASLLMAFYVNHRVAGKKDILSTKLGSPPQILVDGFISRYT----EQPGGDARPVVTAKRLDKVLCYLFVVCLHLDNFSVDMNMLAADLSLKAARTQELFRTLGCKVMGCTETQRVALNISKAEARNYKRAVLKCPPEFPEVRK 421          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: UPI000BA82FD4 (DNA-directed RNA polymerase I subunit RPA49-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA82FD4)

HSP 1 Score: 83.6 bits (205), Expect = 2.770e-13
Identity = 107/433 (24.71%), Postives = 199/433 (45.96%), Query Frame = 2
Query:  317 AEGSAGPILVSFANQTVPEDMGA-VEFRMHEADDEEREG------QKIVMGDSGRMDYWGLNFGPGAESNDL---CRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKD--DNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGD--IAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAK---LDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC---------TATNTS-AHLKLPLTFP----RSRK 1522
            ++ S+G  LV+F+N  + ++    + F+ +E+  E REG      +KI++ DSGR+ Y G NFG  +E + L   CR+ +G+ D++ G + ++     + +R S+ D    +  E+   +   Y ++ D L + FGSK+K+ A+ SR  + ++ G++    A  +V+    KE        V G  T     L   E      +P   + A+ PE VY+  D  +   +E   ++ E +  A+     +++W K+      E    +V      L+ LG  +  R   +L   + +  FH+   LLK     +  K     +PE     LL  F++ + +   G       + +K++++ +A+ +AL+L+G  ++   +  D +       +++  LGC         T T T  A L +PL  P    RSR+
Sbjct:   31 SDRSSGAYLVNFSNGKLKQNTKLNLHFKSYESS-ETREGLVLRRKRKIMVADSGRLQYVGYNFG--SELSHLGTACRYCIGLLDKNNGTMKVYST-QMFHMRPSLEDAGGFEETENPTEKSKSYTEKVDMLTSAFGSKRKRKAMESRVHHKVEEGNLE--LAADKVVENIDKE--------VSGIKTMKKNRL---ELEMPEAIPPQNRNATCPEEVYNVKDNKVISIEEYSGLDEEANLVADATLDQINEWKKE------EKYCHYV------LIHLGRLSCIRET-KLHQCKLLIYFHYLVTLLKLRYQDMKKKDPLPTVPEPYKHHLLNNFTL-KSENEHGTTFRSFPQRMKDKVIAYAMVVALLLDGFSVDFSDVHPDLKFPMNRLITIVLVLGCHVRSSKNPSTGTPTKIADLTIPLYTPGDKPRSRR 432          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A1S8VNV5_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VNV5_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 2.200e-12
Identity = 98/377 (25.99%), Postives = 173/377 (45.89%), Query Frame = 2
Query:  431 QKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSME-REIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASA-LLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTS-----------AHLKLPLTFPRSRK 1522
            +++V+ ++ +M+Y     G  + SN  C+++VG+ D+STGE++LH+A            K    +  + + +  + +   L   FG+KK+K AIR+ + N +    VVG   ++  +   ++E           A   T   + A   A R  +P    +AS P  VY   D+A +  LD++  +++ +A  ++E  + Q  ++F          +V +RL+L +   E+ +K R   L+YL  +  F+ A A  L   P  L     I   +   +L +FS  ++ G+G     V  K LK++L+ + L L L L    +    +A D  +S  +  S+ +ELGC                 A L LPLTF   R+
Sbjct:   60 RRLVVAETAKMEY----IGEPSASN--CKYIVGILDKSTGEVSLHDASPLTMTTIVKSQKQGPSKTISDKNMLARNQ---LGEAFGTKKRKKAIRALEQNKVD---VVGLHDVASAITDKIQETS---------ALLPTKAVIDATMLADRD-IPPCNVDASMPSEVYKLSDVAPSVVLDAINVKQLWKA--RLEADIQQSIQEFR------MTNWVTERLMLTVQ--EQKEKSRAKMLIYLSMLIRFYGAKAGELNKNPTSLFGNFPI---IGEHVLSQFSEWQEDGSGKRRLCVSLK-LKDKLLAYILVLCLHLNNFTINTAQIAYDLSISIGKIVSICKELGCRIETVRPAGSGKSGEKHAVLSLPLTFSLRRR 400          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: UPI001402797D (DNA-directed RNA polymerase I subunit RPA49 isoform X2 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402797D)

HSP 1 Score: 80.1 bits (196), Expect = 3.300e-12
Identity = 93/382 (24.35%), Postives = 171/382 (44.76%), Query Frame = 2
Query:  341 LVSFANQTVPEDMGAVEFRMHE---ADDEEREGQKIVMGDSGRMDYWGLNFGPGA-ESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLE---LLYLRHMCVFHHASALLKGTPAQLSAKL--DIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELG 1459
            LV F+N  +      VEF++H+    ++  ++ Q I+   + R+ Y G NFGP A + N LC++ VGV +E+TG++ +H A   ++++          ED   +   Y+++ D+L+  FG+ K+K A+ SR  N  Q G+     A+++     + ++         G S   + A     +    FLP    +A  PE VY   DI    +  +    I    E ++    +     AE    S   FV    +  L    +++K R  E   L YL+ +   H+    LK    +    L  D+ ++V   L++KF+V       G    +   ++K ++V + + LAL +   + ++  L +D ++S      + R +G
Sbjct:   23 LVQFSNGKLTNSEN-VEFQLHKNIHKNNPRKKNQLILSAATDRLTYVGNNFGPSALKCNSLCKYFVGVLNENTGKMEVHNA-QLFNMQPFFPGDSVTKEDTNEKEASYREKVDSLIEAFGTIKQKHALNSRRLN--QVGNETLQEAVTKAAENIIDKK---------GISALANEATQFESQFESAFLPPCHADADKPEDVYKFEDIISTADYQA----IKPCCEPLKINTAEDILKLAETGNYST--FV----LESLKSAPQDEKSRDHEINCLFYLQILIKLHN----LKKHEFKHKGSLGSDVADVVKNSLMKKFTVLTYNN--GRVQNIIPISMKAKIVAYVIALALHINNFQTDLTYLQQDLKISENRILDVARAMG 375          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: UPI0019559963 (DNA-directed RNA polymerase I subunit RPA49 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019559963)

HSP 1 Score: 79.3 bits (194), Expect = 5.660e-12
Identity = 97/362 (26.80%), Postives = 163/362 (45.03%), Query Frame = 2
Query:  422 REGQKIVMGDSGRMDYWGLNFGPGA-ESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDK--DDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVI------QAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWA---KDFAERPRESCPRFVGKRLVLLL--DLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCT 1465
            ++ ++IV+ +S R+ Y G NFGPG+ +SN+LCR+ VGV D+ST ++ +H A     L    G+   DDN +        Y+Q+ DAL+  FG+ K+K A+ SR  N +      QA ++   + + R    AL+ E       V+ +   T+  L         FLP     A  PE VY    +    E D+++          E GM   A   +D  +   E  P+ V   L  L   D     Q R    L +L  +     + +   GT      +   P+I++ ++++ F+V E    G + + V T +++ +LV H L L L +      + +L  D  +S  +   + + +G T
Sbjct:   48 KKNRRIVVAESDRLPYVGSNFGPGSSQSNNLCRYFVGVLDKSTMQMKVHNAQLFNMLPLIPGESTGDDNTK----HPETYRQKVDALIEAFGTTKQKRALSSRRLNEVGNEMLQQAVALAASNVIDRKGMDALRNE-------VNESEAKTETPL---------FLPLCNTAAEKPEDVYPFDQLLSPIEFDALK----------EVGMKMAALTPEDLQKMRDELGPQTVLAHLESLPTEDAARDRQSRCAWYLSFLIKVSQQKRSVSFKFGT------ENGCPKILINKVMKNFTV-ESFHDGRLRNTVST-SMRLKLVSHCLALLLHMGDQTANLTLLHRDMDISDNKMLELAKAMGLT 371          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A0L0HSG0_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HSG0_SPIPD)

HSP 1 Score: 78.6 bits (192), Expect = 9.410e-12
Identity = 94/357 (26.33%), Postives = 171/357 (47.90%), Query Frame = 2
Query:  422 REGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGD-KDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARR-----RFLPKMRKEASTPEGVYSAGDIAGAQELDSME-REIDRAAEQIEGGMHQWAKDFAERPRESCPR-FVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKL--DIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC 1462
            R+ ++IV+G + +++Y G N G    +   CR+++GV D++T +LTL E+  A+ +  +V   K    +  A + +     ++AL   FG+KK++ AIR+ + NV+    V G + +  V+  A+ E+          A+T     L + EE R+     R +P    +A +P  VY+  DI    EL ++  ++I RA           A D  E      P  +V  ++ + L +  ++   RM  L+YL ++  FH      K   +Q   K     P+IV  RL+ +F+  E +   G   Y  +  L+++L  + L L L+L   +++   +A D  ++  +   + +ELGC
Sbjct:   58 RKKRRIVVGQTSKLEYVGDNAG----NKRYCRYVIGVFDKNTKQLTLRESD-AFRMATTVKTLKRHESKHIAEKNM---LARNALGEAFGTKKRRQAIRALEKNVVD---VRGMAEVEDVIKGAIDEK----------AAT-----LPSREEIRQEAQLDRCIPPYNLQAQSPADVYNVEDIITPAELQAIPFKQIWRARS---------ASDVKELLEPISPTSWVWDKIHVCLQV--KDDSVRMRRLIYLAYLMKFHGFKD--KDLNSQAVGKRLGGAPQIVAERLMNEFT--EFQEDEGRRRYRMSPKLQDKLRAYILTLCLILNDFKVDASQIARDLGIAVNKMNDIAKELGC 373          
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A2R8Q7A0_DANRE (Polymerase (RNA) I polypeptide E n=2 Tax=Danio rerio TaxID=7955 RepID=A0A2R8Q7A0_DANRE)

HSP 1 Score: 78.2 bits (191), Expect = 1.350e-11
Identity = 92/402 (22.89%), Postives = 177/402 (44.03%), Query Frame = 2
Query:  320 EGSAGPILVSFANQTVP--EDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGA-ESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVI------QAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRL-VLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLD----IPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTSA 1483
            E      +V F+N  V   E++    F+   A +  ++ ++IV+ DS R+ Y G NFG G+ +SN++C++ VGV D+ T ++ +H A     L    G+  +   +   +   ++ + DAL+  FG+ K+K A+ SR  N +      QA +    + + +    AL+ E       V      +D AL         FLP     A   E VY    +    E +S+ +E+      +       ++D  +     CP+ V K L  L  D  +R+++ R          C ++ +  +      ++S K       P I++ ++L+ F+V E    G + + V + +++ ++  + L L L + G    + +L  D  +S  +   + + +G T +  +A
Sbjct:   12 ETEQNTFIVKFSNGNVKNAEELDFTVFKHSNASNPRKKNRRIVVADSDRLPYVGSNFGSGSLQSNNMCKYFVGVLDKQTMQMKVHSAQLFNMLPVIPGEATEAESE--NQPSTFRDKVDALIEAFGTNKQKRALSSRRLNAVGNETLHQAVAQAASNIIDQKGVEALRNE-------VIETEAQSDAAL---------FLPPCNANADKLEDVYPFDQLLTPNEFESL-KEVGAKYATLS------SEDLQKMRDNHCPQTVLKHLETLSKDEADRDRQCR----------CAWYLSFVIRASLQKRISFKFGSDDGCPRIIINKVLKNFTV-ESFHNGSLRNTV-SMSMRMKMASYCLALLLHMGGQTANLTLLHRDMSISENKMLEVAKAMGLTLSRQNA 376          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FGR9_ECTSI5.020e-27393.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WKU6_9STRA2.140e-2528.97Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A8H7PQX1_9FUNG1.770e-1422.12Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A0E9NJN0_SAICN2.000e-1423.96Uncharacterized protein n=1 Tax=Saitoella complica... [more]
UPI000BA82FD42.770e-1324.71DNA-directed RNA polymerase I subunit RPA49-like i... [more]
A0A1S8VNV5_9FUNG2.200e-1225.99Uncharacterized protein n=3 Tax=Batrachochytrium s... [more]
UPI001402797D3.300e-1224.35DNA-directed RNA polymerase I subunit RPA49 isofor... [more]
UPI00195599635.660e-1226.80DNA-directed RNA polymerase I subunit RPA49 n=1 Ta... [more]
A0A0L0HSG0_SPIPD9.410e-1226.33Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A2R8Q7A0_DANRE1.350e-1122.89Polymerase (RNA) I polypeptide E n=2 Tax=Danio rer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig835contigEcto-sp13_S_contig835:1134..9281 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score770.8
Seed ortholog evalue3.7e-220
Seed eggNOG ortholog2880.D7FGR9
Preferred namePOLR1E
Model size2104
KEGG rclassRC02795
KEGG koko:K03005
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG ModuleM00182
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0001179,GO:0001188,GO:0001650,GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006360,GO:0006361,GO:0006362,GO:0006363,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008361,GO:0009058,GO:0009059,GO:0009303,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0022607,GO:0030880,GO:0031974,GO:0031981,GO:0032535,GO:0032774,GO:0032991,GO:0034062,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042790,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0055029,GO:0060255,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0090066,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons9
EggNOG free text desc.transcription by RNA polymerase I
EggNOG OGsKOG4183@1,KOG4183@2759
Ec32 ortholog descriptionRNA polymerase I associated factor, A49-like
Ec32 orthologEc-04_001110.1
Cds size1404
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig835.19709.1prot_Ecto-sp13_S_contig835.19709.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig835 1273..8720 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464104.791736-UTR-Ecto-sp13_S_contig835:1133..12721681464104.791736-UTR-Ecto-sp13_S_contig835:1133..1272Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig835 1134..1272 +
1681464104.9021907-UTR-Ecto-sp13_S_contig835:8720..92811681464104.9021907-UTR-Ecto-sp13_S_contig835:8720..9281Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig835 8721..9281 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464104.8044083-CDS-Ecto-sp13_S_contig835:1272..15921681464104.8044083-CDS-Ecto-sp13_S_contig835:1272..1592Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 1273..1592 +
1681464104.8152635-CDS-Ecto-sp13_S_contig835:3692..37491681464104.8152635-CDS-Ecto-sp13_S_contig835:3692..3749Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 3693..3749 +
1681464104.826001-CDS-Ecto-sp13_S_contig835:4150..43481681464104.826001-CDS-Ecto-sp13_S_contig835:4150..4348Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 4151..4348 +
1681464104.836356-CDS-Ecto-sp13_S_contig835:5200..53041681464104.836356-CDS-Ecto-sp13_S_contig835:5200..5304Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 5201..5304 +
1681464104.8473916-CDS-Ecto-sp13_S_contig835:5665..58591681464104.8473916-CDS-Ecto-sp13_S_contig835:5665..5859Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 5666..5859 +
1681464104.858306-CDS-Ecto-sp13_S_contig835:6420..65491681464104.858306-CDS-Ecto-sp13_S_contig835:6420..6549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 6421..6549 +
1681464104.8721142-CDS-Ecto-sp13_S_contig835:7070..71901681464104.8721142-CDS-Ecto-sp13_S_contig835:7070..7190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 7071..7190 +
1681464104.8815958-CDS-Ecto-sp13_S_contig835:7774..79691681464104.8815958-CDS-Ecto-sp13_S_contig835:7774..7969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 7775..7969 +
1681464104.891172-CDS-Ecto-sp13_S_contig835:8633..87201681464104.891172-CDS-Ecto-sp13_S_contig835:8633..8720Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig835 8634..8720 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig835.19709.1

>prot_Ecto-sp13_S_contig835.19709.1 ID=prot_Ecto-sp13_S_contig835.19709.1|Name=mRNA_Ecto-sp13_S_contig835.19709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=468bp
MGRKRASMAPGDAPDAERSGKKSKKRRREEGLPAGGVVAAGAGGGKRVSS
SREVVLRRAAEGSAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKI
VMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSL
RQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQ
AGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRF
LPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKD
FAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASAL
LKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQL
VVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTSAHL
KLPLTFPRSRKARASAK*
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mRNA from alignment at Ecto-sp13_S_contig835:1134..9281+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig835.19709.1 ID=mRNA_Ecto-sp13_S_contig835.19709.1|Name=mRNA_Ecto-sp13_S_contig835.19709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8148bp|location=Sequence derived from alignment at Ecto-sp13_S_contig835:1134..9281+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGAATCAAGAACCTTTTTTGAGGGGGGTACAGAAACTCGGCCGCCGTC GCGGGCGCGACAAGTATCATGATGTGTACGGAGCAGCAGGAGACACAGAC CCGCATTAGGGTAACGAGCGACCGAGGACACCTCTCACGATGGGGAGAAA GAGGGCATCGATGGCGCCGGGCGATGCCCCTGATGCGGAGAGATCCGGCA AGAAGTCAAAGAAGAGACGAAGAGAAGAGGGCCTACCGGCGGGAGGTGTT GTCGCTGCTGGTGCTGGTGGTGGGAAGCGGGTGTCGAGCAGCAGAGAGGT GGTGCTGCGCCGTGCTGCGGAGGGCTCCGCGGGTCCGATACTAGTATCGT TCGCCAACCAGACCGTCCCTGAAGACATGGGCGCGGTTGAGTTCCGGATG CACGAGGCAGACGATGAGGAGAGGGAAGGGCAGAAGATTGTCATGGGCGA TAGTGGCAGGTATGCATGGTTGGTTGGTTCGAGGATCATCCGCAGCAGGT TCAAACATTGAAACATTGATCCGAGGAGCGAGCGCAGGGGTAGGGGCACA TCAGCTGTTGCTCATCATTGATTGAGAGCTTCGACAACAGCAGTGCACTC TTGCACCACTTTTTTTTGTTCAAAATACCCCCTTTTGCAGCCACTCCAAA GTACACACAACAGCATGGCCCTTGCTGCGGCTGTACCTCTGTACCTCTGG TACGTAGAAGATAGAGCACAAAAGATAAAGCACCCCCTGGGCTGATTTCA AAGCTCGATTACAACTCTATGCCGGAAAGTATGGCAGCGTTGGAACCGTC TCGCGGAGAGATTTCCGAAAACGTATGGATGTCGTTTGACGTAGACGTCC TCTTCGTCCTCGAGAAAGAGGGTGAGTGATATCTTACGTCATCTACCGCA TGTCTTCCTGCGAGATTCGGGAGTGTGGTGTGTGGTGTGATGCAGTGGAA AGCAGCGCAGTTTCCGCCATTCGGACAGCGGGAGAAAATTGTCTAACACA GCAGCTGCGCCGGCTCTTTCGTGCCTTAATTCAGAGACCGGAACGGTTTT TAACGCGAAGACAAAAACCTAGAAGGCAATGAACCACAACAACAACAACC GCCGAGCCTGTGCCGGGAGGTACCGTAGGTTGCGGAAGATGTCACACCCC CTGGACCGATTTTCCAAGCTCGATTACTCCACAGCAGAAACAGTGGCGGT GCCGAGTCTGGTGGCGTTAGAACCGTTCCGTCGAGAGCTTTCCGAACACG CACCATTTGATTTGGGCATCCTCTTTGTCGTGGAGTAATCGATCCGGGTG TGGTTCCTCCCGTATACGACAGAAGATAACACACCCCGGGCCGACTTTCA ATGCTCGATTGATCATTGTACATAGCAGCAAGAGTTGCAGCGCCGAAAAC GGCGGCGTTGAGGTCGCCTGGTCGAGAGCGCTCCGATAACGTATCGTTTC ATTTGTGCATCCTCTTCTTAATGGAGTAGTCGAGCTTTGAAAATCGATCC AGGGGGTATGTTTTCTCGTGTAGTAATAGGCATGCAACGAACGGAACATG GGTGCGCATCTATCCTTGTTGGTCTATAGACGAGTGCAGTCTTGTTCCAG AGGTGTCCAATCCAACCCCCATCTCCACTAGTATCGCAAGGTTTGGATCG CTTGTTTTTACGCACGTACACCAACGCCTCCGCCCGCGCCGTTTTTCTTT TTGGGCGTTATCACTTGAGTGTGGTACCGTAGGAGGCGGGGAGATGGCAC TCCCCCTAGACCGCCTCTCAGAGCTCGATTTCTCCATGACCATGATTGTG TGTACCGTACCGTATACCGTACCGTGGTATTCCGTGAGAGGCGGAGAGAT GGCACCCCCTCCCTAGACCGACTCTCAAGCTCTATTTCTCCACAACGACG ATTGTTTGCACCGTACCGTATACCGTACCGTGGTACTCCGTAAGAGGCGG AGAGATGGCACCCCCCCCTAGACCACCTCTCGAAGCTCTATTTTTCCTCA AACCTAGTGGATGCTGAACGAGCCCGAAGCGTTAACGGAAAATCGTCGAC GAGGTGCTTCCAAAACCACCATTGATCGTGTTGGCACTAATAATATTTTA TCTTGGTTGTAAAATAATCGAGCTTTGGGAAGCGGTCTCCAGGGGCTGTG CCCATTATTGCGGTACATGAAGCAACCAACATCGCCAAGTGCACACATAT CCAATCCCCATCTCCGAGAGTATCCAACCCACGTCACAAGTTTAGTTACC GAAACTTTGGATCGCGTGTTTAACGTACGTAGGAGGCGTATTGGGTGTAA CCGATGCAGCAGTGCTCCGCAAGTGCACACATGTCCACCCCCCACCTTCA CAAGCACCCAAGTTTCGGATCGCTTGTTTAACGCGCGTAGGCGCCCGCGT CCGTTGGACCAGTTCGAATATTGAGAGGAGTACCAGAGACTGTTAAATGT GAAGACAGCAACAAAATGAATACGCCGCCGCAACCACCATCCTACGCCGC TCCTGTGTTAACGTTTGGACCCGGGACGTGGTGTTGCGTGGTATGGTGTG GTGTGGCAGGATGGACTACTGGGGACTCAACTTCGGACCGGGGGCGGAGT CTAACGACCTGTGCAGGTGACGATTGGAGAGTCTCTGCTACCGCCTTTCT TTGCCTTTCGTGGCACCCGCCGTGTTAAGATGAAACTACTACGACCCTCT TGCTGGCGGTGGCACCCGTGTTGTGTGTGTGTTTTGTAGTGGTTGTGTCT TCGGAGCTTCAGCCACGCAGTATTATTGTTTGCCGTTTTTCCAAAGTTTT ATCGTGGGCTGGTAGTAGATTTTCGTTTCGTGTGTTTTTGTATACAAAAC ATTGCTCGTTCTAAAGTGTTCGTGAGAGAGAGTTTTTTTGTCATGCATTT TGTGCTTATTTTACACTCAACGAAGAGGAAATCATTCGCCATTCCGAAGG GTTTCTCGCCGGACGCAGTTACTACATTTATATGTTTTTCTGGTAATCGT TGGTCATTCCATGGAAGGTTCCTGGTGGGCGTGGAAGACGAATCCACCGG AGAACTCACACTCCACGAAGCGGGGCACGCCTACTCCCTCCGTCAGAGCG TGGGGGACAAGGACGACAACATCGAGGACTTCGCCATGGAGGGGCTGGAG TACAAGCAGAGGAAGGACGCGCTGGTGAACCAGTTCGGCAGCAAGAAGAA GAAGGCCGCCATCAGGTCTGTTTTTCGTTGAAGTAAACTTGTTGGGAAAA AACAGATGCGATCTGGAAAGTCGGGTTGGGGTTAGGGATAGGAGCTGCGT ATCCCCTCCCTGTTCTATTTTCAACGATAAACTTAATTTCTCGTGAAGAC GTTCCAGGTGTTCTGTCATTCGTCCGAGCATGTCGGTATGTGTTTTGTGT GGGTTACTTTTGTTAGCATCGACCGCGCTACAACCGGCTGAGCAATGAAA TTTCGTCATTCTCAGTCCCTTTGAAAGCACAAAATGCTTGTGAAGGTCAT GATCTGGGACCCCGTGAGGGGGCGTCATGTGGGAGGCCATGCTACCCTCC GAATGATAGACAGATACCGTCGCAATAACAGACGAAAACTGTGTGAGTAT GCGTGTTTCTAAGTTAGCATCGACCGCGCTAATCGGCTGACCAATGAAAT GACGCCAGTCTTGTAGGGGGATACAGAACACGAGCATCAAAGTGCGTGAG TTTGTGCATGTCTTGTGTTTTTTTTGTGTGTCACCAACGGATGATAGCAC TTGAGTCCTCCCCGATCAACGAAAACCGAAGATCGATACGGGTATAAACA GGCGTTCGCGAAAAAACCAACCTCCTCATTTCTTTGCTATGGACGACAAC AAATTGTGAATCAGTCAATACATTTATTTTTTTGATATCGACCACGCAGG TGACCCATGAACGTAGACTTCCTTACGAGTGTTCGGTGCGCTTTCTTTTA TCTTCTTTTTTTTTCTCGTCACCTGTCAAGACGAGGCCGGCTGACCCATG AAGATACGCTTTTAAATTCATGCGCGTGTTAATGTGTGTTTTCCTCTTCT TTTTTTTTTCTCGTCAGATCTCGAGACGCCAATGTGATCCAGGCGGGTTC GGTGGTCGGGGGCTCCGCCATGTCGCGCGTTCTGGGTCGGGCGTTGAAGG AGGAGGAAGGCGGCGGGGCTGGTGAGCTGTTGCTGTTGCTCTTGTTGTTA TTTTCATGGTGGTGATGGTTTTGGAGGAGGTGATGGTAGATGTTGCCGCC GCCGCTTCTGCTACCTGTCCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGC TGTTGCTGTTGCTGTTGCTGTTGTTGTTGTTGTTGCTGCTGTTGCTGTTG CAGGTTTTGCTCGTGTTGCTTTTATGGTGGCGGTGGTGTGGTGGTGGGTG TTGCTGTTGCCACCGCCGCCGCCGCTGCTGCTTGAGCTGTTTATCGCTGC TGTTGTCAATGTCATCACTGCTCATTAATATGAACGTGTGCTAAACTTGC GGGCCCTTGCTGCGTGCTAACTGTACCCGCAGGCGGCGTTGACGGCGCGT CCACCGCTACGGACGGCGCCTTAGCGGCGGTGGAAGAAGCACGCCGTCGT TTCCTCCCCAAGATGCGGAAGGAGGCGTCCACGCCGGAGGGGGTGTACTC GGCCGGCGATATCGCGGGCGCCCAGGAGCTGGATTCCATGGAGAGGGAGA TCGACAGGGCGGCTGAGCAAATTGAGGTGGGTGGGGCGGCAGTACGATCG TTTTAGTGGTGGGTTTCGAGGTTTCCGGTGGCGATGATGGTCATGGTGGC AGTGGAGTGATTTCGATTGTGTGGCGATGTTGAGAATGCCAGTAGCGCCG ACAGAGATGCCGGGCCGAAGCAGACGCAGCTTGAGAGCTGGCGCCGGCCC TGGATGAGACTTGATCACGACTTCCGTGTGGAGGGTATAGCGTAGTGGTG GCCGGGGGGGTGGACTGTGGATATGTGGTGGATGGTGTCGTACTCATGGT GGTGGTAATGGTGGTGATGGTCGTAGTTGAGCGGTTTCGATTGTGCGGTG GCGGCTATGGGGGATGTAGTCACGATCGACCGAACAAAATTGCGACAACT TCACAGTGACCCACTTCTGTTACATGTCGAGGACCATCTAATGCTCCAAT CGACGGTTTCAGCCTCTCTACGCCGTACGCTGTATTGTTGCCCGGACACA GATGTCCCCCGGCATACACGGATACCCCCTTCCCCTGACACATCTGACTT GGTCTCGGCGCTTATGTTTTTCTTTCCCTCGCTGCAGGGGGGTATGCACC AATGGGCAAAGGATTTCGCGGAGCGCCCTCGCGAGAGCTGCCCTCGGTTC GTCGGCAAGCGGCTGGTGCTTCTCCTGGACCTCGGGGAGAGGAACCAGAA GAGGAGGATGCTCGAGGTGCGCTTGTGGTGTTGCCGGCACCGTAGCTCTG AAAACAGTTGGTGTTGTTGCTGTTTTCTTCGCTTTGCTCTTGGTTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTATTGTTGGCAACATC AACACTTACGGCCAAAAGGTGACAGCAGAGGTGTGTCTCTTGGTTTGCTG CTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGCT GCTGCTGCTGTTGGCGACATCAACTTAAACGGCCAAAAGGTGACTGTAGA GGTGTGTCTCTTGGTTTGTTGTTGTTGTTGTTGTTGTTGTTGGTAGTGGC AACATCAACTCTAACGGCCAAAATATGACAGCAGAGGTGATCAGCGAGCA ACATCCCGACAGCAGAGACCACGCAACAACAGACAACCGAACACGCCTGC CCGACTAACTCACGTCACATGCTTACCCTTGCTTGTGATTGTCGTTCCCG CGCACGGCGATGCTGCCGCACCGCTTTGTTATCGCAGCTGCTATACCTGC GGCACATGTGCGTGTTTCACCACGCTAGCGCCCTGCTGAAGGGCACCCCG GCGCAGCTGTCCGCCAAGCTGGACATCCCCGAGATCGTCTTGAGGCGTCT GCTCGAGGTGGGCCATGAGTTCATCGGGTTCTATCCGTCCGTGCTATCTC TCCTTTTTTTGTCTTGAGTTCGTTTGTGTAGGTTTGCCTCATATACCATT GAAGATTTGAAGACTCCACCAGTCGTGGCCCCCCCTGTATAAGCCCGCAA AGAGTGCCGGGCGATTTCACCGACCTGATACGGGGCGACCGCCTTTTTTC TGCTGGCGTCAGGGCGGAGCTTCAATAAACGTTCAAAGCGAACCTCCAAG CACGAAGTGCGAATAAAACGATACAGCTACTGTCATGCATGTGTATGGGG AGGGATTTCTACCGCTGAGTTTACCAAAATGTGCCCCCCCCATGGCCAAT GGTCTAGCCGCTAATGCATGCAAAAGATGAGTACGCCTCCCCCACAGCAT GCTGCGCCCCGGCTTGTTAGGGATGCAAGGTCAATGGTCAAAGGACAACG GCATGTGCGGCTATGAGTACCCGTCCCCACTGCCAAGAACGGCCAACGCG CCATCGAATACAGTACTCCGCTTGAAACCGTGTCATGATCGATATTTGTG TGTGTGTGTGTGTGTTTTTTTTGCGGCATCTCGGCCTGCAGAAGTTCAGC GTCTGCGAGAAGAAGGGGGCGGGCGGAATGGCCAGCTACGTCCGCACCAA GACCCTCAAGAACCAGCTCGTGGTGCACGCCCTGTGCCTCGCTCTCGTGC TTGAGGGGTGCCGCATGGAGATCGGTGTCCTGGCTGAGGACTTCAGGCTG TCTACCGCGGAGGCTAGGAGCATGCTCCGCGAACTGGTGAGGCGGGAGGG AGGCTCACTCAACGCCTAGATTATTGGTTTTGGTTGTGTTTGCCTTGCTT GTGTTGGTTGTTGGAGGCTCAATCAACGTCTAGATTTTTGGGTTTGGTTG TATTGACTTTTGACTTCGCAGTGTGTTGCTTTTGTTGTCTTGGCGACAAC CGTGCAAGGCTGGATTTCTCTGAATATTACCGGTTACCTTTCGTGAGTGA GGCAGACTCCGTGGACGTCAAGGCTTGTGCTTTGGGTCGTTAATGTTGTT TTCACATTAAAAAAAACATTTCCATCTCTCTATCCAGTACCTTCATCTGT CCGTACTAGTCTAACACTGTACGAGGTCTCTTTCCGTGGTCGCAGGCTAA CTTACCCTGAAAAAAACGTATACCACAACAGAAGGCGTGGTTTTTCCTAA TCTTCAAGTTTTGCGCAACGCGGCCTGCAGTGGTCTTTCGGCCAAATCAA CAGCCGTACCAGGGAAGATTGAGTTGCCTACGCCAAGACTTGGATTGTCT CTGAATACGAGATTCCGCCTTTACACCAATCCCAATGCCAACTCGTACCC TTCCCAACATGACGCTCGAATAACGCCACCCCCCCCCCCACCCCACCCCC CTCTTGTTTTCCACTTGTTCGGTACGATGTGTTTTCGTTCTGTGTGACAG GGCTGCACTGCGACCAACACCAGCGCGCACCTCAAGCTTCCGCTCACGTT CCCTCGGTCCCGCAAGGCCCGGGCCAGCGCCAAGTAGACTGGCTCCACGA CTGCGTTCAACAGGCACTTTTCTGCTGTAAGCCCGATGCGCCGCGGCAAC GAGTAGACGATACGACGGCACGCGACGCGCTTTTTCTGCCGCAAGCTCGA AACAAGTACAAAACGGAGTCGAGCGGCGGCAGCACGGCAGCACTGTCGGA TTACCGGGACGTCGAATGCCCACCAGTGGCAGCGGCAGCGCGAGTAGTGT GTCATATTTTTATGAGGGGTTGCCGTGTTTGATTTTTTTTTGTTGTGGTG CGCGTGTTTCGGTTGGTGACTCTCGCCCAACGTCTTGATGATGAGCGGTT TTTATGCGAGGTACAAGACGGCTTGACAGGCGGCGTCGGAGGGTGTCCAC GCCGCCGGAGGGTGTCCTGATGTGTAGGGTACATGAAGCTTTGAATTGTT CTACAAATAAGCCAGTGGTGCGGTTCCCTTCCCGTCTACAGCAGTGTGTG CACAACGTTAAGAGAATTTTGACGTCAATATATTTTTGACGTGCCGACAT CATCACAGCGTGATGGGGTTTTCTTGGAATGTTCCGATGTGTGGCGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig835:1134..9281+

>mRNA_Ecto-sp13_S_contig835.19709.1 ID=mRNA_Ecto-sp13_S_contig835.19709.1|Name=mRNA_Ecto-sp13_S_contig835.19709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1404bp|location=Sequence derived from alignment at Ecto-sp13_S_contig835:1134..9281+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAGAAAGAGGGCATCGATGGCGCCGGGCGATGCCCCTGATGCGGA
GAGATCCGGCAAGAAGTCAAAGAAGAGACGAAGAGAAGAGGGCCTACCGG
CGGGAGGTGTTGTCGCTGCTGGTGCTGGTGGTGGGAAGCGGGTGTCGAGC
AGCAGAGAGGTGGTGCTGCGCCGTGCTGCGGAGGGCTCCGCGGGTCCGAT
ACTAGTATCGTTCGCCAACCAGACCGTCCCTGAAGACATGGGCGCGGTTG
AGTTCCGGATGCACGAGGCAGACGATGAGGAGAGGGAAGGGCAGAAGATT
GTCATGGGCGATAGTGGCAGGATGGACTACTGGGGACTCAACTTCGGACC
GGGGGCGGAGTCTAACGACCTGTGCAGGTTCCTGGTGGGCGTGGAAGACG
AATCCACCGGAGAACTCACACTCCACGAAGCGGGGCACGCCTACTCCCTC
CGTCAGAGCGTGGGGGACAAGGACGACAACATCGAGGACTTCGCCATGGA
GGGGCTGGAGTACAAGCAGAGGAAGGACGCGCTGGTGAACCAGTTCGGCA
GCAAGAAGAAGAAGGCCGCCATCAGATCTCGAGACGCCAATGTGATCCAG
GCGGGTTCGGTGGTCGGGGGCTCCGCCATGTCGCGCGTTCTGGGTCGGGC
GTTGAAGGAGGAGGAAGGCGGCGGGGCTGGCGGCGTTGACGGCGCGTCCA
CCGCTACGGACGGCGCCTTAGCGGCGGTGGAAGAAGCACGCCGTCGTTTC
CTCCCCAAGATGCGGAAGGAGGCGTCCACGCCGGAGGGGGTGTACTCGGC
CGGCGATATCGCGGGCGCCCAGGAGCTGGATTCCATGGAGAGGGAGATCG
ACAGGGCGGCTGAGCAAATTGAGGGGGGTATGCACCAATGGGCAAAGGAT
TTCGCGGAGCGCCCTCGCGAGAGCTGCCCTCGGTTCGTCGGCAAGCGGCT
GGTGCTTCTCCTGGACCTCGGGGAGAGGAACCAGAAGAGGAGGATGCTCG
AGCTGCTATACCTGCGGCACATGTGCGTGTTTCACCACGCTAGCGCCCTG
CTGAAGGGCACCCCGGCGCAGCTGTCCGCCAAGCTGGACATCCCCGAGAT
CGTCTTGAGGCGTCTGCTCGAGAAGTTCAGCGTCTGCGAGAAGAAGGGGG
CGGGCGGAATGGCCAGCTACGTCCGCACCAAGACCCTCAAGAACCAGCTC
GTGGTGCACGCCCTGTGCCTCGCTCTCGTGCTTGAGGGGTGCCGCATGGA
GATCGGTGTCCTGGCTGAGGACTTCAGGCTGTCTACCGCGGAGGCTAGGA
GCATGCTCCGCGAACTGGGCTGCACTGCGACCAACACCAGCGCGCACCTC
AAGCTTCCGCTCACGTTCCCTCGGTCCCGCAAGGCCCGGGCCAGCGCCAA
GTAG
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